Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927305
Identifier: 187927305
GI number: 187927305
Start: 215532
End: 216347
Strand: Direct
Name: 187927305
Synonym: Rpic_0197
Alternate gene names: NA
Gene position: 215532-216347 (Clockwise)
Preceding gene: 187927301
Following gene: 187927306
Centisome position: 5.47
GC content: 61.4
Gene sequence:
>816_bases ATGAAGAAGTTTGCGTACGCAGCCAGTCTGGTACTGCTGACCGGTGCCGTTGCCGGTGTCAGCCAAACCGCCATCGCGCA GTCCGCACCCGCGGCTGATGCACCGGCCGCCGCACCGGCGCCCGCGCCGGCCGCACTCACGGCCAACGTCACGCTGGCCA GCCAATACCGCTACCGCGGCATCATGCAGACCAACAACAAGCCGGCCATTCAGGGCGGCTTTGACTACGCCATTCCTGGC GGTGTGTTGCCCGAGGGTTTCTACATCGGTAACTGGAACTCGTCGATCAGCTGGTTGAGCGATTCCAACTCGAACGTTTC CGCACCGATCGAGATGGACTTCTACGGCGGCTACAAGACCGAGATCGTCAAGGACGTGCCCATCGACGTGGGCGTGCTCC AGTACTACTACCCGGGCAGCTATCCCGACGGTTTCACGCGTCCGCACACGACCGAAGGCTATGCGCAGATCGGCTACGGC CCGGTCACGTTCAAGTATTCGCACGCGTTTTCGAACCTGTTCGGCACGCCCGATTCGCATCACAGCCAGTACTTCGATCT GTCGGGCAACTTCGATACCGGCTTTTGGGGCCTGACGCTGAACCTGCATGCGGGCTACCAACAAGTGCCCCATCAGACCG TGCGCGCTTCGTATGCCGACTGGAAGGTCGGCGTGACGAAAGACTTCGGCAACGGCTGGGCGGCGTCGCTGGCCTACATC GATACGAACGCTTCGCGCGCGTTCTATACGAACACGCGCGGCAACTACATGGGCAAGGCCACGGCCCTGCTGTCGATCAC CAAGACTTTCCAATAA
Upstream 100 bases:
>100_bases GGCGCCCTCCAATCTGACGACATCGACATGGCATGACAGTTGCAGAACTGGTGCGATTTTTTTCAATTCCGTTGCGACTG TCTAAAGGGGGAGAGCCGTT
Downstream 100 bases:
>100_bases CGATGCGGGGCGGCGCCCCGGTGCCGCCGACCGAGGAGGAACCAGCATGAAACTCATCATGGCCATCATCAAGCCGTTCA AGCTCGACGAGGTCCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 271; Mature: 271
Protein sequence:
>271_residues MKKFAYAASLVLLTGAVAGVSQTAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRGIMQTNNKPAIQGGFDYAIPG GVLPEGFYIGNWNSSISWLSDSNSNVSAPIEMDFYGGYKTEIVKDVPIDVGVLQYYYPGSYPDGFTRPHTTEGYAQIGYG PVTFKYSHAFSNLFGTPDSHHSQYFDLSGNFDTGFWGLTLNLHAGYQQVPHQTVRASYADWKVGVTKDFGNGWAASLAYI DTNASRAFYTNTRGNYMGKATALLSITKTFQ
Sequences:
>Translated_271_residues MKKFAYAASLVLLTGAVAGVSQTAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRGIMQTNNKPAIQGGFDYAIPG GVLPEGFYIGNWNSSISWLSDSNSNVSAPIEMDFYGGYKTEIVKDVPIDVGVLQYYYPGSYPDGFTRPHTTEGYAQIGYG PVTFKYSHAFSNLFGTPDSHHSQYFDLSGNFDTGFWGLTLNLHAGYQQVPHQTVRASYADWKVGVTKDFGNGWAASLAYI DTNASRAFYTNTRGNYMGKATALLSITKTFQ >Mature_271_residues MKKFAYAASLVLLTGAVAGVSQTAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRGIMQTNNKPAIQGGFDYAIPG GVLPEGFYIGNWNSSISWLSDSNSNVSAPIEMDFYGGYKTEIVKDVPIDVGVLQYYYPGSYPDGFTRPHTTEGYAQIGYG PVTFKYSHAFSNLFGTPDSHHSQYFDLSGNFDTGFWGLTLNLHAGYQQVPHQTVRASYADWKVGVTKDFGNGWAASLAYI DTNASRAFYTNTRGNYMGKATALLSITKTFQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29177; Mature: 29177
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFAYAASLVLLTGAVAGVSQTAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRG CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECC IMQTNNKPAIQGGFDYAIPGGVLPEGFYIGNWNSSISWLSDSNSNVSAPIEMDFYGGYKT EEECCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCHH EIVKDVPIDVGVLQYYYPGSYPDGFTRPHTTEGYAQIGYGPVTFKYSHAFSNLFGTPDSH EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHCCCCCCC HSQYFDLSGNFDTGFWGLTLNLHAGYQQVPHQTVRASYADWKVGVTKDFGNGWAASLAYI CCEEEECCCCCCCCEEEEEEEEECCHHHCCCHHHHCCCCCEEEEEEEECCCCEEEEEEEE DTNASRAFYTNTRGNYMGKATALLSITKTFQ ECCCCEEEEECCCCCCCCHHEEEEEEEECCC >Mature Secondary Structure MKKFAYAASLVLLTGAVAGVSQTAIAQSAPAADAPAAAPAPAPAALTANVTLASQYRYRG CCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEECC IMQTNNKPAIQGGFDYAIPGGVLPEGFYIGNWNSSISWLSDSNSNVSAPIEMDFYGGYKT EEECCCCCCEECCCCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCCEEEEECCCCHH EIVKDVPIDVGVLQYYYPGSYPDGFTRPHTTEGYAQIGYGPVTFKYSHAFSNLFGTPDSH EEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEECCCEEEEEEHHHHHHHCCCCCCC HSQYFDLSGNFDTGFWGLTLNLHAGYQQVPHQTVRASYADWKVGVTKDFGNGWAASLAYI CCEEEECCCCCCCCEEEEEEEEECCHHHCCCHHHHCCCCCEEEEEEEECCCCEEEEEEEE DTNASRAFYTNTRGNYMGKATALLSITKTFQ ECCCCEEEEECCCCCCCCHHEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA