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The map label for this gene is 187927454

Identifier: 187927454

GI number: 187927454

Start: 375568

End: 376533

Strand: Direct

Name: 187927454

Synonym: Rpic_0351

Alternate gene names: NA

Gene position: 375568-376533 (Clockwise)

Preceding gene: 187927453

Following gene: 187927455

Centisome position: 9.53

GC content: 61.8

Gene sequence:

>966_bases
ATGGGCAACACTATCGGCGACACAATCGTATTGACCGACGCGGCATGCGATATGCCACGCTCGATGATCGATCAACTGGG
GTTGGGCGTGGTGCCGTTCCGCATTCGTGCGGGCGAATTGTTTGTAGAAGACCGCCGCGACGAGGCGGCGCTGCCGCAGC
TTTATCGCAAATACCTCGTCGACAAGCAGGATCACTATGCCGAATCGATTCCGCTGCTCGAACGCGAGATTGAAGACTTC
CTGCTCAAGCACGTGGTCACGCAGCACGACCGTGCCTTGCTGCTGACGATTGCCAGCTCGCGCAGTCATTTCTACAGCCA
CGCAACCGGCGCGGTGGTGGGCACCACGGCCAAGAGCTTCAAGCCACGCAAGGATGCGGGCCGCTCAGGGCTGTTCGAGT
TGACGGTGGTCGATACCGGCGCCATTGGCCCGGGCCAAGCGCTGATGGTGCATGAAGCAGCACGCATGTTGCGGGAAGGC
GCAGAGGTGCGTGACGTGGTGCACGTGATCGAGAATCGCCTGCGCGATGCCTCACACGTCTATCTCGTGCCCGATGAGTT
GCTGTACATGTACACGCGCGCCAAGCAGAAGGGCGAGAAGAGCATCACCTGGGGGCGCTACATGATGGGCACGGCCTTCA
ACGTGCGGCCGCTCATTCATATGCACCGCGGCGACACCGAAGCCATCGCCAAGGTGCGCGGCTCCGACGAGGGAATTCGC
CGCCTGCTCGCGCACACCGAAACCATGATTACCGAGGAGCGTCTGGCCACGCCGGTGGTGGCGATCACGTATTCCGGTTC
GCTCGATACCGTGCGCCGCATGGAGCCGGTGCAAGCGTTGATGCGAACCGCACAGGAGCACGGCGTGGAAGTGCTGCTCG
CGCCGATGAGCCTGACCGTGGCGTTGAACGTGGGGGCCAACGCGTTCTCCGTCGGTTATCTATCTGATTCGCCTGTGCCG
ATTTAG

Upstream 100 bases:

>100_bases
CGGCACCTAGCCGGCATCGCGACAGAAGCGGAACCATGATTCCGCAACAGAGGAGACACACCACCGGGCCACCGGCGGTG
CACCAAGAGGAGGGCGTGCG

Downstream 100 bases:

>100_bases
CCGCGCAGGCTTCACCTGGAGTTTTCATGTCGATTCGTACCGAGACCGCAGACGGCGTCCTGACGCTGACCTTTGATCGT
CTGGACCGCAAGAACGCCAT

Product: DegV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MGNTIGDTIVLTDAACDMPRSMIDQLGLGVVPFRIRAGELFVEDRRDEAALPQLYRKYLVDKQDHYAESIPLLEREIEDF
LLKHVVTQHDRALLLTIASSRSHFYSHATGAVVGTTAKSFKPRKDAGRSGLFELTVVDTGAIGPGQALMVHEAARMLREG
AEVRDVVHVIENRLRDASHVYLVPDELLYMYTRAKQKGEKSITWGRYMMGTAFNVRPLIHMHRGDTEAIAKVRGSDEGIR
RLLAHTETMITEERLATPVVAITYSGSLDTVRRMEPVQALMRTAQEHGVEVLLAPMSLTVALNVGANAFSVGYLSDSPVP
I

Sequences:

>Translated_321_residues
MGNTIGDTIVLTDAACDMPRSMIDQLGLGVVPFRIRAGELFVEDRRDEAALPQLYRKYLVDKQDHYAESIPLLEREIEDF
LLKHVVTQHDRALLLTIASSRSHFYSHATGAVVGTTAKSFKPRKDAGRSGLFELTVVDTGAIGPGQALMVHEAARMLREG
AEVRDVVHVIENRLRDASHVYLVPDELLYMYTRAKQKGEKSITWGRYMMGTAFNVRPLIHMHRGDTEAIAKVRGSDEGIR
RLLAHTETMITEERLATPVVAITYSGSLDTVRRMEPVQALMRTAQEHGVEVLLAPMSLTVALNVGANAFSVGYLSDSPVP
I
>Mature_320_residues
GNTIGDTIVLTDAACDMPRSMIDQLGLGVVPFRIRAGELFVEDRRDEAALPQLYRKYLVDKQDHYAESIPLLEREIEDFL
LKHVVTQHDRALLLTIASSRSHFYSHATGAVVGTTAKSFKPRKDAGRSGLFELTVVDTGAIGPGQALMVHEAARMLREGA
EVRDVVHVIENRLRDASHVYLVPDELLYMYTRAKQKGEKSITWGRYMMGTAFNVRPLIHMHRGDTEAIAKVRGSDEGIRR
LLAHTETMITEERLATPVVAITYSGSLDTVRRMEPVQALMRTAQEHGVEVLLAPMSLTVALNVGANAFSVGYLSDSPVPI

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003797 [H]

Pfam domain/function: PF02645 DegV [H]

EC number: NA

Molecular weight: Translated: 35591; Mature: 35460

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNTIGDTIVLTDAACDMPRSMIDQLGLGVVPFRIRAGELFVEDRRDEAALPQLYRKYLV
CCCCCCCEEEEECCHHCCCHHHHHHCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHC
DKQDHYAESIPLLEREIEDFLLKHVVTQHDRALLLTIASSRSHFYSHATGAVVGTTAKSF
CCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCEEECCHHHC
KPRKDAGRSGLFELTVVDTGAIGPGQALMVHEAARMLREGAEVRDVVHVIENRLRDASHV
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE
YLVPDELLYMYTRAKQKGEKSITWGRYMMGTAFNVRPLIHMHRGDTEAIAKVRGSDEGIR
EECHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHHHHHHCCCHHHHH
RLLAHTETMITEERLATPVVAITYSGSLDTVRRMEPVQALMRTAQEHGVEVLLAPMSLTV
HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEE
ALNVGANAFSVGYLSDSPVPI
EEECCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
GNTIGDTIVLTDAACDMPRSMIDQLGLGVVPFRIRAGELFVEDRRDEAALPQLYRKYLV
CCCCCCEEEEECCHHCCCHHHHHHCCCCEEEEEEECCEEEEECCCCCHHHHHHHHHHHC
DKQDHYAESIPLLEREIEDFLLKHVVTQHDRALLLTIASSRSHFYSHATGAVVGTTAKSF
CCCHHHHHHCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHCCCCCEEECCHHHC
KPRKDAGRSGLFELTVVDTGAIGPGQALMVHEAARMLREGAEVRDVVHVIENRLRDASHV
CCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEE
YLVPDELLYMYTRAKQKGEKSITWGRYMMGTAFNVRPLIHMHRGDTEAIAKVRGSDEGIR
EECHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEEECCCCHHHHHHHCCCHHHHH
RLLAHTETMITEERLATPVVAITYSGSLDTVRRMEPVQALMRTAQEHGVEVLLAPMSLTV
HHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEECEEEEE
ALNVGANAFSVGYLSDSPVPI
EEECCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]