| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933795
Identifier: 187933795
GI number: 187933795
Start: 3501248
End: 3502174
Strand: Reverse
Name: 187933795
Synonym: CLL_A3329
Alternate gene names: NA
Gene position: 3502174-3501248 (Counterclockwise)
Preceding gene: 187934647
Following gene: 187933411
Centisome position: 92.15
GC content: 29.67
Gene sequence:
>927_bases ATGAATAATACAGGTGGAATCATTGTAGCGGCAGGACAGATAAATGATAATGGAGGGGTATCTCCACTTTTTCAAATAGG TTCAATATCGATTATAAAACGCATTATTTTGACATTTCAACAAGCTAAAATATCTCCTATTGTTGTAATTACAGGATATC AATCACTAGAGGTTGAGCAGCATTTAGCAGATTATGAAGTTATATTTTTAAAGAATGAGAACTATGATTCTACTGAGAAA TTTGATTCTGCTAAAATAGGGTTAAATTTTTTAAAAGATAAATGTAAACAAGTTATTTTTACGTCAGCAACAATTCCTAT GTATACTTCAAATACTTTGAGTAAACTTATAAAAACAGACAAACAGTTAATAGTTCCATCATATAAAGGAAGAGCAGGAC ATCCATTACTTATAAATTGTAATTTAATTACTAAGATTGTTGAATATAATGGTAAAGAAGGAATGCGCGGAGCTATTAAC AGTATAGGAATTATAAAAGAGTATTTAGAAGTAGAAGATGAGGGTATTATTTTGGAAGCAGATGAAATAGAAAAATTGGA TGGAGTTTTACAATATTACAATGATAAATTATTACATCCTTTTATACGTATTAGCATTGAAAAAGAGTCATTGTTTTTCA ATTCTAGAGCAAAGCTGTTGTTACTTTTAATTCAAGAAACACATTCTGTAAAAAGAGCATGTAAACATATGGCGCTTTCT TATGGAAAGGCATGGAGTATGTTAAATGAAATGGAAAAATCACTAGGATATAATGTTGTTGAGAGACGCCATGGTGGAAA GCGAGGCGGAAAGACAAATTTAACTCCAGAAGGAGAAGATTTTTTAACAAAATATCAAAGGTATGAAGATGATATTAGAC AATATGCATCTAAGCATTTCTATGATATTTTTGAAGAAGTTAAATAG
Upstream 100 bases:
>100_bases TTTTATGTTAAAATGGTAAAACAAGGTGAATTTAAGTTGATTAATTAAATGATAATTTATTCACTGAAAAAGATAAAATA TAAAGAAGAGATGATGGAAG
Downstream 100 bases:
>100_bases TATTTAGAAAGATAGCACCAAGTTCTTTTGAAGAAGAATTTGATGCTATTTTTTTGTTGCAATATAATATAACATATATT AACAAAAGTGCTGGGGCATT
Product: LysR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein LysR; Transcriptional Regulator LysR Family; Transcriptional Regulator LysR Family Protein; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; Transcriptional Regulator ModE Family; Regulatory Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein; Molybdopterin-Guanine Dinucleotide Synthase; Molybdenum Transport Domain-Containing Protein; Domain HDIG Containing Protein; Molybdenum Transport Domain Protein
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNNTGGIIVAAGQINDNGGVSPLFQIGSISIIKRIILTFQQAKISPIVVITGYQSLEVEQHLADYEVIFLKNENYDSTEK FDSAKIGLNFLKDKCKQVIFTSATIPMYTSNTLSKLIKTDKQLIVPSYKGRAGHPLLINCNLITKIVEYNGKEGMRGAIN SIGIIKEYLEVEDEGIILEADEIEKLDGVLQYYNDKLLHPFIRISIEKESLFFNSRAKLLLLLIQETHSVKRACKHMALS YGKAWSMLNEMEKSLGYNVVERRHGGKRGGKTNLTPEGEDFLTKYQRYEDDIRQYASKHFYDIFEEVK
Sequences:
>Translated_308_residues MNNTGGIIVAAGQINDNGGVSPLFQIGSISIIKRIILTFQQAKISPIVVITGYQSLEVEQHLADYEVIFLKNENYDSTEK FDSAKIGLNFLKDKCKQVIFTSATIPMYTSNTLSKLIKTDKQLIVPSYKGRAGHPLLINCNLITKIVEYNGKEGMRGAIN SIGIIKEYLEVEDEGIILEADEIEKLDGVLQYYNDKLLHPFIRISIEKESLFFNSRAKLLLLLIQETHSVKRACKHMALS YGKAWSMLNEMEKSLGYNVVERRHGGKRGGKTNLTPEGEDFLTKYQRYEDDIRQYASKHFYDIFEEVK >Mature_308_residues MNNTGGIIVAAGQINDNGGVSPLFQIGSISIIKRIILTFQQAKISPIVVITGYQSLEVEQHLADYEVIFLKNENYDSTEK FDSAKIGLNFLKDKCKQVIFTSATIPMYTSNTLSKLIKTDKQLIVPSYKGRAGHPLLINCNLITKIVEYNGKEGMRGAIN SIGIIKEYLEVEDEGIILEADEIEKLDGVLQYYNDKLLHPFIRISIEKESLFFNSRAKLLLLLIQETHSVKRACKHMALS YGKAWSMLNEMEKSLGYNVVERRHGGKRGGKTNLTPEGEDFLTKYQRYEDDIRQYASKHFYDIFEEVK
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34972; Mature: 34972
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNTGGIIVAAGQINDNGGVSPLFQIGSISIIKRIILTFQQAKISPIVVITGYQSLEVEQ CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH HLADYEVIFLKNENYDSTEKFDSAKIGLNFLKDKCKQVIFTSATIPMYTSNTLSKLIKTD HHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCC KQLIVPSYKGRAGHPLLINCNLITKIVEYNGKEGMRGAINSIGIIKEYLEVEDEGIILEA CCEECCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEH DEIEKLDGVLQYYNDKLLHPFIRISIEKESLFFNSRAKLLLLLIQETHSVKRACKHMALS HHHHHHHHHHHHHCCHHCCCEEEEEEEHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH YGKAWSMLNEMEKSLGYNVVERRHGGKRGGKTNLTPEGEDFLTKYQRYEDDIRQYASKHF HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YDIFEEVK HHHHHHCC >Mature Secondary Structure MNNTGGIIVAAGQINDNGGVSPLFQIGSISIIKRIILTFQQAKISPIVVITGYQSLEVEQ CCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH HLADYEVIFLKNENYDSTEKFDSAKIGLNFLKDKCKQVIFTSATIPMYTSNTLSKLIKTD HHCCEEEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHHHHHCC KQLIVPSYKGRAGHPLLINCNLITKIVEYNGKEGMRGAINSIGIIKEYLEVEDEGIILEA CCEECCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEH DEIEKLDGVLQYYNDKLLHPFIRISIEKESLFFNSRAKLLLLLIQETHSVKRACKHMALS HHHHHHHHHHHHHCCHHCCCEEEEEEEHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHH YGKAWSMLNEMEKSLGYNVVERRHGGKRGGKTNLTPEGEDFLTKYQRYEDDIRQYASKHF HHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH YDIFEEVK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA