| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is birA/coaX [H]
Identifier: 187927275
GI number: 187927275
Start: 184507
End: 185388
Strand: Reverse
Name: birA/coaX [H]
Synonym: Rpic_0167
Alternate gene names: 187927275
Gene position: 185388-184507 (Counterclockwise)
Preceding gene: 187927281
Following gene: 187927274
Centisome position: 4.7
GC content: 70.86
Gene sequence:
>882_bases ATGTCTCTTGCCGAACCCTCCGCGGGGTGGCGCCTTGCGCGCGAGCGTATCCAGCCCAGCGGTCCGGCTGCCGGCTGGCC CGTCGATGTGGTCGAGGCCACCGGCTCCACCAACGCCGATCTGATGGCCGCCGTGCGCGATGCCACGTGGCCTGCCTACA CGGCGACGCCCGCCCATGCCGGCAACGCGCCGCTCGTGGGCGCGCGCGTGCTGGCCGCGCAACGCCAGACCGCAGGACGC GGCCGACAGGGCCGCCCGTGGGATGGCGACCACGGTTTGACCTTCTCCATCGCCTGCGCCTTTGCGGGTGAGCCCGCGCA GCTCGGCGGACTGAGCCTGGCCGTGGGCGTGGCCGTGGTTGAGGCCGTGGCTGGGTACGCGGAAGCCCGCGGCGGCAGCG GACAGGCCCTCAGCCTCAAGTGGCCCAACGATGTGCAGATCGCCGGGCGCAAGCTGGCCGGCATCCTGGTCGAGACCGTG CGGACAGCGCCGGGCCGGACCTGGACCGTCATCGGCATCGGCCTGAACCTGGAACGGCCGCACGTGCTGGAAACCACGCT CGGCCGGGGCCTGTCGGGCGTGGAAGAACTGGTGGATGCGCCGGAGGCGAACGCCGTGTTTTCGGCGCTGCTCACATCGC TGGGTGAGCACCTGCAGCGCTTCGGCTTACAGGGCCTGGCGCCGTTCGTTGCGCCGTTTGCGGCCCGCGATGCCTTTGCC GGGGAGCGCGTGCGTCTGTGGCAGGACGGTAGCGTGGTGCTCGAAGGCGTGGCGCATGGAATCGACGCACAAGGCCGTCT GGCGATTGAATCGGGCGGACGTGTGCAGTGGATTCACAGCGGCGAGGTCTCCTTGCGCAGCGCAGATGCGGAGCAGCCAT GA
Upstream 100 bases:
>100_bases GTGAGGCCTTTGCGTCGCTTGAAGCAAGCACCAGACCCGTGTTTGCGGCACCGCTCGTACAATGCGCGCATTCTTAGCGC GAACCTGATCACCCATCTTT
Downstream 100 bases:
>100_bases CGCGCCTGAAGGTGTCCGCCGCGCACGCCGCCCCCGCCCGTCCGCTCTTGCTGATCGACGCAGGGAACACGCGCATCAAA TGGGCGTGGATTGCCGGCGG
Product: biotin--protein ligase
Products: NA
Alternate protein names: Biotin--[acetyl-CoA-carboxylase] synthetase; Biotin--protein ligase; Type III pantothenate kinase; PanK-III; Pantothenic acid kinase [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSLAEPSAGWRLARERIQPSGPAAGWPVDVVEATGSTNADLMAAVRDATWPAYTATPAHAGNAPLVGARVLAAQRQTAGR GRQGRPWDGDHGLTFSIACAFAGEPAQLGGLSLAVGVAVVEAVAGYAEARGGSGQALSLKWPNDVQIAGRKLAGILVETV RTAPGRTWTVIGIGLNLERPHVLETTLGRGLSGVEELVDAPEANAVFSALLTSLGEHLQRFGLQGLAPFVAPFAARDAFA GERVRLWQDGSVVLEGVAHGIDAQGRLAIESGGRVQWIHSGEVSLRSADAEQP
Sequences:
>Translated_293_residues MSLAEPSAGWRLARERIQPSGPAAGWPVDVVEATGSTNADLMAAVRDATWPAYTATPAHAGNAPLVGARVLAAQRQTAGR GRQGRPWDGDHGLTFSIACAFAGEPAQLGGLSLAVGVAVVEAVAGYAEARGGSGQALSLKWPNDVQIAGRKLAGILVETV RTAPGRTWTVIGIGLNLERPHVLETTLGRGLSGVEELVDAPEANAVFSALLTSLGEHLQRFGLQGLAPFVAPFAARDAFA GERVRLWQDGSVVLEGVAHGIDAQGRLAIESGGRVQWIHSGEVSLRSADAEQP >Mature_292_residues SLAEPSAGWRLARERIQPSGPAAGWPVDVVEATGSTNADLMAAVRDATWPAYTATPAHAGNAPLVGARVLAAQRQTAGRG RQGRPWDGDHGLTFSIACAFAGEPAQLGGLSLAVGVAVVEAVAGYAEARGGSGQALSLKWPNDVQIAGRKLAGILVETVR TAPGRTWTVIGIGLNLERPHVLETTLGRGLSGVEELVDAPEANAVFSALLTSLGEHLQRFGLQGLAPFVAPFAARDAFAG ERVRLWQDGSVVLEGVAHGIDAQGRLAIESGGRVQWIHSGEVSLRSADAEQP
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis [H]
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the type III pantothenate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1790408, Length=219, Percent_Identity=33.7899543378995, Blast_Score=106, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004408 - InterPro: IPR003142 - InterPro: IPR004143 - InterPro: IPR008988 - InterPro: IPR004619 [H]
Pfam domain/function: PF02237 BPL_C; PF03099 BPL_LipA_LipB; PF03309 Bvg_acc_factor [H]
EC number: =6.3.4.15; =2.7.1.33 [H]
Molecular weight: Translated: 30392; Mature: 30260
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLAEPSAGWRLARERIQPSGPAAGWPVDVVEATGSTNADLMAAVRDATWPAYTATPAHA CCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCC GNAPLVGARVLAAQRQTAGRGRQGRPWDGDHGLTFSIACAFAGEPAQLGGLSLAVGVAVV CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHHHH EAVAGYAEARGGSGQALSLKWPNDVQIAGRKLAGILVETVRTAPGRTWTVIGIGLNLERP HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC HVLETTLGRGLSGVEELVDAPEANAVFSALLTSLGEHLQRFGLQGLAPFVAPFAARDAFA HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC GERVRLWQDGSVVLEGVAHGIDAQGRLAIESGGRVQWIHSGEVSLRSADAEQP CCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCC >Mature Secondary Structure SLAEPSAGWRLARERIQPSGPAAGWPVDVVEATGSTNADLMAAVRDATWPAYTATPAHA CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCEECCCCCC GNAPLVGARVLAAQRQTAGRGRQGRPWDGDHGLTFSIACAFAGEPAQLGGLSLAVGVAVV CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCHHHCCHHHHHHHHHH EAVAGYAEARGGSGQALSLKWPNDVQIAGRKLAGILVETVRTAPGRTWTVIGIGLNLERP HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC HVLETTLGRGLSGVEELVDAPEANAVFSALLTSLGEHLQRFGLQGLAPFVAPFAARDAFA HHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC GERVRLWQDGSVVLEGVAHGIDAQGRLAIESGGRVQWIHSGEVSLRSADAEQP CCEEEEEECCHHHHHHHHHCCCCCCEEEEECCCEEEEEECCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA