Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

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The map label for this gene is ykuE [H]

Identifier: 187932566

GI number: 187932566

Start: 2242843

End: 2243715

Strand: Reverse

Name: ykuE [H]

Synonym: CLL_A2152

Alternate gene names: 187932566

Gene position: 2243715-2242843 (Counterclockwise)

Preceding gene: 187933317

Following gene: 187935299

Centisome position: 59.04

GC content: 28.06

Gene sequence:

>873_bases
GTGAATATTATAAAAAAAATATCAAGAAGAATCGTTGTATTATTTTTTGCAATAATGTTTCTTATTGGATTTATATTTTT
TTGTATCTGGCAAAACAATAGTATTATTATTTCGAAATTTGATTATGTAAGCTCTAAGATACCAGATGAATTTAATGATT
TTACAATAGTTCATATTTCTGATTTACACAATAAAATGTTTGGCGAAAATCAAGTTAAGATATTAAATAAAGTTAAAAGT
ATTTCCCCAGATGTAATTGTTATTACAGGTGATTTAATAGACAGACGTAAATATAATTTAGATACTGCAATGATGTTTGT
TTCAGGAGCTACAAAAATAGCGCCTGTATATTATGTATCAGGTAATCACGAAGCTTGGTCTGGAAAATTTTCTATGATTA
AAGAAAAATTGATAGATATAGGTGTTCACATTGTTGATAATACAGCATTTAAACTTTCAAGGGGGAACAGTTCAATACAC
ATATTAGGATTATCGGATCCAGATTTTCTTACATCTGATTACATGGATGGTACAAACACCAATAAAATGAAAGAACAATT
AAATAGATGGTCAACGAATGAAAATTTTAAAATACTACTTTCTCATAGGCCAGAACTATTTGACTTATATTATGAAAACA
ATATGGATTTAATTTTTACAGGACATGCTCATGGAGGACAAGTCAGAATTCCTGGGATAGGTGGATTATTTGCTCCAGAT
CAAGGAATATTTCCTAAGTATACAAGTGGAATATATAATAAAGATTTATCTACAATGTTTGTAAGTAGAGGATTGGGTAA
TAGTATTTGTCCTTTAAGGATTTTTAATAGACCAGAAATCGTTGAAGTAACATTAAATAACAGTCAGCATTAA

Upstream 100 bases:

>100_bases
GTTTTGATTGAAATAAGAGAATTACTTAAAAAGCAAGATAAAGGTTTATAATAATCACAATTATATATCTTATTAATGTA
TAGAAAAATAGTGATAAGAG

Downstream 100 bases:

>100_bases
TTGAAAAAATTGATTTTAGGAATGATTTTGGTGCTGATTTGTTTATGTATGCAGGACAAAGTTAAATAAGTTGATTAGAA
ATATAAAGAGTTGTAATGAT

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS
ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH
ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD
QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH

Sequences:

>Translated_290_residues
MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS
ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH
ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD
QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH
>Mature_290_residues
MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHISDLHNKMFGENQVKILNKVKS
ISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVSGNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIH
ILGLSDPDFLTSDYMDGTNTNKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD
QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH

Specific function: Unknown

COG id: COG1408

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

Organism=Homo sapiens, GI210031196, Length=264, Percent_Identity=25, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI210031210, Length=261, Percent_Identity=24.904214559387, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI87081695, Length=245, Percent_Identity=26.1224489795918, Blast_Score=76, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115535028, Length=290, Percent_Identity=25.1724137931034, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 33019; Mature: 33019

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHIS
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHCCCCCCCCEEEEEEE
DLHNKMFGENQVKILNKVKSISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVS
HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHEEEEECCCCEEEEEEEEC
GNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIHILGLSDPDFLTSDYMDGTNT
CCCCCCCCHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEEEECCCCCCCHHCCCCCCCC
NKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD
HHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCC
QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH
CCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCC
>Mature Secondary Structure
MNIIKKISRRIVVLFFAIMFLIGFIFFCIWQNNSIIISKFDYVSSKIPDEFNDFTIVHIS
CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECHHHHHCCCCCCCCEEEEEEE
DLHNKMFGENQVKILNKVKSISPDVIVITGDLIDRRKYNLDTAMMFVSGATKIAPVYYVS
HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHEEEEECCCCEEEEEEEEC
GNHEAWSGKFSMIKEKLIDIGVHIVDNTAFKLSRGNSSIHILGLSDPDFLTSDYMDGTNT
CCCCCCCCHHHHHHHHHHHHCEEEECCCEEEEECCCCEEEEEECCCCCCCHHCCCCCCCC
NKMKEQLNRWSTNENFKILLSHRPELFDLYYENNMDLIFTGHAHGGQVRIPGIGGLFAPD
HHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCEEEECCCCCCCCCC
QGIFPKYTSGIYNKDLSTMFVSRGLGNSICPLRIFNRPEIVEVTLNNSQH
CCCCCCHHCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]