Click here to switch to the map view.

The map label for this gene is csoR [H]

Identifier: 187932832

GI number: 187932832

Start: 3483624

End: 3483890

Strand: Reverse

Name: csoR [H]

Synonym: CLL_A3312

Alternate gene names: 187932832

Gene position: 3483890-3483624 (Counterclockwise)

Preceding gene: 187933336

Following gene: 187935431

Centisome position: 91.67

GC content: 26.59

Gene sequence:

>267_bases
ATGAGTGAAGAAAGAAAAAAAGCATTACAATCTTTAAAAACAGCCAAGGGACAAATTGAAGGAATAATAAAAATGATAGA
AGATGACAGGTATTGTATAGATGTAGCAAATCAAATATTAGCGGCACAATCATTACTTAAAAAAGCTGATTTAATGATAT
TACAAGGACATTTGCGTCATTGTGTTAAGGAAGCATGTTTAAATAATAATCCAGATGAAAAAATAGAAGAAATGAATAAA
GTATTAGAAAAAATAATTTCTAAATAG

Upstream 100 bases:

>100_bases
TTTATAAAATTATAATGATTTTTTTGATTGACAAATACATAAACAAGTTTATAATTAAATACAAATACATACCCCCTCCA
CGGGGGTGGGAGGATTAAGT

Downstream 100 bases:

>100_bases
AAATATATTTGAAACGTGTTTATATATGCATAAGTAAAATTGAACTGAATTCAATTACAATGTCATTTTACCTATTGCAT
ATATAAACATATATTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSEERKKALQSLKTAKGQIEGIIKMIEDDRYCIDVANQILAAQSLLKKADLMILQGHLRHCVKEACLNNNPDEKIEEMNK
VLEKIISK

Sequences:

>Translated_88_residues
MSEERKKALQSLKTAKGQIEGIIKMIEDDRYCIDVANQILAAQSLLKKADLMILQGHLRHCVKEACLNNNPDEKIEEMNK
VLEKIISK
>Mature_87_residues
SEERKKALQSLKTAKGQIEGIIKMIEDDRYCIDVANQILAAQSLLKKADLMILQGHLRHCVKEACLNNNPDEKIEEMNKV
LEKIISK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. It is part of the cso operon involved in the cellular response to increasing concentrations of copper inside the bacterium, which can be highly toxic. In the presence of copper, CsoR fu

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10021; Mature: 9890

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEERKKALQSLKTAKGQIEGIIKMIEDDRYCIDVANQILAAQSLLKKADLMILQGHLRH
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKEACLNNNPDEKIEEMNKVLEKIISK
HHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SEERKKALQSLKTAKGQIEGIIKMIEDDRYCIDVANQILAAQSLLKKADLMILQGHLRH
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVKEACLNNNPDEKIEEMNKVLEKIISK
HHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]