| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
Click here to switch to the map view.
The map label for this gene is 187932527
Identifier: 187932527
GI number: 187932527
Start: 3448132
End: 3448350
Strand: Reverse
Name: 187932527
Synonym: CLL_A3283
Alternate gene names: NA
Gene position: 3448350-3448132 (Counterclockwise)
Preceding gene: 187933553
Following gene: 187934823
Centisome position: 90.74
GC content: 28.77
Gene sequence:
>219_bases ATGGGGAATAAATATATAGTTGATAGAATTGAAGAGAGCCATGTCATACTTCAATCATTCAATGGCGATATGTTAGATAT TATGCGTTCTAAGACTAAAGGTGACATAAAAGATGGTGACGTTTTGATTAAAAACGGAGATATATTTATTATAGATGTTG AAGAAACCTTAAAAAGAAAACAAGCAATAAACAAGATGATGAAAAATATGTGGAAATAA
Upstream 100 bases:
>100_bases TTGTTAAGATATTTTATTTAGATTAGAGCTATATTTTAAGTTATATTTTATATAAAAATGACTTAAAATATAGTTAAAAC AAAGAGAGGATATTTATAAT
Downstream 100 bases:
>100_bases GGTTTTTTAGATATTTTCACAAATCACATGGAAAGGATGATACAATGCAAGGCAACAATAAAAAGAAGAAAAACGGATAT ATTACAATGGTAATATATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MGNKYIVDRIEESHVILQSFNGDMLDIMRSKTKGDIKDGDVLIKNGDIFIIDVEETLKRKQAINKMMKNMWK
Sequences:
>Translated_72_residues MGNKYIVDRIEESHVILQSFNGDMLDIMRSKTKGDIKDGDVLIKNGDIFIIDVEETLKRKQAINKMMKNMWK >Mature_71_residues GNKYIVDRIEESHVILQSFNGDMLDIMRSKTKGDIKDGDVLIKNGDIFIIDVEETLKRKQAINKMMKNMWK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8401; Mature: 8270
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 8.3 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNKYIVDRIEESHVILQSFNGDMLDIMRSKTKGDIKDGDVLIKNGDIFIIDVEETLKRK CCCCHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCEEEECCCEEEEEHHHHHHHH QAINKMMKNMWK HHHHHHHHHHCC >Mature Secondary Structure GNKYIVDRIEESHVILQSFNGDMLDIMRSKTKGDIKDGDVLIKNGDIFIIDVEETLKRK CCCHHHCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCEEEECCCEEEEEHHHHHHHH QAINKMMKNMWK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA