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The map label for this gene is 187928812

Identifier: 187928812

GI number: 187928812

Start: 1823256

End: 1824149

Strand: Reverse

Name: 187928812

Synonym: Rpic_1729

Alternate gene names: NA

Gene position: 1824149-1823256 (Counterclockwise)

Preceding gene: 187928813

Following gene: 187928810

Centisome position: 46.27

GC content: 62.98

Gene sequence:

>894_bases
ATGGACACACTTTGGCTGAACAATCCGGAACGCGCTTACGCTGATTGGCAGGAGCGGGAGGCCGAAGGCGTCGACGGCCA
GCACTTCTCTGCACGCTCGCGTGCCCAGCATCAGGCGATGTTCGAGAAGTTCCTGCGCTACCTTCGCGAGACGGGCCGCG
ACCTGGCCAACTACGGAGATGAGCACGTAGCGGCATTTTGTGAATCGGTCGGCGCCCGATCGGCCGCGACAAGGATGCGG
TACCTGAAGCTCCTTGACCGCGTCGGCCGGCAACTCGTGCGCGCCGATGTACGCGTGTCAAATCCGGCTTCGGAGCAGTT
GCGCACGGGCCATTGGCCTGATGAGGATCAGCCCCTGTTCCTCCCCGAAGACAAGGACGCACTGCTCCAGGCCTACACGC
AGCCGGCGCCCGATGACGGATTGCGAGAAATCCGAGGGCGTGCGGTCGTAGCGCTCTACCTGGCGACCGGCGTGACACTG
TCGGAAGGCATTGCCACTGAGCTTGATGACCTGCAGCTCGATGCCACTCTGCCCTACCTGCACATCAAAGCGAAGGCGGC
GCGCGGTGCTCGAACGGTCCCCATCACACCATTCGCAATACCGGCGTTGCGGACGTGGCTCACCCGACGGGCAGCAGAGG
GTACCCAGGGCCGAGCCTTGCTCACTTTGCACACTGACGGGGCGCGGATCAATGAGGCTAGTGTCGGGCGAATCGTTAAA
GCCGCACTGACCACGATCGATTTCGTTGCACCCGATATGAGCCCGCGCGTCCTGCGCAATACGGTCTGCCGGCGCCTGCT
CCTCGATGGCGTCGACTATGTCGAAGTGAACCGAATCCTGGGGCTCTCCAGCGTTCGCACTGTCGATCGGATTGCCGCGA
CCATTGAGCGCTGA

Upstream 100 bases:

>100_bases
GTCCAAGAAGACATATGCCCTCCCCTGTGGAGGCGGGGTTTCGGCGAAGCCGAGATGTGGTCGAAGCTGTACTTCAGTAT
ATAGCAGGCCGTAAATTGCG

Downstream 100 bases:

>100_bases
ACAGTCCGCCGATTCGCCAGACATCGAACTGGCATTGTTGGTCGAGAATACCGCCGCCTACCCGCACCCCACCGACGACC
ACCGGAGGCGGCCGAATCAT

Product: integrase family protein

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Integrase/Recombinase; Integrase/Recombinase Protein; Integrase; Phage Integrase / Tyr Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MDTLWLNNPERAYADWQEREAEGVDGQHFSARSRAQHQAMFEKFLRYLRETGRDLANYGDEHVAAFCESVGARSAATRMR
YLKLLDRVGRQLVRADVRVSNPASEQLRTGHWPDEDQPLFLPEDKDALLQAYTQPAPDDGLREIRGRAVVALYLATGVTL
SEGIATELDDLQLDATLPYLHIKAKAARGARTVPITPFAIPALRTWLTRRAAEGTQGRALLTLHTDGARINEASVGRIVK
AALTTIDFVAPDMSPRVLRNTVCRRLLLDGVDYVEVNRILGLSSVRTVDRIAATIER

Sequences:

>Translated_297_residues
MDTLWLNNPERAYADWQEREAEGVDGQHFSARSRAQHQAMFEKFLRYLRETGRDLANYGDEHVAAFCESVGARSAATRMR
YLKLLDRVGRQLVRADVRVSNPASEQLRTGHWPDEDQPLFLPEDKDALLQAYTQPAPDDGLREIRGRAVVALYLATGVTL
SEGIATELDDLQLDATLPYLHIKAKAARGARTVPITPFAIPALRTWLTRRAAEGTQGRALLTLHTDGARINEASVGRIVK
AALTTIDFVAPDMSPRVLRNTVCRRLLLDGVDYVEVNRILGLSSVRTVDRIAATIER
>Mature_297_residues
MDTLWLNNPERAYADWQEREAEGVDGQHFSARSRAQHQAMFEKFLRYLRETGRDLANYGDEHVAAFCESVGARSAATRMR
YLKLLDRVGRQLVRADVRVSNPASEQLRTGHWPDEDQPLFLPEDKDALLQAYTQPAPDDGLREIRGRAVVALYLATGVTL
SEGIATELDDLQLDATLPYLHIKAKAARGARTVPITPFAIPALRTWLTRRAAEGTQGRALLTLHTDGARINEASVGRIVK
AALTTIDFVAPDMSPRVLRNTVCRRLLLDGVDYVEVNRILGLSSVRTVDRIAATIER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33155; Mature: 33155

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTLWLNNPERAYADWQEREAEGVDGQHFSARSRAQHQAMFEKFLRYLRETGRDLANYGD
CCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCH
EHVAAFCESVGARSAATRMRYLKLLDRVGRQLVRADVRVSNPASEQLRTGHWPDEDQPLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEE
LPEDKDALLQAYTQPAPDDGLREIRGRAVVALYLATGVTLSEGIATELDDLQLDATLPYL
CCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEHHHHHCCCHHCCCHHHHHHCEECCCCCEE
HIKAKAARGARTVPITPFAIPALRTWLTRRAAEGTQGRALLTLHTDGARINEASVGRIVK
EEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH
AALTTIDFVAPDMSPRVLRNTVCRRLLLDGVDYVEVNRILGLSSVRTVDRIAATIER
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDTLWLNNPERAYADWQEREAEGVDGQHFSARSRAQHQAMFEKFLRYLRETGRDLANYGD
CCCCCCCCCHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCH
EHVAAFCESVGARSAATRMRYLKLLDRVGRQLVRADVRVSNPASEQLRTGHWPDEDQPLF
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCEE
LPEDKDALLQAYTQPAPDDGLREIRGRAVVALYLATGVTLSEGIATELDDLQLDATLPYL
CCCCHHHHHHHHCCCCCCHHHHHHCCCCEEEHHHHHCCCHHCCCHHHHHHCEECCCCCEE
HIKAKAARGARTVPITPFAIPALRTWLTRRAAEGTQGRALLTLHTDGARINEASVGRIVK
EEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHH
AALTTIDFVAPDMSPRVLRNTVCRRLLLDGVDYVEVNRILGLSSVRTVDRIAATIER
HHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA