| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is 187932871
Identifier: 187932871
GI number: 187932871
Start: 1437909
End: 1439231
Strand: Reverse
Name: 187932871
Synonym: CLL_A1396
Alternate gene names: NA
Gene position: 1439231-1437909 (Counterclockwise)
Preceding gene: 187932657
Following gene: 187934146
Centisome position: 37.87
GC content: 30.69
Gene sequence:
>1323_bases ATGAAAAGAAAAGATGTATTGGAATTAAAAAAACGTTTAAAAAAGGATGACTGTACATTTACCAAAATGTGTGGTTGCTA CGTAGATTCTCAAAAAGATATTGTATTAAGTATTAAAGAAACATTTCTAAATCTAAAAGATGAAGAATTTTTCAAATATT TAGAGATTGCAAAAAAAACATTATCAGGAACAATCGGAAACAATCTTTTAGAACTTAACTTTCATCTTGATGAAGAAAAT ATAGGTGGTAAACAACATTCTCTAATGGAGCTAAAAAAAAGTAAGTTAAAAGATAATGCTCTACTTGATAAATTCTATAA ATCAATTATTGATAATTATGACTATACTGGTAATTTTCTAATACTTGTTTTTCATGATGCTTACGATGTTGTCACAAAAA CTACGGATAATGCAAAATTAGATGAATCCGAAGAAGTATACGAATACCTATTATGCGCAATATGTCCAGTATCACTTTCA AAACCAGGTCTTGGATACCTTGAAGATGAAAATCGAATTGGAGCACGTATTAGAGACTGGATAGTTGGAGCTCCAGATCT TGGATTTGTCTTTCCAGCTTTTACAGATCGTAGTACTGATATTCATTCTGTTATGTACTATACCAAAAATGTTAAAGATC CACATGCAGAATTAATGGAAGGCGGACTCGGCTGTGATTCAAAGCAAACTGCTACTGAGCAGAAAGAAACATTCCATACT ATTATTCGTAATGCAATTGGAAATGATGATGAAAAATCGGATGACTTATTAATAGAAATACAAGAAACTCTTAATAACAT GGTAGATGAACATGAAATTGTCAATGATAAGAATGGTGAACCTATTATCTTGACCAATGATAAAATTCAAAATATTTTAA CTGAAAGTGGAATTTCAGAAGAAATTACTGCAAAAATCGAAAAATCTTATACAGAAGAATTTGGTGATACCCCTCCTGTA GTAGAACATTTAATCGATACAAAAGTACTTGCAGCAAATGCTAAAAGGAAAAAAGAAAAGGAACTTGAGCAAAAAGTACA AATATTAGAACAAAGGTTAGAAGAAACAAAACAAGATATTACATTAGATTCAGACTTTGAATCAGATTTGAAATCAGAGA CTGATATCCTCTTAGAAACAGCGTCTGACCTTGAGATAGAATCCAAAACCACTACTACTCCAAACTATGATGTTGTACTT CGAGTAAAACCTCAAAAAGTAGCTCAAATAAAATCACAAATAATTGATGGACAAAAATGTATTGTCATTCCTATGGATGA TAATGAACAAGCTAATGTAAACGGCACTGATACATTGCTTTAA
Upstream 100 bases:
>100_bases TTTAGTCACTTGCAGAGTGATTTCTTGAACACTATACTATATTATGTAGCATATTCTTAGCTATGCACTAATAAAAACTC ATGAAATGAGAGGACTATAT
Downstream 100 bases:
>100_bases TTAATTATAAACCATATTTTTTATCACTATTTATACTGGTACTTTTAGAAAAATTTACAACAAAATCACTAAGACAACTT TGGATCCGTGGATTTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKRKDVLELKKRLKKDDCTFTKMCGCYVDSQKDIVLSIKETFLNLKDEEFFKYLEIAKKTLSGTIGNNLLELNFHLDEEN IGGKQHSLMELKKSKLKDNALLDKFYKSIIDNYDYTGNFLILVFHDAYDVVTKTTDNAKLDESEEVYEYLLCAICPVSLS KPGLGYLEDENRIGARIRDWIVGAPDLGFVFPAFTDRSTDIHSVMYYTKNVKDPHAELMEGGLGCDSKQTATEQKETFHT IIRNAIGNDDEKSDDLLIEIQETLNNMVDEHEIVNDKNGEPIILTNDKIQNILTESGISEEITAKIEKSYTEEFGDTPPV VEHLIDTKVLAANAKRKKEKELEQKVQILEQRLEETKQDITLDSDFESDLKSETDILLETASDLEIESKTTTTPNYDVVL RVKPQKVAQIKSQIIDGQKCIVIPMDDNEQANVNGTDTLL
Sequences:
>Translated_440_residues MKRKDVLELKKRLKKDDCTFTKMCGCYVDSQKDIVLSIKETFLNLKDEEFFKYLEIAKKTLSGTIGNNLLELNFHLDEEN IGGKQHSLMELKKSKLKDNALLDKFYKSIIDNYDYTGNFLILVFHDAYDVVTKTTDNAKLDESEEVYEYLLCAICPVSLS KPGLGYLEDENRIGARIRDWIVGAPDLGFVFPAFTDRSTDIHSVMYYTKNVKDPHAELMEGGLGCDSKQTATEQKETFHT IIRNAIGNDDEKSDDLLIEIQETLNNMVDEHEIVNDKNGEPIILTNDKIQNILTESGISEEITAKIEKSYTEEFGDTPPV VEHLIDTKVLAANAKRKKEKELEQKVQILEQRLEETKQDITLDSDFESDLKSETDILLETASDLEIESKTTTTPNYDVVL RVKPQKVAQIKSQIIDGQKCIVIPMDDNEQANVNGTDTLL >Mature_440_residues MKRKDVLELKKRLKKDDCTFTKMCGCYVDSQKDIVLSIKETFLNLKDEEFFKYLEIAKKTLSGTIGNNLLELNFHLDEEN IGGKQHSLMELKKSKLKDNALLDKFYKSIIDNYDYTGNFLILVFHDAYDVVTKTTDNAKLDESEEVYEYLLCAICPVSLS KPGLGYLEDENRIGARIRDWIVGAPDLGFVFPAFTDRSTDIHSVMYYTKNVKDPHAELMEGGLGCDSKQTATEQKETFHT IIRNAIGNDDEKSDDLLIEIQETLNNMVDEHEIVNDKNGEPIILTNDKIQNILTESGISEEITAKIEKSYTEEFGDTPPV VEHLIDTKVLAANAKRKKEKELEQKVQILEQRLEETKQDITLDSDFESDLKSETDILLETASDLEIESKTTTTPNYDVVL RVKPQKVAQIKSQIIDGQKCIVIPMDDNEQANVNGTDTLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50028; Mature: 50028
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKDVLELKKRLKKDDCTFTKMCGCYVDSQKDIVLSIKETFLNLKDEEFFKYLEIAKKT CCCHHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHH LSGTIGNNLLELNFHLDEENIGGKQHSLMELKKSKLKDNALLDKFYKSIIDNYDYTGNFL HHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE ILVFHDAYDVVTKTTDNAKLDESEEVYEYLLCAICPVSLSKPGLGYLEDENRIGARIRDW EEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH IVGAPDLGFVFPAFTDRSTDIHSVMYYTKNVKDPHAELMEGGLGCDSKQTATEQKETFHT CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH IIRNAIGNDDEKSDDLLIEIQETLNNMVDEHEIVNDKNGEPIILTNDKIQNILTESGISE HHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCH EITAKIEKSYTEEFGDTPPVVEHLIDTKVLAANAKRKKEKELEQKVQILEQRLEETKQDI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC TLDSDFESDLKSETDILLETASDLEIESKTTTTPNYDVVLRVKPQKVAQIKSQIIDGQKC CCCCCHHHHHHCCHHHEEECCCCCEECCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCE IVIPMDDNEQANVNGTDTLL EEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKRKDVLELKKRLKKDDCTFTKMCGCYVDSQKDIVLSIKETFLNLKDEEFFKYLEIAKKT CCCHHHHHHHHHHCCCCCCHHHHHHHEECCCCCEEEEEHHHHHCCCHHHHHHHHHHHHHH LSGTIGNNLLELNFHLDEENIGGKQHSLMELKKSKLKDNALLDKFYKSIIDNYDYTGNFL HHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEE ILVFHDAYDVVTKTTDNAKLDESEEVYEYLLCAICPVSLSKPGLGYLEDENRIGARIRDW EEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH IVGAPDLGFVFPAFTDRSTDIHSVMYYTKNVKDPHAELMEGGLGCDSKQTATEQKETFHT CCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH IIRNAIGNDDEKSDDLLIEIQETLNNMVDEHEIVNDKNGEPIILTNDKIQNILTESGISE HHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCCCCH EITAKIEKSYTEEFGDTPPVVEHLIDTKVLAANAKRKKEKELEQKVQILEQRLEETKQDI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCC TLDSDFESDLKSETDILLETASDLEIESKTTTTPNYDVVLRVKPQKVAQIKSQIIDGQKC CCCCCHHHHHHCCHHHEEECCCCCEECCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCE IVIPMDDNEQANVNGTDTLL EEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA