Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928879
Identifier: 187928879
GI number: 187928879
Start: 1890316
End: 1891008
Strand: Reverse
Name: 187928879
Synonym: Rpic_1797
Alternate gene names: NA
Gene position: 1891008-1890316 (Counterclockwise)
Preceding gene: 187928880
Following gene: 187928878
Centisome position: 47.96
GC content: 60.75
Gene sequence:
>693_bases ATGAGACAAGTCCGCGGAAAGGCAATCCAGGGGCGCGGCCGCGGCTTGGCACGCCTACCCAGGGCATTCCTCGTTGCTGT CATCGGCATGCTGGTGCTCTCCGCCATCGTTTGGTGGAGCTATCCGAACAAGCGACAGGCGATCCTTGATGGCGCGCAGC CTACGCCCGCAAGCGCGTCATCTGGCCGTTACCCGTTTCAGACGGGTGACCCGGGTCCGGGTACGCTTGCGCCTCCGATT CAGTTGCGCGGCGTCGGTGGCAGGGATTTCGATCTCCGCAGGCTACGCGGAACGACGGTCCTGCTGTATTTCCAAGAAGG TGTCACCTGCCAGTCGTGCTGGGATCAAGACAGGGATATTGCCCGGCACTTCAGCGAATTCCGTGCGCTCGGAATCGACA CGATCGTCACCATCACCACGGACCCCATCGATCTGCTGAAAAAGAAGGCGTCCGATACTGACATCGTCACGCCGGTGCTC TCCGATCCGGATCTGGCTGTGTCCAGGGCGTACCACGCCAATGACTACGGAATGATGGGAACTAGGCGGGATGGTCACAC CTTCATAGTGGTCGGCCCGGATGGCCGTATCCAATGGCGAGCGGACTACGGTGGCGCTCCGGCTTACACCATGTATGTGC CGGTCGATGTTTTGGTCGCAGACCTGCGCCGAGGCCTTCATCGAGACAAATGA
Upstream 100 bases:
>100_bases CGGCACTCGGCTGGCGAGCCCGATCGCAATGGCGAAGGAACGGCCTGTCGGATGGCGCCGCTGGCGTCGAAGAAGAACCG ACGCCTTCACGGAGAATCGA
Downstream 100 bases:
>100_bases GAACCGGCCATGGAACCGCTGAACGTCATCCTTCTGGTGCAGGCGCACTGCGCCTTCTGTGAGTCTGCCAAAGCCATGCT TGTGCGGCTGTCGGCGGATT
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MRQVRGKAIQGRGRGLARLPRAFLVAVIGMLVLSAIVWWSYPNKRQAILDGAQPTPASASSGRYPFQTGDPGPGTLAPPI QLRGVGGRDFDLRRLRGTTVLLYFQEGVTCQSCWDQDRDIARHFSEFRALGIDTIVTITTDPIDLLKKKASDTDIVTPVL SDPDLAVSRAYHANDYGMMGTRRDGHTFIVVGPDGRIQWRADYGGAPAYTMYVPVDVLVADLRRGLHRDK
Sequences:
>Translated_230_residues MRQVRGKAIQGRGRGLARLPRAFLVAVIGMLVLSAIVWWSYPNKRQAILDGAQPTPASASSGRYPFQTGDPGPGTLAPPI QLRGVGGRDFDLRRLRGTTVLLYFQEGVTCQSCWDQDRDIARHFSEFRALGIDTIVTITTDPIDLLKKKASDTDIVTPVL SDPDLAVSRAYHANDYGMMGTRRDGHTFIVVGPDGRIQWRADYGGAPAYTMYVPVDVLVADLRRGLHRDK >Mature_230_residues MRQVRGKAIQGRGRGLARLPRAFLVAVIGMLVLSAIVWWSYPNKRQAILDGAQPTPASASSGRYPFQTGDPGPGTLAPPI QLRGVGGRDFDLRRLRGTTVLLYFQEGVTCQSCWDQDRDIARHFSEFRALGIDTIVTITTDPIDLLKKKASDTDIVTPVL SDPDLAVSRAYHANDYGMMGTRRDGHTFIVVGPDGRIQWRADYGGAPAYTMYVPVDVLVADLRRGLHRDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25365; Mature: 25365
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQVRGKAIQGRGRGLARLPRAFLVAVIGMLVLSAIVWWSYPNKRQAILDGAQPTPASAS CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCC SGRYPFQTGDPGPGTLAPPIQLRGVGGRDFDLRRLRGTTVLLYFQEGVTCQSCWDQDRDI CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHEECCCEEEEEEECCCCHHHHHCCCHHH ARHFSEFRALGIDTIVTITTDPIDLLKKKASDTDIVTPVLSDPDLAVSRAYHANDYGMMG HHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEECCCCCCHHHHHEEECCCCCCCC TRRDGHTFIVVGPDGRIQWRADYGGAPAYTMYVPVDVLVADLRRGLHRDK CCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRQVRGKAIQGRGRGLARLPRAFLVAVIGMLVLSAIVWWSYPNKRQAILDGAQPTPASAS CCCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCCCCCCCC SGRYPFQTGDPGPGTLAPPIQLRGVGGRDFDLRRLRGTTVLLYFQEGVTCQSCWDQDRDI CCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHEECCCEEEEEEECCCCHHHHHCCCHHH ARHFSEFRALGIDTIVTITTDPIDLLKKKASDTDIVTPVLSDPDLAVSRAYHANDYGMMG HHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCCEEEECCCCCCHHHHHEEECCCCCCCC TRRDGHTFIVVGPDGRIQWRADYGGAPAYTMYVPVDVLVADLRRGLHRDK CCCCCCEEEEECCCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA