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The map label for this gene is 187928813

Identifier: 187928813

GI number: 187928813

Start: 1824325

End: 1824543

Strand: Reverse

Name: 187928813

Synonym: Rpic_1730

Alternate gene names: NA

Gene position: 1824543-1824325 (Counterclockwise)

Preceding gene: 187928816

Following gene: 187928812

Centisome position: 46.28

GC content: 59.82

Gene sequence:

>219_bases
ATGCAAGCGGCAATCGTGGATATTCGCGAGAAGATCGATCTGTACGGGCTCACGGCATTGGATCTCGGCTTCAAGGGCGA
TGGCACGGCGAGAAGCAAGCCCCCGGCCAAATACCGGGATGAGGCGGGTAATTCCTGGACGGGACGTGGCAAGAGGCCGG
GATGGCTGGTTGCCCATCTGAGTGCTGGCCGCCAGATCGAAGAGTTTCTGACCGCCTAA

Upstream 100 bases:

>100_bases
AAATCCAGAGGCTCTTTATAACCAAGAGGCATGCATGCAAACTTCTACATAACTGGCGGGCTTATGATAGCGAATTGGCC
TTATCTTGGCATGACCCCAA

Downstream 100 bases:

>100_bases
TGTGATCTGGCTGCCGAATGACGTGGGCGCCGGCACCGCCTTCTCGTTGACAAGGGCTTCTTCGCGGCTAGCTTGGTCCA
AGAAGACATATGCCCTCCCC

Product: histone family protein nucleoid-structuring protein H-NS

Products: NA

Alternate protein names: Nucleoid Protein H-NS; Histone-Like Nucleoid-Structuring Protein H-NS

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQAAIVDIREKIDLYGLTALDLGFKGDGTARSKPPAKYRDEAGNSWTGRGKRPGWLVAHLSAGRQIEEFLTA

Sequences:

>Translated_72_residues
MQAAIVDIREKIDLYGLTALDLGFKGDGTARSKPPAKYRDEAGNSWTGRGKRPGWLVAHLSAGRQIEEFLTA
>Mature_72_residues
MQAAIVDIREKIDLYGLTALDLGFKGDGTARSKPPAKYRDEAGNSWTGRGKRPGWLVAHLSAGRQIEEFLTA

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7873; Mature: 7873

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAAIVDIREKIDLYGLTALDLGFKGDGTARSKPPAKYRDEAGNSWTGRGKRPGWLVAHL
CCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
SAGRQIEEFLTA
CCCCHHHHHHCC
>Mature Secondary Structure
MQAAIVDIREKIDLYGLTALDLGFKGDGTARSKPPAKYRDEAGNSWTGRGKRPGWLVAHL
CCCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
SAGRQIEEFLTA
CCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA