Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is wzxE [H]
Identifier: 187927729
GI number: 187927729
Start: 673388
End: 674635
Strand: Reverse
Name: wzxE [H]
Synonym: Rpic_0633
Alternate gene names: 187927729
Gene position: 674635-673388 (Counterclockwise)
Preceding gene: 187927730
Following gene: 187927728
Centisome position: 17.11
GC content: 52.8
Gene sequence:
>1248_bases GTGAATCTAGTTCGCACTAGCCTTCTTAACGGCATCGCGGTGATGGTGAAGACCATCGCCGCGCTTGTCCTGAACAAAGT GTTCGCTGTGACGGTCGGCCCAGCCGGCTATGCTTTGATTGGCCAATTGCAGAATACCGTTTCTATCATAACAAACGTCG GGAGCGGTGCGATCAATAACGGCGTAGTCAAGTACACCGCCGAGTACAGTTCGCTAGAGTCATCGCAGATAGCTGTGTGG CAAACGGCAACACGCATCTCGGCAATTTGCTCAATTGCCGTCGGTTGCGCCATCGCGCTCCTCGCGCTCCCCCTCTCACG CTTGTTCCTAGGGGCCGAGGATTATGCGCTAACCTTCGTGCTGTTCGGGCTTCTGCTGCCAGCATTCGTCCTTAACGCCC TGCTACTTGCAATTCTGAATGGCCGGAAAGAGATCGCGCGCTTCGTTGCTACCAATATTGCAGGGAGTCTGGTTACGCTT GCGCTGACTATCGGACTGACCCAGTGGAACGGGTTACGTGGCGCATTGATCGCACTAAGTATCAATCAGTCCGTCGCGCT TGTTGCAACTTTAATCATCTGCTGGCGAACAGCTTGGTTCACACTGCCAAAGCTCTGGGGACCGTTTAACCGAGAGATCG CTAGAAAGTTAGCGCACTTCGCGGTAATGTTGATTACCTCTGCCGTTGCGGCGCCAATTACACAAATATTAATCCGCTCC TATCTGGCGTCTGTGGTCGGATTGGAACAGGCTGGCCTGTGGCAAGCGGCGTGGAAGATCAGCGACATCTATCTGATGTT ACTGACGACCACCCTTGCCACCTATTTTCTGCCTCGTTTTGCTGAGTTGACTAGCCCGGAAACCATACGTCGTGAACTGC TGCATGCCGCAAGCATTCTCGCTCCGGCATTAGCCTTTGGACTCACAGCTGTTTATCTGACTCGTGGTTGGTGGATACCG CTATTGTTCTCTGCATCCTTTGATGGCATGCGTGAAGTTCTTCCGCTCCAGTTGCTCGGCGATTTCTTCAAAATGGCGGG CTGGCTTCTGGGTTACCTCGTACTCAGCAAGGCATTGAGCCGCTTATTTGTCGGTGCCGAAATTTTATTTTCCGTGAGCT TCTATTGTCTCACGCTAGCATTTGTGCCGTTGTTTGGCCTAAAGGGTGTCGTACTTGCGCACACCGTGAACTACATCGGT TATTGCGTAGCCTTATGGGTGGGCCTGAAACAGGCTCGAGCACTATGA
Upstream 100 bases:
>100_bases GCCTTCCGATGTCGCCGGTCATGACTGACGTACAAGTGGATGAAGTGATCCACACAGTTCGTTCGGTATGTGGTGAGCTT GCAGTGGATGTCACGAACCT
Downstream 100 bases:
>100_bases GCATTCTGCAGAATCACACCGCTCCGCTGGTGAGCGTACTGATACCGATATTTAACCATGCCAGATTCATCGAAAAGTGC TTAGATAGCCTCTTGTCGAC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNLVRTSLLNGIAVMVKTIAALVLNKVFAVTVGPAGYALIGQLQNTVSIITNVGSGAINNGVVKYTAEYSSLESSQIAVW QTATRISAICSIAVGCAIALLALPLSRLFLGAEDYALTFVLFGLLLPAFVLNALLLAILNGRKEIARFVATNIAGSLVTL ALTIGLTQWNGLRGALIALSINQSVALVATLIICWRTAWFTLPKLWGPFNREIARKLAHFAVMLITSAVAAPITQILIRS YLASVVGLEQAGLWQAAWKISDIYLMLLTTTLATYFLPRFAELTSPETIRRELLHAASILAPALAFGLTAVYLTRGWWIP LLFSASFDGMREVLPLQLLGDFFKMAGWLLGYLVLSKALSRLFVGAEILFSVSFYCLTLAFVPLFGLKGVVLAHTVNYIG YCVALWVGLKQARAL
Sequences:
>Translated_415_residues MNLVRTSLLNGIAVMVKTIAALVLNKVFAVTVGPAGYALIGQLQNTVSIITNVGSGAINNGVVKYTAEYSSLESSQIAVW QTATRISAICSIAVGCAIALLALPLSRLFLGAEDYALTFVLFGLLLPAFVLNALLLAILNGRKEIARFVATNIAGSLVTL ALTIGLTQWNGLRGALIALSINQSVALVATLIICWRTAWFTLPKLWGPFNREIARKLAHFAVMLITSAVAAPITQILIRS YLASVVGLEQAGLWQAAWKISDIYLMLLTTTLATYFLPRFAELTSPETIRRELLHAASILAPALAFGLTAVYLTRGWWIP LLFSASFDGMREVLPLQLLGDFFKMAGWLLGYLVLSKALSRLFVGAEILFSVSFYCLTLAFVPLFGLKGVVLAHTVNYIG YCVALWVGLKQARAL >Mature_415_residues MNLVRTSLLNGIAVMVKTIAALVLNKVFAVTVGPAGYALIGQLQNTVSIITNVGSGAINNGVVKYTAEYSSLESSQIAVW QTATRISAICSIAVGCAIALLALPLSRLFLGAEDYALTFVLFGLLLPAFVLNALLLAILNGRKEIARFVATNIAGSLVTL ALTIGLTQWNGLRGALIALSINQSVALVATLIICWRTAWFTLPKLWGPFNREIARKLAHFAVMLITSAVAAPITQILIRS YLASVVGLEQAGLWQAAWKISDIYLMLLTTTLATYFLPRFAELTSPETIRRELLHAASILAPALAFGLTAVYLTRGWWIP LLFSASFDGMREVLPLQLLGDFFKMAGWLLGYLVLSKALSRLFVGAEILFSVSFYCLTLAFVPLFGLKGVVLAHTVNYIG YCVALWVGLKQARAL
Specific function: Synthesis of enterobacterial common antigen (ECA). [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790227, Length=405, Percent_Identity=29.3827160493827, Blast_Score=166, Evalue=4e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002797 [H]
Pfam domain/function: PF01943 Polysacc_synt [H]
EC number: NA
Molecular weight: Translated: 44843; Mature: 44843
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLVRTSLLNGIAVMVKTIAALVLNKVFAVTVGPAGYALIGQLQNTVSIITNVGSGAINN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC GVVKYTAEYSSLESSQIAVWQTATRISAICSIAVGCAIALLALPLSRLFLGAEDYALTFV CEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LFGLLLPAFVLNALLLAILNGRKEIARFVATNIAGSLVTLALTIGLTQWNGLRGALIALS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE INQSVALVATLIICWRTAWFTLPKLWGPFNREIARKLAHFAVMLITSAVAAPITQILIRS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLASVVGLEQAGLWQAAWKISDIYLMLLTTTLATYFLPRFAELTSPETIRRELLHAASIL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH APALAFGLTAVYLTRGWWIPLLFSASFDGMREVLPLQLLGDFFKMAGWLLGYLVLSKALS HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLFVGAEILFSVSFYCLTLAFVPLFGLKGVVLAHTVNYIGYCVALWVGLKQARAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLVRTSLLNGIAVMVKTIAALVLNKVFAVTVGPAGYALIGQLQNTVSIITNVGSGAINN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCCCCC GVVKYTAEYSSLESSQIAVWQTATRISAICSIAVGCAIALLALPLSRLFLGAEDYALTFV CEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LFGLLLPAFVLNALLLAILNGRKEIARFVATNIAGSLVTLALTIGLTQWNGLRGALIALS HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE INQSVALVATLIICWRTAWFTLPKLWGPFNREIARKLAHFAVMLITSAVAAPITQILIRS CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLASVVGLEQAGLWQAAWKISDIYLMLLTTTLATYFLPRFAELTSPETIRRELLHAASIL HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH APALAFGLTAVYLTRGWWIPLLFSASFDGMREVLPLQLLGDFFKMAGWLLGYLVLSKALS HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLFVGAEILFSVSFYCLTLAFVPLFGLKGVVLAHTVNYIGYCVALWVGLKQARAL HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1379743; 9278503 [H]