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The map label for this gene is 187928880

Identifier: 187928880

GI number: 187928880

Start: 1891005

End: 1891928

Strand: Reverse

Name: 187928880

Synonym: Rpic_1798

Alternate gene names: NA

Gene position: 1891928-1891005 (Counterclockwise)

Preceding gene: 187928881

Following gene: 187928879

Centisome position: 47.99

GC content: 61.58

Gene sequence:

>924_bases
ATGGACACCAGTATTTTCTTCGGCGGCTCGGTCATCGCTGCGTTTGTCGCCGGCATGATCGCGCTGTTCGCGCCGTGCTG
CCTTTCAGTCATGTTGCCGGCCTATTTCGCCAGCTCCTTTCAGAATCGAAGCCGACTGGTCGCCATGAGCTTCGTCTTCG
CCGCCGGCGTTGGGACCGTCATTCTGCCGTTGGTCATGGGTTCCATCGCGCTACGCCAGCTGTTTGTTACGCAGCATGCT
GCCATCTATCTGCTGGGGGGCTCGATCATGCTTGGCATGGCGCTTTTTACCTTGCTGGGTGGCAAGCTGCAACTGCCGAT
GCCGGCGCGGCGCGCAGCCGCAGACACTGGGCCATTCGGCATCTACACGCTTGGCATGTTTTCGGGTGTAGCCAGTGCAT
GTTGCGCCCCTGTGCTGGCCGGAGTCCTCGCGCTTTCCAGCCTCGCGTCATCCGCAGCGCTCGCTGCTGGATTGGGTAGC
GCCTACGTATTCGGGATGGTCGCGCCACTCTTCGCCATCTCGCTGCTGTGGGAGCGGTTCGACTGGCGCTCCAGTGTCCT
GTTTCGGACACGAATGGTGACATGGCGCATCGGCCCTCTGCAGCGCACGCTATCCGTGTCCATGTTGATGAGTGCAGCGC
TGCTCGGTGTCATGGGGGCCCTCGCCATTTGGGAGGCGTTTTCCACCGACTCGATGTCGACGTCGAGCCACTGGTCATTG
GCCGTTGCCGTGCAGTTGCAACACGTCGGTCGCAGTGTCACGCAAGCCTTGTTGGTCGTGCCGAACTGGCTGATGGCCGT
GGTTCTTCTGTTTTCGATCGCGGCACTCGGCTGGCGAGCCCGATCGCAATGGCGAAGGAACGGCCTGTCGGATGGCGCCG
CTGGCGTCGAAGAAGAACCGACGCCTTCACGGAGAATCGAATGA

Upstream 100 bases:

>100_bases
GCCTACTTGGTTCCCGGGCGATTGAAGGCCAACCTGCGTGACTGCGTTGTTGTCGGCTCCGTAAAAAGCGAGGCCATCAA
ATAGGCGGCGGGAGAGGCAG

Downstream 100 bases:

>100_bases
GACAAGTCCGCGGAAAGGCAATCCAGGGGCGCGGCCGCGGCTTGGCACGCCTACCCAGGGCATTCCTCGTTGCTGTCATC
GGCATGCTGGTGCTCTCCGC

Product: cytochrome c biogenesis protein transmembrane protein

Products: NA

Alternate protein names: Integral Membrane Cytochrome Biogenesis Protein; Cytochrome C Biogenesis Protein

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MDTSIFFGGSVIAAFVAGMIALFAPCCLSVMLPAYFASSFQNRSRLVAMSFVFAAGVGTVILPLVMGSIALRQLFVTQHA
AIYLLGGSIMLGMALFTLLGGKLQLPMPARRAAADTGPFGIYTLGMFSGVASACCAPVLAGVLALSSLASSAALAAGLGS
AYVFGMVAPLFAISLLWERFDWRSSVLFRTRMVTWRIGPLQRTLSVSMLMSAALLGVMGALAIWEAFSTDSMSTSSHWSL
AVAVQLQHVGRSVTQALLVVPNWLMAVVLLFSIAALGWRARSQWRRNGLSDGAAGVEEEPTPSRRIE

Sequences:

>Translated_307_residues
MDTSIFFGGSVIAAFVAGMIALFAPCCLSVMLPAYFASSFQNRSRLVAMSFVFAAGVGTVILPLVMGSIALRQLFVTQHA
AIYLLGGSIMLGMALFTLLGGKLQLPMPARRAAADTGPFGIYTLGMFSGVASACCAPVLAGVLALSSLASSAALAAGLGS
AYVFGMVAPLFAISLLWERFDWRSSVLFRTRMVTWRIGPLQRTLSVSMLMSAALLGVMGALAIWEAFSTDSMSTSSHWSL
AVAVQLQHVGRSVTQALLVVPNWLMAVVLLFSIAALGWRARSQWRRNGLSDGAAGVEEEPTPSRRIE
>Mature_307_residues
MDTSIFFGGSVIAAFVAGMIALFAPCCLSVMLPAYFASSFQNRSRLVAMSFVFAAGVGTVILPLVMGSIALRQLFVTQHA
AIYLLGGSIMLGMALFTLLGGKLQLPMPARRAAADTGPFGIYTLGMFSGVASACCAPVLAGVLALSSLASSAALAAGLGS
AYVFGMVAPLFAISLLWERFDWRSSVLFRTRMVTWRIGPLQRTLSVSMLMSAALLGVMGALAIWEAFSTDSMSTSSHWSL
AVAVQLQHVGRSVTQALLVVPNWLMAVVLLFSIAALGWRARSQWRRNGLSDGAAGVEEEPTPSRRIE

Specific function: Unknown

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32511; Mature: 32511

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSIFFGGSVIAAFVAGMIALFAPCCLSVMLPAYFASSFQNRSRLVAMSFVFAAGVGTV
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPLVMGSIALRQLFVTQHAAIYLLGGSIMLGMALFTLLGGKLQLPMPARRAAADTGPFG
HHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCHH
IYTLGMFSGVASACCAPVLAGVLALSSLASSAALAAGLGSAYVFGMVAPLFAISLLWERF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWRSSVLFRTRMVTWRIGPLQRTLSVSMLMSAALLGVMGALAIWEAFSTDSMSTSSHWSL
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVAVQLQHVGRSVTQALLVVPNWLMAVVLLFSIAALGWRARSQWRRNGLSDGAAGVEEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TPSRRIE
CCCCCCC
>Mature Secondary Structure
MDTSIFFGGSVIAAFVAGMIALFAPCCLSVMLPAYFASSFQNRSRLVAMSFVFAAGVGTV
CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPLVMGSIALRQLFVTQHAAIYLLGGSIMLGMALFTLLGGKLQLPMPARRAAADTGPFG
HHHHHHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHCCCEECCCCHHHHCCCCCCHH
IYTLGMFSGVASACCAPVLAGVLALSSLASSAALAAGLGSAYVFGMVAPLFAISLLWERF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DWRSSVLFRTRMVTWRIGPLQRTLSVSMLMSAALLGVMGALAIWEAFSTDSMSTSSHWSL
HHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
AVAVQLQHVGRSVTQALLVVPNWLMAVVLLFSIAALGWRARSQWRRNGLSDGAAGVEEEP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TPSRRIE
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA