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The map label for this gene is 187927392

Identifier: 187927392

GI number: 187927392

Start: 306893

End: 308152

Strand: Direct

Name: 187927392

Synonym: Rpic_0287

Alternate gene names: NA

Gene position: 306893-308152 (Clockwise)

Preceding gene: 187927391

Following gene: 187927393

Centisome position: 7.78

GC content: 60.48

Gene sequence:

>1260_bases
ATGACAAGCAAGCTTGCAGCCAGACTCGCGTTGCTTTGCGCGGCAGTATCCTGCAGCGTTGCCGCACAGGCCCAGGACAA
CATGCAGAAACTGGAGGGGTTCAAGAGCACAGGGGCATCGTTGAACATCGAGACGGTGCCGCAGGGCGGGGCACGCGCAG
CGGCGCTCAAGGCCAATCTCAAGCAGGTCAAGCTGCCGCCTGGCTTCAAGATCGATCTGTATGCGATCGTGCCGGACGCG
CGTCACATGGCAGTTGGCCCCAATACGGGCGTGGTTTTCGTCGGTACGCGCAAGACTCGCGTGTGGGCCGTCTCCGACCG
CACCAAGAGCCGTGTCGCCGATGAGGTGAAGGTGTTCGCACCGTCTGTCAGTTTCAAGATTCCGAATGGCTTGTGCTTTT
CGCCGGACGGTGTGCTTTATGTCGCCGAACAGAATCGCGTACTGGCATTCCCGGCAGCCGATTTTTTCTATGAGAGTCCT
GATGTTGCCACGGCACCTGTCGTGCCCCAGGGGGAACTGATCCCGGTTGAAGAAGAGAGCTTCAACCACACCGCCCGGAC
CTGTCGGATCGGCCCGGACGACAAGCTCTACATCACACTGGGTAACCCGTTCAATGTGCCCCCCAAGGAAAAGGTTGCCC
TGTATGACAAGGTCGGGATGATGGGCATTATCCGGATGGACCGCGACGGCAAGCACCGCGAGGTATTCGCCCGTGGCGTG
CGCAATTCGGTCGGGATGGACTTCAACCCCAAGGACAAGACCTTGTGGTTCACCGACAACCAGGTCGACGGAATGGGTGA
CGATATTCCGCCGGGCGAGCTCAACCGCGCCACGAAGGCTGGTGAGAACTTCGGTTTCCCCTGGTACGGCGGTGGGCATA
TCCGCACCGTCGAATACAAGAGCGAAACGCCGCCGTCCGGTGTGGTTTTCCCGCAGGTTGAAATGGCGGCACACGCTGCG
GACCTGGGCATGACGTTCTATAAGGGCAAGATGTTCCCGGCCAAGTATCAAGGCGGCGTGTTCAGCGCTCAACACGGCTC
GTGGAACCGCACAACGCCGGTCGGCGCGCGCATCATGTACACGCCGGTCAAGGCCGACGGAACCGCTGGCAAGACCGAAG
TCTTCGCTGAAGGGTGGTTGACGTCGAATAACGAGTACCTTGGGCGACCGGTAGACGTGGCGACGCTGCCCGACGGCTCA
CTGCTGATCTCCGACGACTACGCCGGTGCAATCTACAGGGTGTCGTATGCGGCGGAGTAA

Upstream 100 bases:

>100_bases
TTTTCTTCTAGACCTTCCCAATTACCGCAGAAGTACAAGCGCAGCCGCTCGGCGGACTGTGTGGGGATGTCTTTTTCCAA
AAATCCATGAGGAGACAAAC

Downstream 100 bases:

>100_bases
GGGGCTGCTCGGTCTTGGCGCAGCGCTGATGCTGGCAGCAGCCCCGGCGATTGCGGCGGGCAGCGGTGCGCCTGCCAAGG
CCACACAATGCTTCGCCTGT

Product: putative glucose/sorbosone dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTSKLAARLALLCAAVSCSVAAQAQDNMQKLEGFKSTGASLNIETVPQGGARAAALKANLKQVKLPPGFKIDLYAIVPDA
RHMAVGPNTGVVFVGTRKTRVWAVSDRTKSRVADEVKVFAPSVSFKIPNGLCFSPDGVLYVAEQNRVLAFPAADFFYESP
DVATAPVVPQGELIPVEEESFNHTARTCRIGPDDKLYITLGNPFNVPPKEKVALYDKVGMMGIIRMDRDGKHREVFARGV
RNSVGMDFNPKDKTLWFTDNQVDGMGDDIPPGELNRATKAGENFGFPWYGGGHIRTVEYKSETPPSGVVFPQVEMAAHAA
DLGMTFYKGKMFPAKYQGGVFSAQHGSWNRTTPVGARIMYTPVKADGTAGKTEVFAEGWLTSNNEYLGRPVDVATLPDGS
LLISDDYAGAIYRVSYAAE

Sequences:

>Translated_419_residues
MTSKLAARLALLCAAVSCSVAAQAQDNMQKLEGFKSTGASLNIETVPQGGARAAALKANLKQVKLPPGFKIDLYAIVPDA
RHMAVGPNTGVVFVGTRKTRVWAVSDRTKSRVADEVKVFAPSVSFKIPNGLCFSPDGVLYVAEQNRVLAFPAADFFYESP
DVATAPVVPQGELIPVEEESFNHTARTCRIGPDDKLYITLGNPFNVPPKEKVALYDKVGMMGIIRMDRDGKHREVFARGV
RNSVGMDFNPKDKTLWFTDNQVDGMGDDIPPGELNRATKAGENFGFPWYGGGHIRTVEYKSETPPSGVVFPQVEMAAHAA
DLGMTFYKGKMFPAKYQGGVFSAQHGSWNRTTPVGARIMYTPVKADGTAGKTEVFAEGWLTSNNEYLGRPVDVATLPDGS
LLISDDYAGAIYRVSYAAE
>Mature_418_residues
TSKLAARLALLCAAVSCSVAAQAQDNMQKLEGFKSTGASLNIETVPQGGARAAALKANLKQVKLPPGFKIDLYAIVPDAR
HMAVGPNTGVVFVGTRKTRVWAVSDRTKSRVADEVKVFAPSVSFKIPNGLCFSPDGVLYVAEQNRVLAFPAADFFYESPD
VATAPVVPQGELIPVEEESFNHTARTCRIGPDDKLYITLGNPFNVPPKEKVALYDKVGMMGIIRMDRDGKHREVFARGVR
NSVGMDFNPKDKTLWFTDNQVDGMGDDIPPGELNRATKAGENFGFPWYGGGHIRTVEYKSETPPSGVVFPQVEMAAHAAD
LGMTFYKGKMFPAKYQGGVFSAQHGSWNRTTPVGARIMYTPVKADGTAGKTEVFAEGWLTSNNEYLGRPVDVATLPDGSL
LISDDYAGAIYRVSYAAE

Specific function: Unknown

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.liquefaciens L-sorbosone dehydrogenase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 45372; Mature: 45241

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSKLAARLALLCAAVSCSVAAQAQDNMQKLEGFKSTGASLNIETVPQGGARAAALKANL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC
KQVKLPPGFKIDLYAIVPDARHMAVGPNTGVVFVGTRKTRVWAVSDRTKSRVADEVKVFA
EEEECCCCCEEEEEEECCCCCEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHEEEEE
PSVSFKIPNGLCFSPDGVLYVAEQNRVLAFPAADFFYESPDVATAPVVPQGELIPVEEES
CEEEEECCCCEEECCCCEEEEEECCEEEEEECHHHEECCCCCCCCCCCCCCCEEECCCCC
FNHTARTCRIGPDDKLYITLGNPFNVPPKEKVALYDKVGMMGIIRMDRDGKHREVFARGV
CCCCEEEEEECCCCEEEEEECCCCCCCCCHHEEEEECCCCEEEEEECCCCCHHHHHHHHH
RNSVGMDFNPKDKTLWFTDNQVDGMGDDIPPGELNRATKAGENFGFPWYGGGHIRTVEYK
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEC
SETPPSGVVFPQVEMAAHAADLGMTFYKGKMFPAKYQGGVFSAQHGSWNRTTPVGARIMY
CCCCCCCEEECCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEE
TPVKADGTAGKTEVFAEGWLTSNNEYLGRPVDVATLPDGSLLISDDYAGAIYRVSYAAE
EEECCCCCCCCCEEEEECEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure 
TSKLAARLALLCAAVSCSVAAQAQDNMQKLEGFKSTGASLNIETVPQGGARAAALKANL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEECCC
KQVKLPPGFKIDLYAIVPDARHMAVGPNTGVVFVGTRKTRVWAVSDRTKSRVADEVKVFA
EEEECCCCCEEEEEEECCCCCEEEECCCCCEEEEECCCEEEEEECCCHHHHHHHHEEEEE
PSVSFKIPNGLCFSPDGVLYVAEQNRVLAFPAADFFYESPDVATAPVVPQGELIPVEEES
CEEEEECCCCEEECCCCEEEEEECCEEEEEECHHHEECCCCCCCCCCCCCCCEEECCCCC
FNHTARTCRIGPDDKLYITLGNPFNVPPKEKVALYDKVGMMGIIRMDRDGKHREVFARGV
CCCCEEEEEECCCCEEEEEECCCCCCCCCHHEEEEECCCCEEEEEECCCCCHHHHHHHHH
RNSVGMDFNPKDKTLWFTDNQVDGMGDDIPPGELNRATKAGENFGFPWYGGGHIRTVEYK
HHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEC
SETPPSGVVFPQVEMAAHAADLGMTFYKGKMFPAKYQGGVFSAQHGSWNRTTPVGARIMY
CCCCCCCEEECCHHHHHHHHHCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCEEEE
TPVKADGTAGKTEVFAEGWLTSNNEYLGRPVDVATLPDGSLLISDDYAGAIYRVSYAAE
EEECCCCCCCCCEEEEECEEECCCCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]