| Definition | Clostridium botulinum B str. Eklund 17B, complete genome. |
|---|---|
| Accession | NC_010674 |
| Length | 3,800,327 |
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The map label for this gene is artP [H]
Identifier: 187932424
GI number: 187932424
Start: 3442298
End: 3443134
Strand: Reverse
Name: artP [H]
Synonym: CLL_A3280
Alternate gene names: 187932424
Gene position: 3443134-3442298 (Counterclockwise)
Preceding gene: 187935712
Following gene: 187933393
Centisome position: 90.6
GC content: 31.66
Gene sequence:
>837_bases ATGAATAAGGGCTTATTAAAAAAATTAGGATTAGTTGTAGCAATTGGGGCAATGGCAATAAGCATAGTTGGATGTGCAGG AAATAAAAATACAGCAGGGAGCAAAGATGGAAAAGAAACAGCTTCAGTGCTGGAAGCAATAAAACAAAAAGGTAAGCTTG TAGTTGGAACAAGTGCAGATTATCCACCATATGAATTTCATAAAGAGGTAGATGGAAAAGATCAAATAGTAGGATTTGAT ATTAGTATAGCAAAATCATTAGCAGAAGACTTAGGAGTAGAGCTACAAATAAATGATATGGATTTTGATGGCTTACTTAT AGCACTTCAAGCTGGAAAAGTGGATATGGTATTTGCAGGTATGACACCTACTGATGAAAGAAAGGAAAATGCAGATTTTT CAGATATATATTATACAGCACAACATGGAGTTATAGTTAGAAAAGGTGAAGAAGGAAAGATAAAATCAATTGATGATTTA AAAGATAAGAAGATTGGTGTACAAAAGGGGTCAATACAAGAAAGGTTAGCAAATGAAAAGATCCCAGATGCTCAAAAGAA AGCATTAGGAAAGGTTACTGATCTAGTGTTAGATTTAAAAAATAATAAAGTAGATGCAATATTAGTTGAATTACCAGTTG CAGAGTTTAACTGTGAAAAGAATTCAGATATAGCTTTAACAAATGTTATATTAGAAGATTCAGAAGGTGGATCAGCAATA GCAATGAGCAAGGGTTCAGATGATTTAAAGAGTGAAATAAATAAAACAATACAAAAATTAAAAGATGAAGGTAAAGTAGA TAAATTTGTAATAGAAGCAAATGAAATGGTGGAATAA
Upstream 100 bases:
>100_bases TACATTTACTATTGCATAAATATAAAGATTGGGTGTATAATTATACCAAGAAGTAAATAGAAGGAAATAAATTTTTGTGA ATAATTAGGGGGAGTTAGTA
Downstream 100 bases:
>100_bases ATTATTGTTTCATCCCTTAGTTTCAACAAATTTCAAATAGAATTTGTTGGACCTCAGGGGTGAAAATAGAGAGGGGGAGA AGTTTTGAATTTTACATTTT
Product: amino acid ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNKGLLKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYEFHKEVDGKDQIVGFD ISIAKSLAEDLGVELQINDMDFDGLLIALQAGKVDMVFAGMTPTDERKENADFSDIYYTAQHGVIVRKGEEGKIKSIDDL KDKKIGVQKGSIQERLANEKIPDAQKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGGSAI AMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE
Sequences:
>Translated_278_residues MNKGLLKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYEFHKEVDGKDQIVGFD ISIAKSLAEDLGVELQINDMDFDGLLIALQAGKVDMVFAGMTPTDERKENADFSDIYYTAQHGVIVRKGEEGKIKSIDDL KDKKIGVQKGSIQERLANEKIPDAQKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGGSAI AMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE >Mature_278_residues MNKGLLKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSADYPPYEFHKEVDGKDQIVGFD ISIAKSLAEDLGVELQINDMDFDGLLIALQAGKVDMVFAGMTPTDERKENADFSDIYYTAQHGVIVRKGEEGKIKSIDDL KDKKIGVQKGSIQERLANEKIPDAQKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGGSAI AMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE
Specific function: Part of a binding-protein-dependent transport system for arginine [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=262, Percent_Identity=32.0610687022901, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1787031, Length=215, Percent_Identity=32.5581395348837, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787088, Length=231, Percent_Identity=28.5714285714286, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1787085, Length=220, Percent_Identity=27.7272727272727, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1788649, Length=225, Percent_Identity=30.2222222222222, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=24.1379310344828, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 29957; Mature: 29957
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKGLLKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSAD CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC YPPYEFHKEVDGKDQIVGFDISIAKSLAEDLGVELQINDMDFDGLLIALQAGKVDMVFAG CCCHHHHHCCCCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEEEC MTPTDERKENADFSDIYYTAQHGVIVRKGEEGKIKSIDDLKDKKIGVQKGSIQERLANEK CCCCCCCCCCCCHHHEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCC IPDAQKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGGSAI CCCHHHHHHHHHHHHHEECCCCCEEEEEEEECHHHCCCCCCCCEEEEEEEEECCCCCCEE AMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCC >Mature Secondary Structure MNKGLLKKLGLVVAIGAMAISIVGCAGNKNTAGSKDGKETASVLEAIKQKGKLVVGTSAD CCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC YPPYEFHKEVDGKDQIVGFDISIAKSLAEDLGVELQINDMDFDGLLIALQAGKVDMVFAG CCCHHHHHCCCCCCCEEEECHHHHHHHHHHCCCEEEEECCCCCCEEEEEECCCEEEEEEC MTPTDERKENADFSDIYYTAQHGVIVRKGEEGKIKSIDDLKDKKIGVQKGSIQERLANEK CCCCCCCCCCCCHHHEEEEECCCEEEEECCCCCCCCCHHHHHHHCCCCCCHHHHHHHCCC IPDAQKKALGKVTDLVLDLKNNKVDAILVELPVAEFNCEKNSDIALTNVILEDSEGGSAI CCCHHHHHHHHHHHHHEECCCCCEEEEEEEECHHHCCCCCCCCEEEEEEEEECCCCCCEE AMSKGSDDLKSEINKTIQKLKDEGKVDKFVIEANEMVE EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]