| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187933201
Identifier: 187933201
GI number: 187933201
Start: 3435845
End: 3436312
Strand: Reverse
Name: 187933201
Synonym: CLL_A3273
Alternate gene names: NA
Gene position: 3436312-3435845 (Counterclockwise)
Preceding gene: 187932435
Following gene: 187934417
Centisome position: 90.42
GC content: 25.85
Gene sequence:
>468_bases ATGAGCACAAGAGAATTACTAGATAATTTATTCAAAGAGTTAGAAGATGTAATATATTATGAAGATGTAGGAATTCACAA AATAGTTGATGATTCTTATATAAAACCGTATTACAAACAATTAACAAACATTTCGTTTGAAGATTGGAGCAAATATCATG CTTCAAAAATGCTTAAAATAGTTGATGATATGTATTTATCTGAAATGATTAATACAAAGAAGCCACTATTTGTAGACAGG CTTTCTGTAGATACAAGTAAACCAAGTTGTTTAAGAGATTTTGGAATAGTATCAACTTGTCTTATACCATTTTTCTTAAA TGATGAAATAGCCTTCTTTATTACTATGCCAATATTTAAAGAAGAACATAAATATTCAGATGAAGAAAAATCAAAAGCAG TAAGCATAGTAAAAAAATATAATAAGATTTTATGTATTGAGGAGATGTTTAAACGTGAAATTATCTAA
Upstream 100 bases:
>100_bases TGAAATATTATGGTAAGATAATATTAGTGATACTATTAAGTATATTATTTTTATAAATAATATTTTTAGGTAAATATTAA ATTTCAGAAAGGAATATATT
Downstream 100 bases:
>100_bases AGCTATAGCAAAATATATTGAAAGTTGTGGTGTGGAATACGTATTTGGTATACCATCAGGAAATGTAGCAAGTATTTATG ATGCACTTAATGACACTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MSTRELLDNLFKELEDVIYYEDVGIHKIVDDSYIKPYYKQLTNISFEDWSKYHASKMLKIVDDMYLSEMINTKKPLFVDR LSVDTSKPSCLRDFGIVSTCLIPFFLNDEIAFFITMPIFKEEHKYSDEEKSKAVSIVKKYNKILCIEEMFKREII
Sequences:
>Translated_155_residues MSTRELLDNLFKELEDVIYYEDVGIHKIVDDSYIKPYYKQLTNISFEDWSKYHASKMLKIVDDMYLSEMINTKKPLFVDR LSVDTSKPSCLRDFGIVSTCLIPFFLNDEIAFFITMPIFKEEHKYSDEEKSKAVSIVKKYNKILCIEEMFKREII >Mature_154_residues STRELLDNLFKELEDVIYYEDVGIHKIVDDSYIKPYYKQLTNISFEDWSKYHASKMLKIVDDMYLSEMINTKKPLFVDRL SVDTSKPSCLRDFGIVSTCLIPFFLNDEIAFFITMPIFKEEHKYSDEEKSKAVSIVKKYNKILCIEEMFKREII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18426; Mature: 18294
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRELLDNLFKELEDVIYYEDVGIHKIVDDSYIKPYYKQLTNISFEDWSKYHASKMLKI CCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHH VDDMYLSEMINTKKPLFVDRLSVDTSKPSCLRDFGIVSTCLIPFFLNDEIAFFITMPIFK HHHHHHHHHHCCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH EEHKYSDEEKSKAVSIVKKYNKILCIEEMFKREII HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STRELLDNLFKELEDVIYYEDVGIHKIVDDSYIKPYYKQLTNISFEDWSKYHASKMLKI CHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCHHHHHHHCCCHHHHHHHHHHHHHHH VDDMYLSEMINTKKPLFVDRLSVDTSKPSCLRDFGIVSTCLIPFFLNDEIAFFITMPIFK HHHHHHHHHHCCCCCCEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHH EEHKYSDEEKSKAVSIVKKYNKILCIEEMFKREII HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA