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The map label for this gene is ykcC [H]

Identifier: 187932605

GI number: 187932605

Start: 3394347

End: 3395276

Strand: Reverse

Name: ykcC [H]

Synonym: CLL_A3242

Alternate gene names: 187932605

Gene position: 3395276-3394347 (Counterclockwise)

Preceding gene: 187935545

Following gene: 187933233

Centisome position: 89.34

GC content: 27.74

Gene sequence:

>930_bases
ATGGAAATATCAGTTGTTATACCGGTATATGGTTGTAAGGGAGCAGTATTTGAGCTTCATGAAAGATTAGTTGGATCGTT
AGAAAAAATTACAGATTCTTTTGAAATTATTATGGTAAATGATAATTGTCCGCAAAATTCATGGGAAGAAATAAAAAAAG
TATGTTATATAGATAAAAGAGTAAGAGGAATAAATTTATCTAGAAATTTTGGTCAGATAAAAGCAATAACAGCGGGGTTA
GATAACGTAAAAGGTAATTGGGTAGTAGTGATGGATTGTGATCTACAAGATAGACCAGAAGAGATTATTAATCTTTATAA
TAAGGCTAAAGAAGGATATGATGTAGTCTTTGCAAGAAGAGCTAATAGGCAAGATAAGGCTATAAAGAAATTTTTATCAA
AGACATTTTATAAAGTTTATGGGTATTTTACAGATGGAAATATAGATAATACAATATCTAATTTTAGTATAAGTAAAAAA
ATAGTTATAAAAAATTATTGTGAAATGAGAGAACAAAATAGAGCATTTACTTTGTTTATAAAGTGGTTAGGATTTAAACA
AACTGCAATTGATGTTGATCACAATGATAGAGCAGAGGGAGAATCTTCATACAGTCTGAAAAGAAGACTTAAAATGGCAT
TTGAAATTATTACAGCACAATCTAATAAGCCATTAACAATTTCAATAACTGGTGGAGCAATAATGGCAATTATTTCATTT
TTAGTAGTTATATATAGAGTCGCAGTATATTTTCTTACAGGTGTATCAACAACTGGATGGACTAGCATCATTGTATCTAT
ATATTTAGTTGGTGGATTAATTTTGATGAATTTAGGCATACTTGGAATATATATTGGAAACATATTTAATGAAAATAAAA
ATAGACCTTTATATGTTATTAAAGATTACTTAAATAAAAAGGAGGGTTAA

Upstream 100 bases:

>100_bases
TTAAGATTACCTTTATATTATGGATTAGATGATACAGAAGTAGATTATATAATTAAAAAAATAAAGTTATTTTATAAAAG
GTAATGTGAGGATTAAAAAT

Downstream 100 bases:

>100_bases
CTATGGTTGTTGTAATAGGAGCAACTGGTTTTATTGGAGTATATACAGTAGATAAGTTAATGCAAGATGGATATGATGTA
ATTGCTACTGGGAGAAATAA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MEISVVIPVYGCKGAVFELHERLVGSLEKITDSFEIIMVNDNCPQNSWEEIKKVCYIDKRVRGINLSRNFGQIKAITAGL
DNVKGNWVVVMDCDLQDRPEEIINLYNKAKEGYDVVFARRANRQDKAIKKFLSKTFYKVYGYFTDGNIDNTISNFSISKK
IVIKNYCEMREQNRAFTLFIKWLGFKQTAIDVDHNDRAEGESSYSLKRRLKMAFEIITAQSNKPLTISITGGAIMAIISF
LVVIYRVAVYFLTGVSTTGWTSIIVSIYLVGGLILMNLGILGIYIGNIFNENKNRPLYVIKDYLNKKEG

Sequences:

>Translated_309_residues
MEISVVIPVYGCKGAVFELHERLVGSLEKITDSFEIIMVNDNCPQNSWEEIKKVCYIDKRVRGINLSRNFGQIKAITAGL
DNVKGNWVVVMDCDLQDRPEEIINLYNKAKEGYDVVFARRANRQDKAIKKFLSKTFYKVYGYFTDGNIDNTISNFSISKK
IVIKNYCEMREQNRAFTLFIKWLGFKQTAIDVDHNDRAEGESSYSLKRRLKMAFEIITAQSNKPLTISITGGAIMAIISF
LVVIYRVAVYFLTGVSTTGWTSIIVSIYLVGGLILMNLGILGIYIGNIFNENKNRPLYVIKDYLNKKEG
>Mature_309_residues
MEISVVIPVYGCKGAVFELHERLVGSLEKITDSFEIIMVNDNCPQNSWEEIKKVCYIDKRVRGINLSRNFGQIKAITAGL
DNVKGNWVVVMDCDLQDRPEEIINLYNKAKEGYDVVFARRANRQDKAIKKFLSKTFYKVYGYFTDGNIDNTISNFSISKK
IVIKNYCEMREQNRAFTLFIKWLGFKQTAIDVDHNDRAEGESSYSLKRRLKMAFEIITAQSNKPLTISITGGAIMAIISF
LVVIYRVAVYFLTGVSTTGWTSIIVSIYLVGGLILMNLGILGIYIGNIFNENKNRPLYVIKDYLNKKEG

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=303, Percent_Identity=29.7029702970297, Blast_Score=151, Evalue=6e-38,
Organism=Escherichia coli, GI1788588, Length=306, Percent_Identity=29.4117647058824, Blast_Score=144, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 35189; Mature: 35189

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEISVVIPVYGCKGAVFELHERLVGSLEKITDSFEIIMVNDNCPQNSWEEIKKVCYIDKR
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
VRGINLSRNFGQIKAITAGLDNVKGNWVVVMDCDLQDRPEEIINLYNKAKEGYDVVFARR
HCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEC
ANRQDKAIKKFLSKTFYKVYGYFTDGNIDNTISNFSISKKIVIKNYCEMREQNRAFTLFI
CCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
KWLGFKQTAIDVDHNDRAEGESSYSLKRRLKMAFEIITAQSNKPLTISITGGAIMAIISF
EECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHH
LVVIYRVAVYFLTGVSTTGWTSIIVSIYLVGGLILMNLGILGIYIGNIFNENKNRPLYVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KDYLNKKEG
EHHCCCCCC
>Mature Secondary Structure
MEISVVIPVYGCKGAVFELHERLVGSLEKITDSFEIIMVNDNCPQNSWEEIKKVCYIDKR
CEEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHH
VRGINLSRNFGQIKAITAGLDNVKGNWVVVMDCDLQDRPEEIINLYNKAKEGYDVVFARR
HCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEEC
ANRQDKAIKKFLSKTFYKVYGYFTDGNIDNTISNFSISKKIVIKNYCEMREQNRAFTLFI
CCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
KWLGFKQTAIDVDHNDRAEGESSYSLKRRLKMAFEIITAQSNKPLTISITGGAIMAIISF
EECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCEEEEECCHHHHHHHHH
LVVIYRVAVYFLTGVSTTGWTSIIVSIYLVGGLILMNLGILGIYIGNIFNENKNRPLYVI
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
KDYLNKKEG
EHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]