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The map label for this gene is 187932452

Identifier: 187932452

GI number: 187932452

Start: 1716045

End: 1716701

Strand: Reverse

Name: 187932452

Synonym: CLL_A1652

Alternate gene names: NA

Gene position: 1716701-1716045 (Counterclockwise)

Preceding gene: 187935210

Following gene: 187935384

Centisome position: 45.17

GC content: 23.14

Gene sequence:

>657_bases
ATGGGAGATGATCAAAATTTCGGTGAATTTTTAAAACAATTGCTCCAAGATAATAAAATTTCTATGGGTAAATTAAGTAT
TGAAACAGGTATTAATAAATCAACTATATCTAGACTTGCAAATAACAAACAAAAACCAAATATAAATCACTTAAAAAAAT
TTTCAAAAATATTAAATGTATCATTAGAAGAATTGTTTAAAGCCTCTGGTATTGATTTAAAAGAAAATAGCTTAACAGAA
GAAATTAATTTAGTTGATACAACTATTGAAGAGGATTATTTTGATACAGATGATATATTAAAATTTTCAGATAAACTAAA
AGATACTAATTTAGAAAAAAATGTGAAAAAAGAATTAAATAAATGTGAAAAATATGTACAAACAGAGGAGGGAAGGGATT
TAATCCATAGAGATTTTAACAATAAAATAGAAAATTTATCACAAACAGGTTCATTTATATCAACACTTAAAGAACTTTAT
GAAAAATTTTGTTCTATAAATATAACAGAAAAAGAGTTTATTTTGATAGGAGCTGCCTTAATTTATTTTGTTCTACCAAT
TGATCTTATACCTGATTTTATATTTCCTATTGGATTTATTGATGATATGATAGCAGTTAAATTAGTGTTAAATATTCTTA
ATGCATCCACTAACTAA

Upstream 100 bases:

>100_bases
TGCTATAAAATCAACAGTATGTTTCACAAAATTATAAATAACTCATAGTATATTATAAAAGTAATTATCATATGATTTGA
TCTACAAAGGAGGTGCAATT

Downstream 100 bases:

>100_bases
ATTTGTAGTAATTATAATTATTAAAAAATTCACTAGAAAACTTATATTTCTAGTGAATTTCTTCTTTAAATTAATTACTT
TCTTTTTTCCTAAGAGCATC

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; XRE Family Transcriptional Regulator; Transcription Regulator

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MGDDQNFGEFLKQLLQDNKISMGKLSIETGINKSTISRLANNKQKPNINHLKKFSKILNVSLEELFKASGIDLKENSLTE
EINLVDTTIEEDYFDTDDILKFSDKLKDTNLEKNVKKELNKCEKYVQTEEGRDLIHRDFNNKIENLSQTGSFISTLKELY
EKFCSINITEKEFILIGAALIYFVLPIDLIPDFIFPIGFIDDMIAVKLVLNILNASTN

Sequences:

>Translated_218_residues
MGDDQNFGEFLKQLLQDNKISMGKLSIETGINKSTISRLANNKQKPNINHLKKFSKILNVSLEELFKASGIDLKENSLTE
EINLVDTTIEEDYFDTDDILKFSDKLKDTNLEKNVKKELNKCEKYVQTEEGRDLIHRDFNNKIENLSQTGSFISTLKELY
EKFCSINITEKEFILIGAALIYFVLPIDLIPDFIFPIGFIDDMIAVKLVLNILNASTN
>Mature_217_residues
GDDQNFGEFLKQLLQDNKISMGKLSIETGINKSTISRLANNKQKPNINHLKKFSKILNVSLEELFKASGIDLKENSLTEE
INLVDTTIEEDYFDTDDILKFSDKLKDTNLEKNVKKELNKCEKYVQTEEGRDLIHRDFNNKIENLSQTGSFISTLKELYE
KFCSINITEKEFILIGAALIYFVLPIDLIPDFIFPIGFIDDMIAVKLVLNILNASTN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24950; Mature: 24819

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDDQNFGEFLKQLLQDNKISMGKLSIETGINKSTISRLANNKQKPNINHLKKFSKILNV
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SLEELFKASGIDLKENSLTEEINLVDTTIEEDYFDTDDILKFSDKLKDTNLEKNVKKELN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
KCEKYVQTEEGRDLIHRDFNNKIENLSQTGSFISTLKELYEKFCSINITEKEFILIGAAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYFVLPIDLIPDFIFPIGFIDDMIAVKLVLNILNASTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GDDQNFGEFLKQLLQDNKISMGKLSIETGINKSTISRLANNKQKPNINHLKKFSKILNV
CCCCCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHH
SLEELFKASGIDLKENSLTEEINLVDTTIEEDYFDTDDILKFSDKLKDTNLEKNVKKELN
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
KCEKYVQTEEGRDLIHRDFNNKIENLSQTGSFISTLKELYEKFCSINITEKEFILIGAAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IYFVLPIDLIPDFIFPIGFIDDMIAVKLVLNILNASTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA