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The map label for this gene is 187927761

Identifier: 187927761

GI number: 187927761

Start: 706053

End: 706625

Strand: Reverse

Name: 187927761

Synonym: Rpic_0665

Alternate gene names: NA

Gene position: 706625-706053 (Counterclockwise)

Preceding gene: 187927762

Following gene: 187927760

Centisome position: 17.92

GC content: 63.87

Gene sequence:

>573_bases
ATGAACGCGTCTCGTCTGCGGGCCGGGTTCACGCTGGCTGAGCTCGTCGTCGTCCTGAGCGTGATATCGATCCTTGCGAT
GTTCGCCGCGCCCGCCGCGTTGAATTGGTGGCAACGCGAGACTGTCGTCGTTCTGGCCGACCGCTTTGTCAGCGCGATCT
CGCTGGCGCAGACCATGTCGCGCAATCAGCGTGCGTGGGTTCACCTCGGCCCGTGCAACGCTGAGCAGGGTTGGTCGTCG
GGATGGGCGTTGTATATGATGCCCTCGCCGCAAACCCAGGCGACGCCGCTTGAACCCGGCACCGAAGATATCTTGATGCG
CGTGTCGCCGCCTGTGGTGCCGCCCGTCGAATTTGCGTTCACGGCGTCACAGCGGGATGTCGACACCCTCTCTTTTGCAC
CTGTGGGATACTCGCGACAGCGTAACGGCAGCCAGCTCTACGGCACGCTGACAATCCGATCTGGAGCACATGAGCGGCGG
GTCCGCATCAGCTCCGCAGGCCGCGCCCGCATCTGCGATCCGGCCAAGGACACCAAAACGTGCGGCGCCAGCGCCTCGGC
TAACGACGATTAA

Upstream 100 bases:

>100_bases
ACGCGGGCACCGACTGCGGCGCGCTTATCCTGCGCAACACCGGCGAACGGTTCACGCAGATCGGCAATGCGCGCCAACCG
GCATCGCCCGCATGCTGGCC

Downstream 100 bases:

>100_bases
CCCAAACTCCCGCATTTTTTGCTCATGTTCTCCGACTTCGACCACGCCATGATGCAGCGCGCCCTGGCGCTGGCCGAGAA
GGGCTTGTTCACCACCACGC

Product: putative type 4 fimbrial pilin related transmembrane protein

Products: NA

Alternate protein names: Pilus Assembly Protein Fim; Type IV Pilus Assembly Protein Fimt; TYPE 4 FIMBRIAL PILIN FimT-Related TRANSMEMBRANE PROTEIN; Type IV Pilus Assembly Protein FimT

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MNASRLRAGFTLAELVVVLSVISILAMFAAPAALNWWQRETVVVLADRFVSAISLAQTMSRNQRAWVHLGPCNAEQGWSS
GWALYMMPSPQTQATPLEPGTEDILMRVSPPVVPPVEFAFTASQRDVDTLSFAPVGYSRQRNGSQLYGTLTIRSGAHERR
VRISSAGRARICDPAKDTKTCGASASANDD

Sequences:

>Translated_190_residues
MNASRLRAGFTLAELVVVLSVISILAMFAAPAALNWWQRETVVVLADRFVSAISLAQTMSRNQRAWVHLGPCNAEQGWSS
GWALYMMPSPQTQATPLEPGTEDILMRVSPPVVPPVEFAFTASQRDVDTLSFAPVGYSRQRNGSQLYGTLTIRSGAHERR
VRISSAGRARICDPAKDTKTCGASASANDD
>Mature_190_residues
MNASRLRAGFTLAELVVVLSVISILAMFAAPAALNWWQRETVVVLADRFVSAISLAQTMSRNQRAWVHLGPCNAEQGWSS
GWALYMMPSPQTQATPLEPGTEDILMRVSPPVVPPVEFAFTASQRDVDTLSFAPVGYSRQRNGSQLYGTLTIRSGAHERR
VRISSAGRARICDPAKDTKTCGASASANDD

Specific function: Unknown

COG id: COG4970

COG function: function code NU; Tfp pilus assembly protein FimT

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20624; Mature: 20624

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASRLRAGFTLAELVVVLSVISILAMFAAPAALNWWQRETVVVLADRFVSAISLAQTMS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHC
RNQRAWVHLGPCNAEQGWSSGWALYMMPSPQTQATPLEPGTEDILMRVSPPVVPPVEFAF
CCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCEEE
TASQRDVDTLSFAPVGYSRQRNGSQLYGTLTIRSGAHERRVRISSAGRARICDPAKDTKT
ECCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCHH
CGASASANDD
CCCCCCCCCC
>Mature Secondary Structure
MNASRLRAGFTLAELVVVLSVISILAMFAAPAALNWWQRETVVVLADRFVSAISLAQTMS
CCCHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEHHHHHHHHHHHHHHC
RNQRAWVHLGPCNAEQGWSSGWALYMMPSPQTQATPLEPGTEDILMRVSPPVVPPVEFAF
CCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEECCCCCCCCCCEEE
TASQRDVDTLSFAPVGYSRQRNGSQLYGTLTIRSGAHERRVRISSAGRARICDPAKDTKT
ECCCCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCHH
CGASASANDD
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA