Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927387
Identifier: 187927387
GI number: 187927387
Start: 297160
End: 297495
Strand: Reverse
Name: 187927387
Synonym: Rpic_0281
Alternate gene names: NA
Gene position: 297495-297160 (Counterclockwise)
Preceding gene: 187927390
Following gene: 187927382
Centisome position: 7.55
GC content: 58.93
Gene sequence:
>336_bases ATGCCAAAGCGTTTGCACGTGCGCCCATTCACGGTTTTATTGATGGGGCTAGCATTATTAGGCGGCAGCGCATCGGCGCA GGTGGTTGCGCCGACGAGCGCCAATACGAAGTCGGCTGTGCCCGCCCAAGACTCTCCTGCAAACCCCTCTATTGAGGACG CGCCTCTCACGGCCCTGCCTACCCACGTCAAAAGTGGTGCTCCCCCAGTCCATGGAGGCTTCGAGGTCGAGCGATGCAGA GAGGTCAACGCAACCACGGGAAAATGTGTGGATGCGATGTGCGTCGGTTACACAGACCAAGGAGTCCGGAGCGAGCACTT TGAATGCGTGCCTTGA
Upstream 100 bases:
>100_bases AAGAATTGTTAAATATAGTGCGCAAGGCGAGAGAGAATGATTATGTTTTGTGCTCTCGCAGCATGTTTTATGCTAGGGCA GTTATTGATGGGAGGCCGGT
Downstream 100 bases:
>100_bases CGTTTCATAGGTCGCAGAAGGGACCTTGAACCTGATTTTAGGGCCCAGCCTACCCGTTCCGGTTCTTGGCACGTGTCCGG GGCGGATGCGTGCATATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPKRLHVRPFTVLLMGLALLGGSASAQVVAPTSANTKSAVPAQDSPANPSIEDAPLTALPTHVKSGAPPVHGGFEVERCR EVNATTGKCVDAMCVGYTDQGVRSEHFECVP
Sequences:
>Translated_111_residues MPKRLHVRPFTVLLMGLALLGGSASAQVVAPTSANTKSAVPAQDSPANPSIEDAPLTALPTHVKSGAPPVHGGFEVERCR EVNATTGKCVDAMCVGYTDQGVRSEHFECVP >Mature_110_residues PKRLHVRPFTVLLMGLALLGGSASAQVVAPTSANTKSAVPAQDSPANPSIEDAPLTALPTHVKSGAPPVHGGFEVERCRE VNATTGKCVDAMCVGYTDQGVRSEHFECVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11551; Mature: 11420
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRLHVRPFTVLLMGLALLGGSASAQVVAPTSANTKSAVPAQDSPANPSIEDAPLTALP CCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC THVKSGAPPVHGGFEVERCREVNATTGKCVDAMCVGYTDQGVRSEHFECVP CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PKRLHVRPFTVLLMGLALLGGSASAQVVAPTSANTKSAVPAQDSPANPSIEDAPLTALP CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC THVKSGAPPVHGGFEVERCREVNATTGKCVDAMCVGYTDQGVRSEHFECVP CCCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA