| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933109
Identifier: 187933109
GI number: 187933109
Start: 2788291
End: 2788812
Strand: Reverse
Name: 187933109
Synonym: CLL_A2670
Alternate gene names: NA
Gene position: 2788812-2788291 (Counterclockwise)
Preceding gene: 187934102
Following gene: 187933105
Centisome position: 73.38
GC content: 22.22
Gene sequence:
>522_bases ATGAGAAAATATTTTAAAGTAATTACAATAATTATAGCTGTAATTTTTTTGAGTGGTTGTAACAATATAAAGCTTGAAAA ATATACTGGAGAAAATTTAAATGTTGGAGTTATAGGTGAAATACCTGAAATCAGAGAAGATAATGTTATATTTAATAAAA TTACATTTAAAGATTTAGAAGAAAAAAATACATTAAGTAAATATGATGCAATTTTTATTACAAAGGATAATTTGATAGAG GCATCAGAAGGGAAATATTCAAGTATCTACAAAGAAGGAATAGTTCCATTCTTTTTTATTGAATCTACAAAAGGAGATAT ACCTTTTATATATGAAGAATTATCATATGAAGAAGTACCACAGCAAGGTAATCCACCATTTTATGCAGTAGGTATATATA TAAAAGATAGTAAATTATCAAGTATTGAATATGGATTATATAATGATATAAAAAATAAGAAGAATATTGAAGATGTATAT TCAAGAATTTTTAAAACTATTTCAGAAAATAAAATTTATTAA
Upstream 100 bases:
>100_bases GATAACGCTTACTATCTGAATATGTGCAAAAAATATAACTGTAATTATATTCTGATTGATGATTGTTATCAAGTGGAAGC TAATTTAAAGGATATAATTA
Downstream 100 bases:
>100_bases AGATAAAAATCAAGTAATTCATTTCATAATTAATGAGATACAAATAGTAATTTGTAAGGTTAGGATTTTTATAATATTAT GATGGATACTTAAAAATTCC
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MRKYFKVITIIIAVIFLSGCNNIKLEKYTGENLNVGVIGEIPEIREDNVIFNKITFKDLEEKNTLSKYDAIFITKDNLIE ASEGKYSSIYKEGIVPFFFIESTKGDIPFIYEELSYEEVPQQGNPPFYAVGIYIKDSKLSSIEYGLYNDIKNKKNIEDVY SRIFKTISENKIY
Sequences:
>Translated_173_residues MRKYFKVITIIIAVIFLSGCNNIKLEKYTGENLNVGVIGEIPEIREDNVIFNKITFKDLEEKNTLSKYDAIFITKDNLIE ASEGKYSSIYKEGIVPFFFIESTKGDIPFIYEELSYEEVPQQGNPPFYAVGIYIKDSKLSSIEYGLYNDIKNKKNIEDVY SRIFKTISENKIY >Mature_173_residues MRKYFKVITIIIAVIFLSGCNNIKLEKYTGENLNVGVIGEIPEIREDNVIFNKITFKDLEEKNTLSKYDAIFITKDNLIE ASEGKYSSIYKEGIVPFFFIESTKGDIPFIYEELSYEEVPQQGNPPFYAVGIYIKDSKLSSIEYGLYNDIKNKKNIEDVY SRIFKTISENKIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20037; Mature: 20037
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYFKVITIIIAVIFLSGCNNIKLEKYTGENLNVGVIGEIPEIREDNVIFNKITFKDLE CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEHHHHH EKNTLSKYDAIFITKDNLIEASEGKYSSIYKEGIVPFFFIESTKGDIPFIYEELSYEEVP HCCCCCHHCEEEEECCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCHHHCC QQGNPPFYAVGIYIKDSKLSSIEYGLYNDIKNKKNIEDVYSRIFKTISENKIY CCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRKYFKVITIIIAVIFLSGCNNIKLEKYTGENLNVGVIGEIPEIREDNVIFNKITFKDLE CCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCCCCCCCEEEEEEEHHHHH EKNTLSKYDAIFITKDNLIEASEGKYSSIYKEGIVPFFFIESTKGDIPFIYEELSYEEVP HCCCCCHHCEEEEECCCEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHCCHHHCC QQGNPPFYAVGIYIKDSKLSSIEYGLYNDIKNKKNIEDVYSRIFKTISENKIY CCCCCCEEEEEEEEECCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA