Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187928772
Identifier: 187928772
GI number: 187928772
Start: 1781083
End: 1781310
Strand: Reverse
Name: 187928772
Synonym: Rpic_1689
Alternate gene names: NA
Gene position: 1781310-1781083 (Counterclockwise)
Preceding gene: 187928773
Following gene: 187928771
Centisome position: 45.18
GC content: 57.89
Gene sequence:
>228_bases ATGCCGGCAGACAAATTCGGCCGATTCATGACCAGCGATACATTTTTGACGCGCGCGGACGCGGCAGTTGCCGCGGCAGT ACGCCGCCTCGAAAAGCAAGGCATCGTACCGGCTTACATCCGACGCCAACCAGAGCCGCAGGCAAAATCTGAAGCGGCCC CAAGCGACATCCCTCCTGATGTGAGCCAGGACGTCACGAGTAAGCATGAATCTCCTGGTTCTAAGTGA
Upstream 100 bases:
>100_bases ATGCCCGCGACCTACGCTATTGCAATCGCCCTGTGGAGAGACGCGCTGCCGCGAAGGCGTGGACGGAGTAATCTGGGGGG CAGGACAAATGGAGCAAGCC
Downstream 100 bases:
>100_bases CCTGCACCTCGAATTCACTACCCTCGACATCGACACGACGGGCGCTGATGTCATCGTGCTTGCTGGTGACATTCATATAG GCAAGCGAGGAATGCCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 75; Mature: 74
Protein sequence:
>75_residues MPADKFGRFMTSDTFLTRADAAVAAAVRRLEKQGIVPAYIRRQPEPQAKSEAAPSDIPPDVSQDVTSKHESPGSK
Sequences:
>Translated_75_residues MPADKFGRFMTSDTFLTRADAAVAAAVRRLEKQGIVPAYIRRQPEPQAKSEAAPSDIPPDVSQDVTSKHESPGSK >Mature_74_residues PADKFGRFMTSDTFLTRADAAVAAAVRRLEKQGIVPAYIRRQPEPQAKSEAAPSDIPPDVSQDVTSKHESPGSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8125; Mature: 7994
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADKFGRFMTSDTFLTRADAAVAAAVRRLEKQGIVPAYIRRQPEPQAKSEAAPSDIPPD CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCC VSQDVTSKHESPGSK CCHHHHHHCCCCCCC >Mature Secondary Structure PADKFGRFMTSDTFLTRADAAVAAAVRRLEKQGIVPAYIRRQPEPQAKSEAAPSDIPPD CCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCC VSQDVTSKHESPGSK CCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA