| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is ywqG [H]
Identifier: 187933502
GI number: 187933502
Start: 2800254
End: 2800985
Strand: Reverse
Name: ywqG [H]
Synonym: CLL_A2686
Alternate gene names: 187933502
Gene position: 2800985-2800254 (Counterclockwise)
Preceding gene: 187935159
Following gene: 187935011
Centisome position: 73.7
GC content: 27.19
Gene sequence:
>732_bases ATGAAGTATGAAGTACCAGAATTATTTAAGGAATATGAAGAAATTATAAAAACAACTATTCGTAAAAGTAACGAAATTAC TTTTAAAGCAGAGAAAACAAAGCCATGGGAAAGTAAATTAGGGGGATGTCCTTATCTTGAAAATATTAATGATTATCCCT TAGATGAAGAAAACAATCCAATGATGTTTATTGCTCAAATTAATTTATCTGATTTAGTAGAATTAAAAAATATGCCACAG AGTGGATTGCTTCAATTTTTTGTTCATAATGATGACTGTTATGGTTATGAATATCCATGTAAAGTTATATATATTGAAGA ATATACAACAGATGAGAGTAAATTAATTAGTGAAAATCCATATGAGAAGGATTATGAGGACTTTTTACCATTTTATAAAG AAGGAAAAATGAACTTTCAAATAAATGAAATGCCAATGACTTGTCCTTGTGAAGATTTTAATAAATTATTTGATGGACTT AATGAAAAACAAGAAAATAAAAAGTGGGATGAGTTTGATGGTGCAGGTAGTAGAATTGGAGGGTATCCATATTTTGTTCA ATCAGAATCAGAGCATTATAAAGAACATAATATTTTGTTATTACAACTAGATATAGAAGATGAATGTGGAATTATGTTTG GTGATTCTGGAAATTGTAATTTTTTTATTAGTGAAGAGGATTTAAAAAATAGAGACTTTTCAAATGTAAAATATGATTGG CAATGCTGCTAA
Upstream 100 bases:
>100_bases ATAATAATGACTTATATTGTAATAAGAGTATCGATTTAGGATTTTTGGGTACTTACAATTCAAATAAAAGTGTTTAATAT ATTGAGAGGTGATTAAAATA
Downstream 100 bases:
>100_bases TAAAATTTAAGAGATTTTATGAAACTTGTAAATTAAAAATAAGATTGTATGGGATTTTTTGTTATTTTCATTATGCTGTA AGTAAAGTTTGGAATAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKYEVPELFKEYEEIIKTTIRKSNEITFKAEKTKPWESKLGGCPYLENINDYPLDEENNPMMFIAQINLSDLVELKNMPQ SGLLQFFVHNDDCYGYEYPCKVIYIEEYTTDESKLISENPYEKDYEDFLPFYKEGKMNFQINEMPMTCPCEDFNKLFDGL NEKQENKKWDEFDGAGSRIGGYPYFVQSESEHYKEHNILLLQLDIEDECGIMFGDSGNCNFFISEEDLKNRDFSNVKYDW QCC
Sequences:
>Translated_243_residues MKYEVPELFKEYEEIIKTTIRKSNEITFKAEKTKPWESKLGGCPYLENINDYPLDEENNPMMFIAQINLSDLVELKNMPQ SGLLQFFVHNDDCYGYEYPCKVIYIEEYTTDESKLISENPYEKDYEDFLPFYKEGKMNFQINEMPMTCPCEDFNKLFDGL NEKQENKKWDEFDGAGSRIGGYPYFVQSESEHYKEHNILLLQLDIEDECGIMFGDSGNCNFFISEEDLKNRDFSNVKYDW QCC >Mature_243_residues MKYEVPELFKEYEEIIKTTIRKSNEITFKAEKTKPWESKLGGCPYLENINDYPLDEENNPMMFIAQINLSDLVELKNMPQ SGLLQFFVHNDDCYGYEYPCKVIYIEEYTTDESKLISENPYEKDYEDFLPFYKEGKMNFQINEMPMTCPCEDFNKLFDGL NEKQENKKWDEFDGAGSRIGGYPYFVQSESEHYKEHNILLLQLDIEDECGIMFGDSGNCNFFISEEDLKNRDFSNVKYDW QCC
Specific function: Unknown
COG id: COG3878
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015315 [H]
Pfam domain/function: PF09234 DUF1963 [H]
EC number: NA
Molecular weight: Translated: 28803; Mature: 28803
Theoretical pI: Translated: 4.11; Mature: 4.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEVPELFKEYEEIIKTTIRKSNEITFKAEKTKPWESKLGGCPYLENINDYPLDEENNP CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCC MMFIAQINLSDLVELKNMPQSGLLQFFVHNDDCYGYEYPCKVIYIEEYTTDESKLISENP EEEEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEECCEEEEEEEECCCCHHHHCCCCC YEKDYEDFLPFYKEGKMNFQINEMPMTCPCEDFNKLFDGLNEKQENKKWDEFDGAGSRIG CCCCHHHHCHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCC GYPYFVQSESEHYKEHNILLLQLDIEDECGIMFGDSGNCNFFISEEDLKNRDFSNVKYDW CCCEEECCCHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEE QCC EEC >Mature Secondary Structure MKYEVPELFKEYEEIIKTTIRKSNEITFKAEKTKPWESKLGGCPYLENINDYPLDEENNP CCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCCC MMFIAQINLSDLVELKNMPQSGLLQFFVHNDDCYGYEYPCKVIYIEEYTTDESKLISENP EEEEEECCHHHHHHHHCCCCCCEEEEEEECCCCCCEECCEEEEEEEECCCCHHHHCCCCC YEKDYEDFLPFYKEGKMNFQINEMPMTCPCEDFNKLFDGLNEKQENKKWDEFDGAGSRIG CCCCHHHHCHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCC GYPYFVQSESEHYKEHNILLLQLDIEDECGIMFGDSGNCNFFISEEDLKNRDFSNVKYDW CCCEEECCCHHHHCCCCEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEE QCC EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]