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The map label for this gene is uvsE [H]

Identifier: 187933809

GI number: 187933809

Start: 2610137

End: 2611099

Strand: Reverse

Name: uvsE [H]

Synonym: CLL_A2513

Alternate gene names: 187933809

Gene position: 2611099-2610137 (Counterclockwise)

Preceding gene: 187934524

Following gene: 187933470

Centisome position: 68.71

GC content: 26.06

Gene sequence:

>963_bases
ATGAAAATAAGATTAGGATATGTTTCAATTGCAATGAATTTAGGAAAAAAGGTTACTAGTTCTAGTAGAGTAACTTTTAA
AAATTATAGCAAAATAACGGAAAAAGAAAAGAAGAATGAAAAATTAAAATCAGTTACGTTATCTAACTTAAATGACTTAA
TAAAAATACTTGAATATAATATAGAAAATAATATACATTTCTATAGAATAACATCAGCTTTAATTCCTCTAGTTACTCAT
CCAAAAGTCGGATATTGGGGACATCGGGAACTGTTTAAAAAAGACTTTAAATATATAGGTAAGCTTATAAAAGAATCTAA
TATGAGAGTAGATACTCATCCAGATGAATTTAACGTTATAAATAGTATAAATCCTCAAGTTGTTGAAAATACAAAATTAA
ATTTAATACGTCAAGCAGAATGGTTTGAGGATTTTGATTATAAAGATGGAAAAATGGTAATACATCTTGGTGGAGCTACA
GGTGGAAAAGAAGAAGGGATTAAAAGATTTATTACTAATTTTAAAAAATTCCCTATAGAAATAACTTCAAGATTAATTAT
AGAAAATGATGATAAGACCTATACTGCAAGAGAAATTTTAAATGTATGTGAAGAATTAAGAGTACCTATGGTGTTAGATG
TTCATCATCATAATTGTAATAATTCTGGAGAAAACATAATGGAGTTAATTGAAGGTATTTTTAATACTTGGAGTGAAGAA
TCATTACCACCCAAAATTCATTTTTCTAGCCCTAGGGAAAATGAAAAAGATAGAAAGCATTCAGATTTTATAAATTCAAG
TGATTTTGTTGATTTTATCGAAAAAATGAAAGTAATAGATAAAGACTTTGATGTCATGCTTGAATGTAAACAGAAGGACT
TAGCGCTATTTAAATTAGTAAAAGAAATAAAGGAAATTAAGCCTAATTATAAATGGATTGATAAAAGTACTTTTGAAGTT
TAA

Upstream 100 bases:

>100_bases
TATAATAATATTTATTATAGTATGTTTAATAGGAATATGGATAGCTAATTGGTATAAAAACAAAAGATAGTTAATTCTTT
TGATAATATAGGAGAATGTT

Downstream 100 bases:

>100_bases
ATGTAAGCCAGAATTTAATTTTCTGGCTTTAAAAAATATATATAAGAATAATAATTAATCTATGTAAAAATTTATAAATA
TATTTATAAGAATATTTTAA

Product: UV damage endonuclease

Products: NA

Alternate protein names: UV-endonuclease; UVED [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKIRLGYVSIAMNLGKKVTSSSRVTFKNYSKITEKEKKNEKLKSVTLSNLNDLIKILEYNIENNIHFYRITSALIPLVTH
PKVGYWGHRELFKKDFKYIGKLIKESNMRVDTHPDEFNVINSINPQVVENTKLNLIRQAEWFEDFDYKDGKMVIHLGGAT
GGKEEGIKRFITNFKKFPIEITSRLIIENDDKTYTAREILNVCEELRVPMVLDVHHHNCNNSGENIMELIEGIFNTWSEE
SLPPKIHFSSPRENEKDRKHSDFINSSDFVDFIEKMKVIDKDFDVMLECKQKDLALFKLVKEIKEIKPNYKWIDKSTFEV

Sequences:

>Translated_320_residues
MKIRLGYVSIAMNLGKKVTSSSRVTFKNYSKITEKEKKNEKLKSVTLSNLNDLIKILEYNIENNIHFYRITSALIPLVTH
PKVGYWGHRELFKKDFKYIGKLIKESNMRVDTHPDEFNVINSINPQVVENTKLNLIRQAEWFEDFDYKDGKMVIHLGGAT
GGKEEGIKRFITNFKKFPIEITSRLIIENDDKTYTAREILNVCEELRVPMVLDVHHHNCNNSGENIMELIEGIFNTWSEE
SLPPKIHFSSPRENEKDRKHSDFINSSDFVDFIEKMKVIDKDFDVMLECKQKDLALFKLVKEIKEIKPNYKWIDKSTFEV
>Mature_320_residues
MKIRLGYVSIAMNLGKKVTSSSRVTFKNYSKITEKEKKNEKLKSVTLSNLNDLIKILEYNIENNIHFYRITSALIPLVTH
PKVGYWGHRELFKKDFKYIGKLIKESNMRVDTHPDEFNVINSINPQVVENTKLNLIRQAEWFEDFDYKDGKMVIHLGGAT
GGKEEGIKRFITNFKKFPIEITSRLIIENDDKTYTAREILNVCEELRVPMVLDVHHHNCNNSGENIMELIEGIFNTWSEE
SLPPKIHFSSPRENEKDRKHSDFINSSDFVDFIEKMKVIDKDFDVMLECKQKDLALFKLVKEIKEIKPNYKWIDKSTFEV

Specific function: Component in a DNA repair pathway. Removal of UV-light damaged nucleotides. Recognizes pyrimidine dimers and cleave a phosphodiester bond immediately 5' to the lesion [H]

COG id: COG4294

COG function: function code L; UV damage repair endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uve1/uvsE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004601
- InterPro:   IPR013022 [H]

Pfam domain/function: PF03851 UvdE [H]

EC number: NA

Molecular weight: Translated: 37499; Mature: 37499

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRLGYVSIAMNLGKKVTSSSRVTFKNYSKITEKEKKNEKLKSVTLSNLNDLIKILEYN
CEEEEEHHHHHHHHCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENNIHFYRITSALIPLVTHPKVGYWGHRELFKKDFKYIGKLIKESNMRVDTHPDEFNVI
CCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHH
NSINPQVVENTKLNLIRQAEWFEDFDYKDGKMVIHLGGATGGKEEGIKRFITNFKKFPIE
CCCCCHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
ITSRLIIENDDKTYTAREILNVCEELRVPMVLDVHHHNCNNSGENIMELIEGIFNTWSEE
EEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
SLPPKIHFSSPRENEKDRKHSDFINSSDFVDFIEKMKVIDKDFDVMLECKQKDLALFKLV
CCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHH
KEIKEIKPNYKWIDKSTFEV
HHHHHHCCCCEECCCCCCCC
>Mature Secondary Structure
MKIRLGYVSIAMNLGKKVTSSSRVTFKNYSKITEKEKKNEKLKSVTLSNLNDLIKILEYN
CEEEEEHHHHHHHHCHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IENNIHFYRITSALIPLVTHPKVGYWGHRELFKKDFKYIGKLIKESNMRVDTHPDEFNVI
CCCCEEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCHH
NSINPQVVENTKLNLIRQAEWFEDFDYKDGKMVIHLGGATGGKEEGIKRFITNFKKFPIE
CCCCCHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCE
ITSRLIIENDDKTYTAREILNVCEELRVPMVLDVHHHNCNNSGENIMELIEGIFNTWSEE
EEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC
SLPPKIHFSSPRENEKDRKHSDFINSSDFVDFIEKMKVIDKDFDVMLECKQKDLALFKLV
CCCCEEECCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHCHHHHHHHHHH
KEIKEIKPNYKWIDKSTFEV
HHHHHHCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA