| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932941
Identifier: 187932941
GI number: 187932941
Start: 2303164
End: 2304156
Strand: Reverse
Name: 187932941
Synonym: CLL_A2220
Alternate gene names: NA
Gene position: 2304156-2303164 (Counterclockwise)
Preceding gene: 187935246
Following gene: 187934175
Centisome position: 60.63
GC content: 22.86
Gene sequence:
>993_bases TTGAGTAAGAATTATAAAAAGACTATGGATAAAATTACTGTAGATGATGAAATGAGAAAAAGAATATTAAATAATATAGA TTCTATAAAGCAAGAAAATACAAAAGACAAATTCAAGAAGAAAAGTTATAGAAGCTTAGGAACTTTAGCAGCAGCAGCGT GCTTTAGTATTATTGTATTTTCAGTTAATGTAAAAATGAGTTTAAATGATAAAATGAAAATGTCATTAAACGACAATAAA GAAATATCATTTAATCAAACAAAAGATAACAGTAATGAAAGCTCAAATGTAAATGACACAGATGCAGATACATATGAAAA TAATGAGAAGAACTTAGAGTTAGGTGAAGAAACTTCATCAGAAAAAACTAAAGATAATTATAATAAAACTTCAGCAAGCA ATAATTCAATAAGTAACAATGTATCAAATAATAATGCAATTAATAAAAGTTCAAATAATACTAAAAAAGAAATTCATCAA GAGAAAAAAAATGAACAAAAAACAGAAACAAATATAAAAGAAGATTCTTTAAATAATTCAGAACCACCAACAATGCAAGT AGTATATGATAATAATTACACTGATAGTAAAAGTAAAGTAGTTGAGAATGCTGAAACCTTAAATAAAAATTTAGAAGAAT TACAATCTAATGTAGGTTTTTCTATTAAAACACCTCAAGAAGTTATAGAAAATAAAGATATAAAAAATATAAACCTTAAA GAAAATAATAAGATATTAATAAGTTATGAAAATAGTGATGTGAAATTAGATTTTGAAGTGAAGAAAGAGGTTTCTAAAGA AGATAAAATTAATGATTCTAAATATAAAACAGAAAAGAACATAAGTATAAATGACAAAATTGTTTCATTAAAAGGAAATG ATAATTTAATTAATACTGCAAACTGGAGTGATGATGATTTATCATACTCTATAAATTCAAATGATGGAATAAGTGAAGAT AAAGCAATGAAAATTATTGAAAGTGTAAAATAA
Upstream 100 bases:
>100_bases CAAATTTCAAATTTAATTAATAAAAAGGAATCTACAGTACGATCATTATTGCATAGAGCTAGAAATATACTAAAAGACAA ATTGAAGGAGGATTATGATT
Downstream 100 bases:
>100_bases ATTTTTACAAATATATAGCTAAATAATGTTGGTATTTTAGCATGAAGACCTTAAAAGTAGTTTAAAAATAAACTAAGATA TATTATTTTTGGGAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSKNYKKTMDKITVDDEMRKRILNNIDSIKQENTKDKFKKKSYRSLGTLAAAACFSIIVFSVNVKMSLNDKMKMSLNDNK EISFNQTKDNSNESSNVNDTDADTYENNEKNLELGEETSSEKTKDNYNKTSASNNSISNNVSNNNAINKSSNNTKKEIHQ EKKNEQKTETNIKEDSLNNSEPPTMQVVYDNNYTDSKSKVVENAETLNKNLEELQSNVGFSIKTPQEVIENKDIKNINLK ENNKILISYENSDVKLDFEVKKEVSKEDKINDSKYKTEKNISINDKIVSLKGNDNLINTANWSDDDLSYSINSNDGISED KAMKIIESVK
Sequences:
>Translated_330_residues MSKNYKKTMDKITVDDEMRKRILNNIDSIKQENTKDKFKKKSYRSLGTLAAAACFSIIVFSVNVKMSLNDKMKMSLNDNK EISFNQTKDNSNESSNVNDTDADTYENNEKNLELGEETSSEKTKDNYNKTSASNNSISNNVSNNNAINKSSNNTKKEIHQ EKKNEQKTETNIKEDSLNNSEPPTMQVVYDNNYTDSKSKVVENAETLNKNLEELQSNVGFSIKTPQEVIENKDIKNINLK ENNKILISYENSDVKLDFEVKKEVSKEDKINDSKYKTEKNISINDKIVSLKGNDNLINTANWSDDDLSYSINSNDGISED KAMKIIESVK >Mature_329_residues SKNYKKTMDKITVDDEMRKRILNNIDSIKQENTKDKFKKKSYRSLGTLAAAACFSIIVFSVNVKMSLNDKMKMSLNDNKE ISFNQTKDNSNESSNVNDTDADTYENNEKNLELGEETSSEKTKDNYNKTSASNNSISNNVSNNNAINKSSNNTKKEIHQE KKNEQKTETNIKEDSLNNSEPPTMQVVYDNNYTDSKSKVVENAETLNKNLEELQSNVGFSIKTPQEVIENKDIKNINLKE NNKILISYENSDVKLDFEVKKEVSKEDKINDSKYKTEKNISINDKIVSLKGNDNLINTANWSDDDLSYSINSNDGISEDK AMKIIESVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37548; Mature: 37416
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNYKKTMDKITVDDEMRKRILNNIDSIKQENTKDKFKKKSYRSLGTLAAAACFSIIVF CCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVNVKMSLNDKMKMSLNDNKEISFNQTKDNSNESSNVNDTDADTYENNEKNLELGEETSS EEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKTKDNYNKTSASNNSISNNVSNNNAINKSSNNTKKEIHQEKKNEQKTETNIKEDSLNNS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC EPPTMQVVYDNNYTDSKSKVVENAETLNKNLEELQSNVGFSIKTPQEVIENKDIKNINLK CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCCCC ENNKILISYENSDVKLDFEVKKEVSKEDKINDSKYKTEKNISINDKIVSLKGNDNLINTA CCCEEEEEECCCCEEEEEHHHHHCCHHHCCCCCHHCCCCCCEECCEEEEEECCCCEEECC NWSDDDLSYSINSNDGISEDKAMKIIESVK CCCCCCCEEEECCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SKNYKKTMDKITVDDEMRKRILNNIDSIKQENTKDKFKKKSYRSLGTLAAAACFSIIVF CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SVNVKMSLNDKMKMSLNDNKEISFNQTKDNSNESSNVNDTDADTYENNEKNLELGEETSS EEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKTKDNYNKTSASNNSISNNVSNNNAINKSSNNTKKEIHQEKKNEQKTETNIKEDSLNNS HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC EPPTMQVVYDNNYTDSKSKVVENAETLNKNLEELQSNVGFSIKTPQEVIENKDIKNINLK CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCCCC ENNKILISYENSDVKLDFEVKKEVSKEDKINDSKYKTEKNISINDKIVSLKGNDNLINTA CCCEEEEEECCCCEEEEEHHHHHCCHHHCCCCCHHCCCCCCEECCEEEEEECCCCEEECC NWSDDDLSYSINSNDGISEDKAMKIIESVK CCCCCCCEEEECCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA