Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
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Accession | NC_010674 |
Length | 3,800,327 |
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The map label for this gene is 187932931
Identifier: 187932931
GI number: 187932931
Start: 2313467
End: 2315242
Strand: Reverse
Name: 187932931
Synonym: CLL_A2229
Alternate gene names: NA
Gene position: 2315242-2313467 (Counterclockwise)
Preceding gene: 187933867
Following gene: 187934428
Centisome position: 60.92
GC content: 26.69
Gene sequence:
>1776_bases ATGGAATTTGGAGCTAAAATTGTTAATAGAAAGATAATAATACAAGATGAGATTGATAATGAGATGTGCTCTATTGAAAA TGGGCCTATAACTATAAAAGTATGTGACAAGATAAAAGTATATATCAACAAAAAACTTTGCAAAGTAAATAATACTTATG AAGTTACTTCAAAGGATGATATAGAGTGTAAAAGTATAAGTACAGAAGAAGTAAGGGCAGCTGCAGTTAATATATCTAGA GATAAAATGAAGGCTTTTGTGACAGTAAATTATGCACCTAAGATAGAATATGGACTTAAAGACAAAGAGTGTGTTTTAAA CTTAGTTTTAACTACTGAAGTAATAAATGAAAAGCATCCAGAACCTTTTAATATATCTGAATTAAAGAAGATATTAAGAG AAAGGGGTGTTGTATATGGTATAGATGAAGAGGCTTTAAAGATTGCATCAGAAAGTAAAGAAAAAGAAATTCTTGTTGCT AAAGGAGATGAGCCTATAACAGATATACCATCAGAAATAAAACCTTTATTTACACCAACTAAAATGTTTTTTCCAGATTT TGACTCAAAAGAAAAAATAGATTATAAGAATTTATTTAGAATTTCAAATGTTAAGGCTGGAGATAAAATAGCTGAAATAA TCCCAGAGGTTCTTGGAAAAGATGGGATGAATGTACTTGGACAAGTTGTTAAAAAAGATTATATAAGAAATGAACCAATA AAAACATCCAAAGGGTGTAAAATAGAAAATAATGATGTTATAGCATTAATAGATGGAAAAGCACACATATTAAATAGAAG TATTGGAGTTAATACAGTTTTTTCTGTGGAAAGTGTAAATATGGAAACATGCAATATTACTTTTTGTGGTGATATTGAAG TTTATAATAACGTTGATGATAATATGAGTGTTAATGCTGGTGGTTCTTTAGATGTAAGTCATAATGTAAATACATCTAAC GTAGTTACTGGAGGAGAAATTACTATTTTAGGAAGTGCAATTAGTTCTAAGATTTTATGTGGCCAAATTGATATGCAAAA ACAAGATTATTATGAGTTATTAAGTTTATACAAGGAAAATGTTTTATCAATAATTAATATTATGAAACAAGCAAATTCAG AAAATATGAAAATGGATTTTAGAACAACATTAAACTTAGTAATAGATACTAAATTTAAAGAATTTAAAAAGCTATCTTTA GATATAGTATCAACTAATATAAAAAATAAAATAAGATATAACAAATTAGTAGATCTAATTAGAGATAAGGTTCTTATGAA TGGTATGCTCGATTTAAATTCTATGAGACAATTAAATAATTTTAATAATATATTAGATGATGAATTAGAATACTATAATA AAAATATTATAGTTCCTTTAGATGTAAAATTGAATTATTGTCAGGATTGCTATATAAAATCCACAGGAAATATTATAATA AATGGCAATGGAGAATATACTTCTTATTTAAATGCTATGAAAGATATAATATTTGCTAAACCTAATTCAGTTGCTAGAGG TGGATTTTTAGACGCACAAGGCAATATAAGTGTAGGAGTTGTAGGGAGTAGTGCTTGTGTAGCTACAGCTTTAAAAGTTC CTAAGTCTGGACGAATAAGTGCTACAATTGCTTATCCAAATACAAAATTTTGCTTTGGAAATTCTACATTAATATTAGAA GAAAAACTTGAAAATATCACTATGTATTATGATGAACATTTTAGGAGTATTGAAATTTCTAAATCAGCATATAGTAGGAT TGGGAAATATAGTTAA
Upstream 100 bases:
>100_bases AATAAGATATGTTAAAAACAACGAGAAAGATACTATGAAATTTATAAATAGATATAAAACTAATGAAAAGGATTAAAATT AATTGGGGGATTAATAATAA
Downstream 100 bases:
>100_bases AATGAGAATTTATATTAATCTTATTTAGAGGAAAATATTGAAGAAAAGTAATATTTAGATGATAATAATTATATAAAGCA ATATGAAAATATTATTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MEFGAKIVNRKIIIQDEIDNEMCSIENGPITIKVCDKIKVYINKKLCKVNNTYEVTSKDDIECKSISTEEVRAAAVNISR DKMKAFVTVNYAPKIEYGLKDKECVLNLVLTTEVINEKHPEPFNISELKKILRERGVVYGIDEEALKIASESKEKEILVA KGDEPITDIPSEIKPLFTPTKMFFPDFDSKEKIDYKNLFRISNVKAGDKIAEIIPEVLGKDGMNVLGQVVKKDYIRNEPI KTSKGCKIENNDVIALIDGKAHILNRSIGVNTVFSVESVNMETCNITFCGDIEVYNNVDDNMSVNAGGSLDVSHNVNTSN VVTGGEITILGSAISSKILCGQIDMQKQDYYELLSLYKENVLSIINIMKQANSENMKMDFRTTLNLVIDTKFKEFKKLSL DIVSTNIKNKIRYNKLVDLIRDKVLMNGMLDLNSMRQLNNFNNILDDELEYYNKNIIVPLDVKLNYCQDCYIKSTGNIII NGNGEYTSYLNAMKDIIFAKPNSVARGGFLDAQGNISVGVVGSSACVATALKVPKSGRISATIAYPNTKFCFGNSTLILE EKLENITMYYDEHFRSIEISKSAYSRIGKYS
Sequences:
>Translated_591_residues MEFGAKIVNRKIIIQDEIDNEMCSIENGPITIKVCDKIKVYINKKLCKVNNTYEVTSKDDIECKSISTEEVRAAAVNISR DKMKAFVTVNYAPKIEYGLKDKECVLNLVLTTEVINEKHPEPFNISELKKILRERGVVYGIDEEALKIASESKEKEILVA KGDEPITDIPSEIKPLFTPTKMFFPDFDSKEKIDYKNLFRISNVKAGDKIAEIIPEVLGKDGMNVLGQVVKKDYIRNEPI KTSKGCKIENNDVIALIDGKAHILNRSIGVNTVFSVESVNMETCNITFCGDIEVYNNVDDNMSVNAGGSLDVSHNVNTSN VVTGGEITILGSAISSKILCGQIDMQKQDYYELLSLYKENVLSIINIMKQANSENMKMDFRTTLNLVIDTKFKEFKKLSL DIVSTNIKNKIRYNKLVDLIRDKVLMNGMLDLNSMRQLNNFNNILDDELEYYNKNIIVPLDVKLNYCQDCYIKSTGNIII NGNGEYTSYLNAMKDIIFAKPNSVARGGFLDAQGNISVGVVGSSACVATALKVPKSGRISATIAYPNTKFCFGNSTLILE EKLENITMYYDEHFRSIEISKSAYSRIGKYS >Mature_591_residues MEFGAKIVNRKIIIQDEIDNEMCSIENGPITIKVCDKIKVYINKKLCKVNNTYEVTSKDDIECKSISTEEVRAAAVNISR DKMKAFVTVNYAPKIEYGLKDKECVLNLVLTTEVINEKHPEPFNISELKKILRERGVVYGIDEEALKIASESKEKEILVA KGDEPITDIPSEIKPLFTPTKMFFPDFDSKEKIDYKNLFRISNVKAGDKIAEIIPEVLGKDGMNVLGQVVKKDYIRNEPI KTSKGCKIENNDVIALIDGKAHILNRSIGVNTVFSVESVNMETCNITFCGDIEVYNNVDDNMSVNAGGSLDVSHNVNTSN VVTGGEITILGSAISSKILCGQIDMQKQDYYELLSLYKENVLSIINIMKQANSENMKMDFRTTLNLVIDTKFKEFKKLSL DIVSTNIKNKIRYNKLVDLIRDKVLMNGMLDLNSMRQLNNFNNILDDELEYYNKNIIVPLDVKLNYCQDCYIKSTGNIII NGNGEYTSYLNAMKDIIFAKPNSVARGGFLDAQGNISVGVVGSSACVATALKVPKSGRISATIAYPNTKFCFGNSTLILE EKLENITMYYDEHFRSIEISKSAYSRIGKYS
Specific function: Unknown
COG id: COG1315
COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66285; Mature: 66285
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFGAKIVNRKIIIQDEIDNEMCSIENGPITIKVCDKIKVYINKKLCKVNNTYEVTSKDD CCCCCCHHCCEEEEEECCCCCCCCCCCCCEEEEEECEEEEEEEHEEEECCCEEEECCCCC IECKSISTEEVRAAAVNISRDKMKAFVTVNYAPKIEYGLKDKECVLNLVLTTEVINEKHP CEEECCCHHHHHHEEEECCHHHEEEEEEEEECCCCCCCCCCHHHHEEHHHHHHHHHCCCC EPFNISELKKILRERGVVYGIDEEALKIASESKEKEILVAKGDEPITDIPSEIKPLFTPT CCCCHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCC KMFFPDFDSKEKIDYKNLFRISNVKAGDKIAEIIPEVLGKDGMNVLGQVVKKDYIRNEPI HHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KTSKGCKIENNDVIALIDGKAHILNRSIGVNTVFSVESVNMETCNITFCGDIEVYNNVDD CCCCCCEECCCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEEEEEECEEEECCCCC NMSVNAGGSLDVSHNVNTSNVVTGGEITILGSAISSKILCGQIDMQKQDYYELLSLYKEN CEEECCCCCEEECCCCCCCCEEECCEEEEEEHHHCCCEEEEECCCCHHHHHHHHHHHHHH VLSIINIMKQANSENMKMDFRTTLNLVIDTKFKEFKKLSLDIVSTNIKNKIRYNKLVDLI HHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHEEEEEECCHHHHHHHHHHHHHH RDKVLMNGMLDLNSMRQLNNFNNILDDELEYYNKNIIVPLDVKLNYCQDCYIKSTGNIII HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEEECCCCEEE NGNGEYTSYLNAMKDIIFAKPNSVARGGFLDAQGNISVGVVGSSACVATALKVPKSGRIS ECCCCHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEEECCHHHHHHHHCCCCCCCEE ATIAYPNTKFCFGNSTLILEEKLENITMYYDEHFRSIEISKSAYSRIGKYS EEEECCCCEEEECCCEEEEEEHHCCEEEEECCCCCEEEECHHHHHHCCCCC >Mature Secondary Structure MEFGAKIVNRKIIIQDEIDNEMCSIENGPITIKVCDKIKVYINKKLCKVNNTYEVTSKDD CCCCCCHHCCEEEEEECCCCCCCCCCCCCEEEEEECEEEEEEEHEEEECCCEEEECCCCC IECKSISTEEVRAAAVNISRDKMKAFVTVNYAPKIEYGLKDKECVLNLVLTTEVINEKHP CEEECCCHHHHHHEEEECCHHHEEEEEEEEECCCCCCCCCCHHHHEEHHHHHHHHHCCCC EPFNISELKKILRERGVVYGIDEEALKIASESKEKEILVAKGDEPITDIPSEIKPLFTPT CCCCHHHHHHHHHHCCCEEECCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCC KMFFPDFDSKEKIDYKNLFRISNVKAGDKIAEIIPEVLGKDGMNVLGQVVKKDYIRNEPI HHCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC KTSKGCKIENNDVIALIDGKAHILNRSIGVNTVFSVESVNMETCNITFCGDIEVYNNVDD CCCCCCEECCCCEEEEECCCCEEEECCCCCCEEEEEEECCEEEEEEEEEECEEEECCCCC NMSVNAGGSLDVSHNVNTSNVVTGGEITILGSAISSKILCGQIDMQKQDYYELLSLYKEN CEEECCCCCEEECCCCCCCCEEECCEEEEEEHHHCCCEEEEECCCCHHHHHHHHHHHHHH VLSIINIMKQANSENMKMDFRTTLNLVIDTKFKEFKKLSLDIVSTNIKNKIRYNKLVDLI HHHHHHHHHHCCCCCCEEEEEEEEEEEEECCHHHHHHHEEEEEECCHHHHHHHHHHHHHH RDKVLMNGMLDLNSMRQLNNFNNILDDELEYYNKNIIVPLDVKLNYCQDCYIKSTGNIII HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEECCCCCEEEECCCCEEE NGNGEYTSYLNAMKDIIFAKPNSVARGGFLDAQGNISVGVVGSSACVATALKVPKSGRIS ECCCCHHHHHHHHHHHEEECCCCCCCCCEEECCCCEEEEEECCHHHHHHHHCCCCCCCEE ATIAYPNTKFCFGNSTLILEEKLENITMYYDEHFRSIEISKSAYSRIGKYS EEEECCCCEEEECCCEEEEEEHHCCEEEEECCCCCEEEECHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA