Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927362
Identifier: 187927362
GI number: 187927362
Start: 269969
End: 271915
Strand: Direct
Name: 187927362
Synonym: Rpic_0255
Alternate gene names: NA
Gene position: 269969-271915 (Clockwise)
Preceding gene: 187927361
Following gene: 187927363
Centisome position: 6.85
GC content: 62.46
Gene sequence:
>1947_bases ATGATGAACAACACACTGAGCACACAGTTCGAGCAGTACAGCGCCTGGCGCGCTTCGGTACTGCAATCGGTGGGGGAATT CCAGGACTGGCTGCAAGCCCAGGAGCTGTACGACGCGCAAGCTGACATGCGCGCGCAGCGAATCCGCGGCGTCCTGCGCA GCGACAAGCTCAAGGTCGCCTTCATTGCCGAGTTCTCGCGCGGCAAGAGTGAACTGATCAACGCGATCTTCTTTGCGGAT TTCGGCCGCCGCATCCTGCCATCGTCGGCGGGCCGGACCACGATGTGTCCGACTGAGCTGATGTACGACGAAAGCTATCC GCCGTCGATCCGCCTGCTGCCGATCGAGACGCGTCTGCACGACGCATCGACGGCCGATTTTCGCGATGCGGGCAGCCACT GGCTGTCGGTCCCTCTCGACCCGTCGTCGCCCGAGGGCATGCTCGAAGCGTTCCGCCACGTGGTGGAAACCGTGCGCGTG CCCAAGGAAGAAGCCGAACAACTGGGGCTCTATAACGACGCCGATCCCGACGCCGCGTTCTCGGTGGATGCCGCCGGCAC GGTCGAAGTGTCGAAGTGGCGTCACGCGATCATCAATTTCCCGCACCCGATGCTCAAGCAGGGGCTGGTGATCCTGGATA CGCCGGGCTTGAACGCCATCGGTACCGAGCCGGAACTGACACTGCGGCTGATTCCAGATGCACATGTCGTGGTGTTCGTG CTGGCAGCGGACGCCGGCGTGACCAAGAGCGACCTGGAGCTGTGGCGCTCGCACGTCGGTGGTGGCCAACGCAAGGGCTG CATCGCGGTGCTCAACAAGGTCGATGGCCTGTGGGATCCGCTCAAGTCCGAAGAGGAAGTCGAGAACGAAGTCAGTCGTC AGATCATGACGACGGCGCAGGTGCTCGATATCGATGTCGAGCGCGTGTATCCGGTGTCGGCGCAGAAGGGCCTGGTGGCC AAGGTCAGCCATGACCATGAGCTGCTGGCCAAGAGCCGGCTGCTGGAGCTGGAGTCGGTGCTGTCGGATCAGCTGATTCC GCAGCGTCGCGAGATCGTCACCGAGCAAGTGCAACTGGCGGTGAAGGATATGGCCACCGGTGCGCAGCAACTGCTGCAGA TGCGCCGCCGCGATATCGTCGAGCAGTTGTTCGAGCTGCGCGGCCTGCGCGGCAAGAACCACACGATGGTCAAGCACATG CTGATGCGCGTGCAGGGCGAGAAGGAAGAGTTCGAGCAGAGCATCGCCAAGTTCCAAGCGCTGCGCACGGTGTTCGGCCG CCACAGCGCAGAGATCATCAAGAGCGTACAGCTCAAGCAGATCCGCTCGACCATGCGCGAGGCGCGCGAGAAGATGAAGG AGCGCGTGTTCTCGCGCGGCCTGCGTGACGACATGGACAAGTTGTTCGGCCACCTGACCGGCCTGGTGCGCGATGCAGCG AATCGCATTGACCAACTGCACCAGATGGTTGATGGCATGTACAAGAAGTTCAACGCCGAGCACGGCTTCACGCTGTCGCC GCCGCTGCGCTTTTTGGGCACGCGCTACGACGCTGATCTGAAAGAAACGCTGATGCTGGCGCACAACCACTTTGGCGCGT TTAGCTTCCTGACCCGCCCGAAGCCGCAACTCGTGCACGGCGCGTTCTCGACGGTGGCCAGCCGCGTGCTGGATACCTTC CAGGACATGAACCGCGACATCGAGATCTGGCTGAAGTCGGTCATGACACCGCTCGAAGCGCAGGTGCGCGATCACCAGAA ACAACTGCGTAAGCGTGTCGATTCGATCGAGCGCATTCACGAGGCCACCGATACGCTCGAAGCGCGCATCACCGAACTGG AAGCGCTGCTCAATACGCTGGACGAACGCAGCGGCACGATCGCGCAGTACACCGATCGCATTCTCGCGGCCGGGACGATC CTGGAGCGGCAGTCGTTCGCGGCCTGA
Upstream 100 bases:
>100_bases CCTAAATTTGTGCATTTCTGTGCCGTAATTGGGCGGTAACAGCGATGTCGAGGGGCGCGCGCATTTTTTCGCGGTCGGGT CGCGCACACAATAAGACAGA
Downstream 100 bases:
>100_bases CGCGCATCGTTCGTTACGGAGAAGGCGCCTGCGGGCGCTTTTTTCGTTCTGGTAGGATCGCCGCCAGCGCGCACGTTCCG TCCGCCGCTTTTCCATCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 648; Mature: 648
Protein sequence:
>648_residues MMNNTLSTQFEQYSAWRASVLQSVGEFQDWLQAQELYDAQADMRAQRIRGVLRSDKLKVAFIAEFSRGKSELINAIFFAD FGRRILPSSAGRTTMCPTELMYDESYPPSIRLLPIETRLHDASTADFRDAGSHWLSVPLDPSSPEGMLEAFRHVVETVRV PKEEAEQLGLYNDADPDAAFSVDAAGTVEVSKWRHAIINFPHPMLKQGLVILDTPGLNAIGTEPELTLRLIPDAHVVVFV LAADAGVTKSDLELWRSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQVLDIDVERVYPVSAQKGLVA KVSHDHELLAKSRLLELESVLSDQLIPQRREIVTEQVQLAVKDMATGAQQLLQMRRRDIVEQLFELRGLRGKNHTMVKHM LMRVQGEKEEFEQSIAKFQALRTVFGRHSAEIIKSVQLKQIRSTMREAREKMKERVFSRGLRDDMDKLFGHLTGLVRDAA NRIDQLHQMVDGMYKKFNAEHGFTLSPPLRFLGTRYDADLKETLMLAHNHFGAFSFLTRPKPQLVHGAFSTVASRVLDTF QDMNRDIEIWLKSVMTPLEAQVRDHQKQLRKRVDSIERIHEATDTLEARITELEALLNTLDERSGTIAQYTDRILAAGTI LERQSFAA
Sequences:
>Translated_648_residues MMNNTLSTQFEQYSAWRASVLQSVGEFQDWLQAQELYDAQADMRAQRIRGVLRSDKLKVAFIAEFSRGKSELINAIFFAD FGRRILPSSAGRTTMCPTELMYDESYPPSIRLLPIETRLHDASTADFRDAGSHWLSVPLDPSSPEGMLEAFRHVVETVRV PKEEAEQLGLYNDADPDAAFSVDAAGTVEVSKWRHAIINFPHPMLKQGLVILDTPGLNAIGTEPELTLRLIPDAHVVVFV LAADAGVTKSDLELWRSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQVLDIDVERVYPVSAQKGLVA KVSHDHELLAKSRLLELESVLSDQLIPQRREIVTEQVQLAVKDMATGAQQLLQMRRRDIVEQLFELRGLRGKNHTMVKHM LMRVQGEKEEFEQSIAKFQALRTVFGRHSAEIIKSVQLKQIRSTMREAREKMKERVFSRGLRDDMDKLFGHLTGLVRDAA NRIDQLHQMVDGMYKKFNAEHGFTLSPPLRFLGTRYDADLKETLMLAHNHFGAFSFLTRPKPQLVHGAFSTVASRVLDTF QDMNRDIEIWLKSVMTPLEAQVRDHQKQLRKRVDSIERIHEATDTLEARITELEALLNTLDERSGTIAQYTDRILAAGTI LERQSFAA >Mature_648_residues MMNNTLSTQFEQYSAWRASVLQSVGEFQDWLQAQELYDAQADMRAQRIRGVLRSDKLKVAFIAEFSRGKSELINAIFFAD FGRRILPSSAGRTTMCPTELMYDESYPPSIRLLPIETRLHDASTADFRDAGSHWLSVPLDPSSPEGMLEAFRHVVETVRV PKEEAEQLGLYNDADPDAAFSVDAAGTVEVSKWRHAIINFPHPMLKQGLVILDTPGLNAIGTEPELTLRLIPDAHVVVFV LAADAGVTKSDLELWRSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQVLDIDVERVYPVSAQKGLVA KVSHDHELLAKSRLLELESVLSDQLIPQRREIVTEQVQLAVKDMATGAQQLLQMRRRDIVEQLFELRGLRGKNHTMVKHM LMRVQGEKEEFEQSIAKFQALRTVFGRHSAEIIKSVQLKQIRSTMREAREKMKERVFSRGLRDDMDKLFGHLTGLVRDAA NRIDQLHQMVDGMYKKFNAEHGFTLSPPLRFLGTRYDADLKETLMLAHNHFGAFSFLTRPKPQLVHGAFSTVASRVLDTF QDMNRDIEIWLKSVMTPLEAQVRDHQKQLRKRVDSIERIHEATDTLEARITELEALLNTLDERSGTIAQYTDRILAAGTI LERQSFAA
Specific function: Unknown
COG id: COG0699
COG function: function code R; Predicted GTPases (dynamin-related)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73426; Mature: 73426
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNNTLSTQFEQYSAWRASVLQSVGEFQDWLQAQELYDAQADMRAQRIRGVLRSDKLKVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FIAEFSRGKSELINAIFFADFGRRILPSSAGRTTMCPTELMYDESYPPSIRLLPIETRLH EHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEHHHHC DASTADFRDAGSHWLSVPLDPSSPEGMLEAFRHVVETVRVPKEEAEQLGLYNDADPDAAF CCCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCE SVDAAGTVEVSKWRHAIINFPHPMLKQGLVILDTPGLNAIGTEPELTLRLIPDAHVVVFV ECCCCCCEEHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LAADAGVTKSDLELWRSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQ EECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLDIDVERVYPVSAQKGLVAKVSHDHELLAKSRLLELESVLSDQLIPQRREIVTEQVQLA HHHCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VKDMATGAQQLLQMRRRDIVEQLFELRGLRGKNHTMVKHMLMRVQGEKEEFEQSIAKFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LRTVFGRHSAEIIKSVQLKQIRSTMREAREKMKERVFSRGLRDDMDKLFGHLTGLVRDAA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NRIDQLHQMVDGMYKKFNAEHGFTLSPPLRFLGTRYDADLKETLMLAHNHFGAFSFLTRP HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCC KPQLVHGAFSTVASRVLDTFQDMNRDIEIWLKSVMTPLEAQVRDHQKQLRKRVDSIERIH CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH EATDTLEARITELEALLNTLDERSGTIAQYTDRILAAGTILERQSFAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMNNTLSTQFEQYSAWRASVLQSVGEFQDWLQAQELYDAQADMRAQRIRGVLRSDKLKVA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE FIAEFSRGKSELINAIFFADFGRRILPSSAGRTTMCPTELMYDESYPPSIRLLPIETRLH EHHHHHCCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCHHHHCCCCCCCCEEEEEEHHHHC DASTADFRDAGSHWLSVPLDPSSPEGMLEAFRHVVETVRVPKEEAEQLGLYNDADPDAAF CCCCCCHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCE SVDAAGTVEVSKWRHAIINFPHPMLKQGLVILDTPGLNAIGTEPELTLRLIPDAHVVVFV ECCCCCCEEHHHHHHHHHCCCCHHHHCCEEEEECCCCCCCCCCCCEEEEECCCCCEEEEE LAADAGVTKSDLELWRSHVGGGQRKGCIAVLNKVDGLWDPLKSEEEVENEVSRQIMTTAQ EECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH VLDIDVERVYPVSAQKGLVAKVSHDHELLAKSRLLELESVLSDQLIPQRREIVTEQVQLA HHHCCHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VKDMATGAQQLLQMRRRDIVEQLFELRGLRGKNHTMVKHMLMRVQGEKEEFEQSIAKFQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH LRTVFGRHSAEIIKSVQLKQIRSTMREAREKMKERVFSRGLRDDMDKLFGHLTGLVRDAA HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH NRIDQLHQMVDGMYKKFNAEHGFTLSPPLRFLGTRYDADLKETLMLAHNHFGAFSFLTRP HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHHCCC KPQLVHGAFSTVASRVLDTFQDMNRDIEIWLKSVMTPLEAQVRDHQKQLRKRVDSIERIH CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH EATDTLEARITELEALLNTLDERSGTIAQYTDRILAAGTILERQSFAA HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA