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The map label for this gene is cc4 [H]

Identifier: 187927393

GI number: 187927393

Start: 308139

End: 308462

Strand: Direct

Name: cc4 [H]

Synonym: Rpic_0288

Alternate gene names: 187927393

Gene position: 308139-308462 (Clockwise)

Preceding gene: 187927392

Following gene: 187927394

Centisome position: 7.82

GC content: 62.35

Gene sequence:

>324_bases
ATGCGGCGGAGTAAGGGGCTGCTCGGTCTTGGCGCAGCGCTGATGCTGGCAGCAGCCCCGGCGATTGCGGCGGGCAGCGG
TGCGCCTGCCAAGGCCACACAATGCTTCGCCTGTCACGGCGCGGATGGTTTGTCGAAGGCACCCGACGCACCTAATCTCG
CTGGCCAGAACGAGCAGTATCTTGTCAAGGCACTGCAGGACTTTCGCTCCGGCGCGCGGGCGCACGAAGTGATGTCAATG
ATGGCCAAGGGATTGTCCGACCAGGACATTCAGGCGGTCTCTGCATACTTCAGTGCAATCGCGATCAGCGTGAAAGCACC
GTAG

Upstream 100 bases:

>100_bases
AATAACGAGTACCTTGGGCGACCGGTAGACGTGGCGACGCTGCCCGACGGCTCACTGCTGATCTCCGACGACTACGCCGG
TGCAATCTACAGGGTGTCGT

Downstream 100 bases:

>100_bases
TCTTGCCGGCGGGCGCCAAGCTTCGGCGCGGCGTCCGCTGGCCAGGTTTCTCAAGCGGGCATTGCGCGCGGCGCTTTGCC
CGGTTTCGTCATGACGCTCA

Product: cytochrome c class I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRRSKGLLGLGAALMLAAAPAIAAGSGAPAKATQCFACHGADGLSKAPDAPNLAGQNEQYLVKALQDFRSGARAHEVMSM
MAKGLSDQDIQAVSAYFSAIAISVKAP

Sequences:

>Translated_107_residues
MRRSKGLLGLGAALMLAAAPAIAAGSGAPAKATQCFACHGADGLSKAPDAPNLAGQNEQYLVKALQDFRSGARAHEVMSM
MAKGLSDQDIQAVSAYFSAIAISVKAP
>Mature_107_residues
MRRSKGLLGLGAALMLAAAPAIAAGSGAPAKATQCFACHGADGLSKAPDAPNLAGQNEQYLVKALQDFRSGARAHEVMSM
MAKGLSDQDIQAVSAYFSAIAISVKAP

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10846; Mature: 10846

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRSKGLLGLGAALMLAAAPAIAAGSGAPAKATQCFACHGADGLSKAPDAPNLAGQNEQY
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHH
LVKALQDFRSGARAHEVMSMMAKGLSDQDIQAVSAYFSAIAISVKAP
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MRRSKGLLGLGAALMLAAAPAIAAGSGAPAKATQCFACHGADGLSKAPDAPNLAGQNEQY
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEECCCCCCCCCCCCCCCCCCCHHH
LVKALQDFRSGARAHEVMSMMAKGLSDQDIQAVSAYFSAIAISVKAP
HHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]