Definition Ralstonia pickettii 12J chromosome chromosome 1, complete sequence.
Accession NC_010682
Length 3,942,557

Click here to switch to the map view.

The map label for this gene is 187927568

Identifier: 187927568

GI number: 187927568

Start: 502081

End: 502395

Strand: Reverse

Name: 187927568

Synonym: Rpic_0468

Alternate gene names: NA

Gene position: 502395-502081 (Counterclockwise)

Preceding gene: 187927569

Following gene: 187927563

Centisome position: 12.74

GC content: 65.08

Gene sequence:

>315_bases
ATGAGCATCACGCCCGGAACGCCCGCGCGCCGGCGGTGGATCGCCAATATGCGCTGGATCGCGGCACTGCTCGCGGTGTG
GTTTGTGGTGACGTTCGTGGTCGCGTTCTTTGCGCGCGACCTGTCGCAGCACTTCTTCAACTCGGACTGGACCTTCGCCT
ATTGGGTCGGCGCGCAGGGGGCGCCCATCGTCTATGTGCTGATTACCGTGCTGTATGCGTGGCGCACGAACCGGGCTGCA
GATGCAGCCGCACAACACGACGAAGCGGCGCAGCGCGATCCGTCGGAGTCATCCCACCTGCCGCCGTCCATCTGA

Upstream 100 bases:

>100_bases
TCGAGGTGCTCGACAACGTGTATCAAGTGTCGCCGCGGCTGGCGGGGGCGCGCTTTCGCATCACGCTGCACCGCTGCTCG
CCGAGCGAGGAACCCAACGC

Downstream 100 bases:

>100_bases
CCTGGACGTTACGCTTCACCCAGATGGCGCAGCTTCACAAAGGCCAACGCGGCCATCACCGCGTCGTTGAGCGCGTCGTG
CGCGTCCCACGTGGGCAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAA
DAAAQHDEAAQRDPSESSHLPPSI

Sequences:

>Translated_104_residues
MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAA
DAAAQHDEAAQRDPSESSHLPPSI
>Mature_103_residues
SITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQGAPIVYVLITVLYAWRTNRAAD
AAAQHDEAAQRDPSESSHLPPSI

Specific function: Unknown

COG id: COG4327

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11766; Mature: 11635

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
APIVYVLITVLYAWRTNRAADAAAQHDEAAQRDPSESSHLPPSI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SITPGTPARRRWIANMRWIAALLAVWFVVTFVVAFFARDLSQHFFNSDWTFAYWVGAQG
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
APIVYVLITVLYAWRTNRAADAAAQHDEAAQRDPSESSHLPPSI
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA