| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is blaR1 [H]
Identifier: 187934087
GI number: 187934087
Start: 2244196
End: 2245923
Strand: Reverse
Name: blaR1 [H]
Synonym: CLL_A2154
Alternate gene names: 187934087
Gene position: 2245923-2244196 (Counterclockwise)
Preceding gene: 187935527
Following gene: 187933317
Centisome position: 59.1
GC content: 24.25
Gene sequence:
>1728_bases ATGAATTTTTTCGAGACTACTATAGTTTCTTCTTTCATTGGAAGCATAATAGTATTAATTATATTAAGCATAAATAGCAT ATTTAGATATAAGTTAAATCCTACATTTCATTATTATATATGGATAATATTGATTGTAAAATTAATATTTCCTTTTGGGC CAGAAAACTCTCTGAATTTTTCTCATATATACCAAAGAGTATATATAGAGAATAATGCAAATGAAAACTCACTAAAAGTA CAAGAAAATTCTATAAAACAATCTCAAAATTCAGATTTAGAAGATTTAAAATCAAAAAATTCTTTTCAAAATTCAAATAA TAATAAACTCACCTTAAAAACCAATATACCGTTGAAAAATCAACTTCACATTAAGAAAATATTCGTTTCCTTATGGATAT TAGGTGTAATAGTGCTAATATGCATATTTATTTTAGCACATAAAAAACTTAAACAAATAGTTGAAACTTCTATTAAAAAA GTAACTAATGAGCATAAAGAAATTTTAAATAATTGTATAAACATTATTCATATAAAAACTAAAGTAAAATTATTATATTC TTCAAAAATAAGCAGTCCCTGTTTATGTGGATTAGTTAAACCAAAGATATTAATTCCAATAAGCTTAGTAGAGAACATTA GCGCATCTGACTTTAAATACATTTTAATGCATGAATTAATTCATTTAAAAAGGAGAGATATACTAATAAACTGGATCATA ATTTTATTGTCCATTATTTACTGGTTTAATCCAATAGTTATTTATGGTCTTAGTAGAATTAAAAAAGACTGTGAATTTTC ATGTGATAATAATGCAATTTCTTATTTGAATGAAAATGAAAATATACAATATGGTAATGTGTTAATAAAAGTAGTGGCTT TATGTAGAAGCAATAATAGACTTATAGGAACTACTTCAATGGTTAGAGATAATTTAGAGATTAAAAGGAGGATTATCATG ATTTCAAAATATAAGAAAATAAATTTTAAAGGAGTATTACTTAGTAGTATTATTGTCGTTATTATAGGGGGAGTAGCAGT TGGGGTAAATGCTTCAAAATTAAATATTGATAATACAGTAAAAGCACAAGTTTCAACTTTTGATAATATAGCTAGTAATA ATACAGAAGATCAAACATTATCAACCAATGAAAATAATATATCAAATGATAACTCAAATTCTGTAGTTTCATTTTCATCT GATATTATAATTTATAATAGTCATGTTGATGAAGATTATCGATCTGGGATAAATGTAACTGATATAGGTGCTTTAATTAA TGATAAACTTATAAAAGAAGGTTTAAGTAGTAATTTTATTGAGTGCAAGGCTCCTAAAGAATATACTGAATCATATCAAA ATTCACGTGATTTAATAAAAGCAGATGTTAAAGATTATTCAAATAATATTTTATTGGATATACATCGAGATGCAGTAAAT AGTACTAAATGTGATACAAAAAATATAACATTAGTTCTTGCTAAAAATAGTCCTTATTATGAGAACAATAAGGTATTTGC TGAAAGTTTATTACAAAATATAAATAGTTCAAATGAAATTAAAGCAAAAATAATTTCGTATAATCGTGGTAAGTTATGCT TTAATCAGGATTTATCTAAAAATGCGTTGCTTATTAACTTGGGAAATAACATGTCTAGTGATAGTGATATAGAAAAGTGC GTAAATGCACTTGTTTCATCTTTAAAGGAAACCAAAAAGGATAGTTAG
Upstream 100 bases:
>100_bases TGCTTTTAAACTTTGTTGAATCAAAAGAAATATCTGAAACAGACATAGAAGAATTAAAGAACATACTCAAACAATCAAAT AAAAAGAAAGGTTGAAGTGT
Downstream 100 bases:
>100_bases GAATATTAGTTAAATGTTTTTAAATTAGGCTGTGTTTTAAATAAATGTTGATAAATGAATTATAATTATATTTTTCTTTT CTATGTAAATACCCCTTTTT
Product: peptidase, M56 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MNFFETTIVSSFIGSIIVLIILSINSIFRYKLNPTFHYYIWIILIVKLIFPFGPENSLNFSHIYQRVYIENNANENSLKV QENSIKQSQNSDLEDLKSKNSFQNSNNNKLTLKTNIPLKNQLHIKKIFVSLWILGVIVLICIFILAHKKLKQIVETSIKK VTNEHKEILNNCINIIHIKTKVKLLYSSKISSPCLCGLVKPKILIPISLVENISASDFKYILMHELIHLKRRDILINWII ILLSIIYWFNPIVIYGLSRIKKDCEFSCDNNAISYLNENENIQYGNVLIKVVALCRSNNRLIGTTSMVRDNLEIKRRIIM ISKYKKINFKGVLLSSIIVVIIGGVAVGVNASKLNIDNTVKAQVSTFDNIASNNTEDQTLSTNENNISNDNSNSVVSFSS DIIIYNSHVDEDYRSGINVTDIGALINDKLIKEGLSSNFIECKAPKEYTESYQNSRDLIKADVKDYSNNILLDIHRDAVN STKCDTKNITLVLAKNSPYYENNKVFAESLLQNINSSNEIKAKIISYNRGKLCFNQDLSKNALLINLGNNMSSDSDIEKC VNALVSSLKETKKDS
Sequences:
>Translated_575_residues MNFFETTIVSSFIGSIIVLIILSINSIFRYKLNPTFHYYIWIILIVKLIFPFGPENSLNFSHIYQRVYIENNANENSLKV QENSIKQSQNSDLEDLKSKNSFQNSNNNKLTLKTNIPLKNQLHIKKIFVSLWILGVIVLICIFILAHKKLKQIVETSIKK VTNEHKEILNNCINIIHIKTKVKLLYSSKISSPCLCGLVKPKILIPISLVENISASDFKYILMHELIHLKRRDILINWII ILLSIIYWFNPIVIYGLSRIKKDCEFSCDNNAISYLNENENIQYGNVLIKVVALCRSNNRLIGTTSMVRDNLEIKRRIIM ISKYKKINFKGVLLSSIIVVIIGGVAVGVNASKLNIDNTVKAQVSTFDNIASNNTEDQTLSTNENNISNDNSNSVVSFSS DIIIYNSHVDEDYRSGINVTDIGALINDKLIKEGLSSNFIECKAPKEYTESYQNSRDLIKADVKDYSNNILLDIHRDAVN STKCDTKNITLVLAKNSPYYENNKVFAESLLQNINSSNEIKAKIISYNRGKLCFNQDLSKNALLINLGNNMSSDSDIEKC VNALVSSLKETKKDS >Mature_575_residues MNFFETTIVSSFIGSIIVLIILSINSIFRYKLNPTFHYYIWIILIVKLIFPFGPENSLNFSHIYQRVYIENNANENSLKV QENSIKQSQNSDLEDLKSKNSFQNSNNNKLTLKTNIPLKNQLHIKKIFVSLWILGVIVLICIFILAHKKLKQIVETSIKK VTNEHKEILNNCINIIHIKTKVKLLYSSKISSPCLCGLVKPKILIPISLVENISASDFKYILMHELIHLKRRDILINWII ILLSIIYWFNPIVIYGLSRIKKDCEFSCDNNAISYLNENENIQYGNVLIKVVALCRSNNRLIGTTSMVRDNLEIKRRIIM ISKYKKINFKGVLLSSIIVVIIGGVAVGVNASKLNIDNTVKAQVSTFDNIASNNTEDQTLSTNENNISNDNSNSVVSFSS DIIIYNSHVDEDYRSGINVTDIGALINDKLIKEGLSSNFIECKAPKEYTESYQNSRDLIKADVKDYSNNILLDIHRDAVN STKCDTKNITLVLAKNSPYYENNKVFAESLLQNINSSNEIKAKIISYNRGKLCFNQDLSKNALLINLGNNMSSDSDIEKC VNALVSSLKETKKDS
Specific function: BlaR1 is a potential penicillin-binding protein required for induction of beta-lactamase in Bacillus licheniformis [H]
COG id: COG4219
COG function: function code KT; Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M56 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001460 - InterPro: IPR008756 [H]
Pfam domain/function: PF05569 Peptidase_M56; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 65226; Mature: 65226
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFETTIVSSFIGSIIVLIILSINSIFRYKLNPTFHYYIWIILIVKLIFPFGPENSLNF CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCH SHIYQRVYIENNANENSLKVQENSIKQSQNSDLEDLKSKNSFQNSNNNKLTLKTNIPLKN HHHHHEEEEECCCCCCCEEEEHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCC QLHIKKIFVSLWILGVIVLICIFILAHKKLKQIVETSIKKVTNEHKEILNNCINIIHIKT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEH KVKLLYSSKISSPCLCGLVKPKILIPISLVENISASDFKYILMHELIHLKRRDILINWII HEEEEECCCCCCCCCHHCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ILLSIIYWFNPIVIYGLSRIKKDCEFSCDNNAISYLNENENIQYGNVLIKVVALCRSNNR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCE LIGTTSMVRDNLEIKRRIIMISKYKKINFKGVLLSSIIVVIIGGVAVGVNASKLNIDNTV EEEEHHHHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCCCCCEECCCCCH KAQVSTFDNIASNNTEDQTLSTNENNISNDNSNSVVSFSSDIIIYNSHVDEDYRSGINVT HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCCHHHHCCCCHH DIGALINDKLIKEGLSSNFIECKAPKEYTESYQNSRDLIKADVKDYSNNILLDIHRDAVN HHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCC STKCDTKNITLVLAKNSPYYENNKVFAESLLQNINSSNEIKAKIISYNRGKLCFNQDLSK CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCC NALLINLGNNMSSDSDIEKCVNALVSSLKETKKDS CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNFFETTIVSSFIGSIIVLIILSINSIFRYKLNPTFHYYIWIILIVKLIFPFGPENSLNF CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCH SHIYQRVYIENNANENSLKVQENSIKQSQNSDLEDLKSKNSFQNSNNNKLTLKTNIPLKN HHHHHEEEEECCCCCCCEEEEHHHHHCCCCCCHHHHHHCCCCCCCCCCEEEEEECCCCCC QLHIKKIFVSLWILGVIVLICIFILAHKKLKQIVETSIKKVTNEHKEILNNCINIIHIKT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEH KVKLLYSSKISSPCLCGLVKPKILIPISLVENISASDFKYILMHELIHLKRRDILINWII HEEEEECCCCCCCCCHHCCCCCEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH ILLSIIYWFNPIVIYGLSRIKKDCEFSCDNNAISYLNENENIQYGNVLIKVVALCRSNNR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHCCCCE LIGTTSMVRDNLEIKRRIIMISKYKKINFKGVLLSSIIVVIIGGVAVGVNASKLNIDNTV EEEEHHHHHCCHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCHHCCCCCCEECCCCCH KAQVSTFDNIASNNTEDQTLSTNENNISNDNSNSVVSFSSDIIIYNSHVDEDYRSGINVT HHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCEEEECCCEEEEECCCCHHHHCCCCHH DIGALINDKLIKEGLSSNFIECKAPKEYTESYQNSRDLIKADVKDYSNNILLDIHRDAVN HHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCCCC STKCDTKNITLVLAKNSPYYENNKVFAESLLQNINSSNEIKAKIISYNRGKLCFNQDLSK CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEECCCCCC NALLINLGNNMSSDSDIEKCVNALVSSLKETKKDS CEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3040663; 3260234; 2404938 [H]