Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is eryC1 [H]
Identifier: 187927730
GI number: 187927730
Start: 674632
End: 675756
Strand: Reverse
Name: eryC1 [H]
Synonym: Rpic_0634
Alternate gene names: 187927730
Gene position: 675756-674632 (Counterclockwise)
Preceding gene: 187927731
Following gene: 187927729
Centisome position: 17.14
GC content: 56.89
Gene sequence:
>1125_bases ATGATTCCGTTTCTCGACCTTAAGAGTATCAATGCGCGGCAACGAGCCGAATTGATTTCAGCATTCACCGAAGTTCTCGA TGCCGGCTGGTTCATCCATGGCAAACAATGCGAAGCATTCGAAGCCGACTTTGCCGCTTACTGTGAAGCCAAGCACTGTA TCGGTATCAGTAACGGGTTGGACGCGCTGCATCTCATTCTGCGGGCCATGTCCATCGGAAAAGGTGACGAAGTCATCGTG CCGTCCAACACATTTATCGCTACATGGTTGGCGGTCACCTTCGCCGGAGCAACGCCGGTTCCGGTGGAACCACGCGAAGA CACGTGCAATCTTGATCCTAGCTTGATAGCTGCGGCAATCACGCCTCGGACGCGTGCAATCATCCCCGTTCATCTGTATG GCCAGCCCGCAGATATGGATCCCATTCTGGAGATCGCGCATCAACATGGTCTGAAAGTCATCGAAGATGCCGCCCAATCT CACGGGGCACGATACCGCGGCAAGCGCACGGGCAGTCTTGGCGATGCGGCGGCCTTCAGCTTCTACCCGGGAAAGAACCT CGGAGCGCTCGGCGATGGCGGCGCTGTGACAACGTCCGATACCGCATTGGCGCAACGCATTAGGATGCTGTCCAACTATG GCTCTCAGAAAAAATATGTGCATGAGGCGGCGGGGTTCAATGCCCGGCTGGACGAAATTCAGGCCGCCATGCTGCGCGCG AAACTGGTATTGCTTGACGCCGACAATGCGCGACGTCGCTCAATCGCCGATCGCTACACGAGGGCTCTGATCGATTGCGG CCTCGGACTGCCCATCCTGGCCAATGATGTGGAATCAGCGTGGCACATCTACGCAATTCACCACCCAAACCGCGACGCGC TCCAGCGTGCGCTTAGCGAACGAGGGGTAGGTACAGTTGTGCACTACCCAACGCCGCCACATCTACAAGGAGCTTACCGC GACCTTCGTTTGGGAGAAGGCGCGTACCCGATCAGCGAGCGGATCCATCGCGAAACGCTGAGCCTTCCGATGTCGCCGGT CATGACTGACGTACAAGTGGATGAAGTGATCCACACAGTTCGTTCGGTATGTGGTGAGCTTGCAGTGGATGTCACGAACC TGTGA
Upstream 100 bases:
>100_bases TAGCGAATTGGATAGAAGCAGCCAACGCGCTCGCCAACACGCAGTGCGCCCGGTAAGCGTGGCTTAAGGAAATAACAGTA ACTGTGCCGAGATTTTATCG
Downstream 100 bases:
>100_bases ATCTAGTTCGCACTAGCCTTCTTAACGGCATCGCGGTGATGGTGAAGACCATCGCCGCGCTTGTCCTGAACAAAGTGTTC GCTGTGACGGTCGGCCCAGC
Product: glutamine--scyllo-inositol transaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MIPFLDLKSINARQRAELISAFTEVLDAGWFIHGKQCEAFEADFAAYCEAKHCIGISNGLDALHLILRAMSIGKGDEVIV PSNTFIATWLAVTFAGATPVPVEPREDTCNLDPSLIAAAITPRTRAIIPVHLYGQPADMDPILEIAHQHGLKVIEDAAQS HGARYRGKRTGSLGDAAAFSFYPGKNLGALGDGGAVTTSDTALAQRIRMLSNYGSQKKYVHEAAGFNARLDEIQAAMLRA KLVLLDADNARRRSIADRYTRALIDCGLGLPILANDVESAWHIYAIHHPNRDALQRALSERGVGTVVHYPTPPHLQGAYR DLRLGEGAYPISERIHRETLSLPMSPVMTDVQVDEVIHTVRSVCGELAVDVTNL
Sequences:
>Translated_374_residues MIPFLDLKSINARQRAELISAFTEVLDAGWFIHGKQCEAFEADFAAYCEAKHCIGISNGLDALHLILRAMSIGKGDEVIV PSNTFIATWLAVTFAGATPVPVEPREDTCNLDPSLIAAAITPRTRAIIPVHLYGQPADMDPILEIAHQHGLKVIEDAAQS HGARYRGKRTGSLGDAAAFSFYPGKNLGALGDGGAVTTSDTALAQRIRMLSNYGSQKKYVHEAAGFNARLDEIQAAMLRA KLVLLDADNARRRSIADRYTRALIDCGLGLPILANDVESAWHIYAIHHPNRDALQRALSERGVGTVVHYPTPPHLQGAYR DLRLGEGAYPISERIHRETLSLPMSPVMTDVQVDEVIHTVRSVCGELAVDVTNL >Mature_374_residues MIPFLDLKSINARQRAELISAFTEVLDAGWFIHGKQCEAFEADFAAYCEAKHCIGISNGLDALHLILRAMSIGKGDEVIV PSNTFIATWLAVTFAGATPVPVEPREDTCNLDPSLIAAAITPRTRAIIPVHLYGQPADMDPILEIAHQHGLKVIEDAAQS HGARYRGKRTGSLGDAAAFSFYPGKNLGALGDGGAVTTSDTALAQRIRMLSNYGSQKKYVHEAAGFNARLDEIQAAMLRA KLVLLDADNARRRSIADRYTRALIDCGLGLPILANDVESAWHIYAIHHPNRDALQRALSERGVGTVVHYPTPPHLQGAYR DLRLGEGAYPISERIHRETLSLPMSPVMTDVQVDEVIHTVRSVCGELAVDVTNL
Specific function: Sensor protein that transfers the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of erythromycin biosynthesis genes (Potential) [H]
COG id: COG0399
COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the degT/dnrJ/eryC1 family [H]
Homologues:
Organism=Escherichia coli, GI145693159, Length=371, Percent_Identity=37.1967654986523, Blast_Score=205, Evalue=3e-54, Organism=Escherichia coli, GI2367285, Length=310, Percent_Identity=34.5161290322581, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000653 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]
EC number: NA
Molecular weight: Translated: 40684; Mature: 40684
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPFLDLKSINARQRAELISAFTEVLDAGWFIHGKQCEAFEADFAAYCEAKHCIGISNGL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCHHHHCCCCCCH DALHLILRAMSIGKGDEVIVPSNTFIATWLAVTFAGATPVPVEPREDTCNLDPSLIAAAI HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC TPRTRAIIPVHLYGQPADMDPILEIAHQHGLKVIEDAAQSHGARYRGKRTGSLGDAAAFS CCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FYPGKNLGALGDGGAVTTSDTALAQRIRMLSNYGSQKKYVHEAAGFNARLDEIQAAMLRA ECCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH KLVLLDADNARRRSIADRYTRALIDCGLGLPILANDVESAWHIYAIHHPNRDALQRALSE EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHH RGVGTVVHYPTPPHLQGAYRDLRLGEGAYPISERIHRETLSLPMSPVMTDVQVDEVIHTV CCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RSVCGELAVDVTNL HHHHHHHHHHHCCC >Mature Secondary Structure MIPFLDLKSINARQRAELISAFTEVLDAGWFIHGKQCEAFEADFAAYCEAKHCIGISNGL CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHCHHHHCCCCCCH DALHLILRAMSIGKGDEVIVPSNTFIATWLAVTFAGATPVPVEPREDTCNLDPSLIAAAI HHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHC TPRTRAIIPVHLYGQPADMDPILEIAHQHGLKVIEDAAQSHGARYRGKRTGSLGDAAAFS CCCCCEEEEEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE FYPGKNLGALGDGGAVTTSDTALAQRIRMLSNYGSQKKYVHEAAGFNARLDEIQAAMLRA ECCCCCCCCCCCCCCEECCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHH KLVLLDADNARRRSIADRYTRALIDCGLGLPILANDVESAWHIYAIHHPNRDALQRALSE EEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCEEEEEEECCCHHHHHHHHHH RGVGTVVHYPTPPHLQGAYRDLRLGEGAYPISERIHRETLSLPMSPVMTDVQVDEVIHTV CCCEEEEECCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH RSVCGELAVDVTNL HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2575703 [H]