| Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010682 |
| Length | 3,942,557 |
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The map label for this gene is fabG [H]
Identifier: 187927213
GI number: 187927213
Start: 122547
End: 123434
Strand: Direct
Name: fabG [H]
Synonym: Rpic_0105
Alternate gene names: 187927213
Gene position: 122547-123434 (Clockwise)
Preceding gene: 187927212
Following gene: 187927214
Centisome position: 3.11
GC content: 68.69
Gene sequence:
>888_bases ATGTATCGCTCAGTCTTTCGACCGGGGCTGTTCCAGGGGCAGGTGGCCGTGGTGACGGGTGGCGGCAGCGGCATCGGCCG GTGTACTGCGCATGAGTTGGCGTCGCTGGGTGCGGCGGTCGCGTTGGTGGGGCGCAACGCAGAGAAGCTCGCCGCCGTGC GCACGGAGATCGTTGAAGCGGGCGGCACCGCGCACGCCTACGTCTGCAACATCCGCGACGAGGCTGCCGTGCAAGCCACC GTCGCGCAAATCTACGGCGAGCACGGCCGCATCGACGCGCTCGTCAACAACGCGGGCGGGCAGTTTCCCTCGCCGCTCAA GGACATTTCCGCCAAGGGCTGGGAAGCCGTCGTGCAGACGAACCTGACCGGCGGCTTCCTGATGGCGCGCGAGTGCCTCA ACCAGGCGATGCAGCAGCGCGGCGGCGCCATCGTCAATATCGTGGCGGACATGTGGGGCGGCATGCCCAACATGGGCCAC TCCGGCGCCGCGCGGGCGGGCATGGTGAACTTTACGGAGACGGCCGCATTCGAGTGGGCGCAATACGGCGTGCGCGTGAA CGCGGTAGCGCCGGGCTACGTCGCGTCGTCGGGCATGGATGCGTATCCGCCGTGGATGGCCGAGACCATCCGCAGCATGC CGTCGACGGTGCCGCTCGGGCGCTTTGCCACCGAGGCGGAAGTGTCTTCGGCCATCGTGTATCTGCTCTCGGAAGCCGCG GCATTCATTACCGGCACGACGTTGCGCGTGGACGGCGGCCGCCCGAACGTGCGGCCCGGTTCGCCCATGCCGGCTCCGCG TCATGGTGCCGAGCCGTTCAACGGCTTCCACCTGGCCGTGACGCCCAAGGTGCTGCAAGGCGAGGAGGACCGCCATGCCG GCGCTTGA
Upstream 100 bases:
>100_bases AGTGAAGGTCTACATGATCGGCGGCGGCGCGGAGGAAGTTCTCAGCGACCTTGCCGCGCGCCAACTCGGCTGGACCTAAC GCGCATTCAGGGAGAGAACC
Downstream 100 bases:
>100_bases ATCGCGCATCGTGCCGCAGAGCGACGCGTATCGGCAGAACCATGCCGCGCTCACGGAACTCGTCGGCCGGTTGCGCACGT TGGAAGATCGCACACGCGAC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MYRSVFRPGLFQGQVAVVTGGGSGIGRCTAHELASLGAAVALVGRNAEKLAAVRTEIVEAGGTAHAYVCNIRDEAAVQAT VAQIYGEHGRIDALVNNAGGQFPSPLKDISAKGWEAVVQTNLTGGFLMARECLNQAMQQRGGAIVNIVADMWGGMPNMGH SGAARAGMVNFTETAAFEWAQYGVRVNAVAPGYVASSGMDAYPPWMAETIRSMPSTVPLGRFATEAEVSSAIVYLLSEAA AFITGTTLRVDGGRPNVRPGSPMPAPRHGAEPFNGFHLAVTPKVLQGEEDRHAGA
Sequences:
>Translated_295_residues MYRSVFRPGLFQGQVAVVTGGGSGIGRCTAHELASLGAAVALVGRNAEKLAAVRTEIVEAGGTAHAYVCNIRDEAAVQAT VAQIYGEHGRIDALVNNAGGQFPSPLKDISAKGWEAVVQTNLTGGFLMARECLNQAMQQRGGAIVNIVADMWGGMPNMGH SGAARAGMVNFTETAAFEWAQYGVRVNAVAPGYVASSGMDAYPPWMAETIRSMPSTVPLGRFATEAEVSSAIVYLLSEAA AFITGTTLRVDGGRPNVRPGSPMPAPRHGAEPFNGFHLAVTPKVLQGEEDRHAGA >Mature_295_residues MYRSVFRPGLFQGQVAVVTGGGSGIGRCTAHELASLGAAVALVGRNAEKLAAVRTEIVEAGGTAHAYVCNIRDEAAVQAT VAQIYGEHGRIDALVNNAGGQFPSPLKDISAKGWEAVVQTNLTGGFLMARECLNQAMQQRGGAIVNIVADMWGGMPNMGH SGAARAGMVNFTETAAFEWAQYGVRVNAVAPGYVASSGMDAYPPWMAETIRSMPSTVPLGRFATEAEVSSAIVYLLSEAA AFITGTTLRVDGGRPNVRPGSPMPAPRHGAEPFNGFHLAVTPKVLQGEEDRHAGA
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=295, Percent_Identity=41.0169491525424, Blast_Score=211, Evalue=7e-55, Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=32.156862745098, Blast_Score=122, Evalue=4e-28, Organism=Homo sapiens, GI40254992, Length=242, Percent_Identity=35.1239669421488, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI4503301, Length=258, Percent_Identity=30.6201550387597, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=29.9610894941634, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=29.6, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI7705925, Length=249, Percent_Identity=30.1204819277108, Blast_Score=85, Evalue=6e-17, Organism=Homo sapiens, GI31542939, Length=199, Percent_Identity=32.6633165829146, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI59889578, Length=197, Percent_Identity=31.9796954314721, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI66933014, Length=188, Percent_Identity=29.2553191489362, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=27.2727272727273, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI210032110, Length=213, Percent_Identity=26.2910798122066, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI226371731, Length=189, Percent_Identity=28.042328042328, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI20149619, Length=192, Percent_Identity=27.6041666666667, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI109715829, Length=259, Percent_Identity=30.1158301158301, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4503817, Length=215, Percent_Identity=27.906976744186, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4504505, Length=215, Percent_Identity=27.4418604651163, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=24.0157480314961, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4758504, Length=265, Percent_Identity=29.4339622641509, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=33.1395348837209, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=32.6530612244898, Blast_Score=130, Evalue=8e-32, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=30.9803921568627, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1788459, Length=245, Percent_Identity=31.0204081632653, Blast_Score=107, Evalue=1e-24, Organism=Escherichia coli, GI2367175, Length=249, Percent_Identity=34.5381526104418, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=30.6451612903226, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=30.46875, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1787905, Length=245, Percent_Identity=28.1632653061224, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786812, Length=255, Percent_Identity=30.1960784313725, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=27.0161290322581, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=31.640625, Blast_Score=87, Evalue=9e-19, Organism=Escherichia coli, GI1789378, Length=259, Percent_Identity=27.027027027027, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=29.5081967213115, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787526, Length=260, Percent_Identity=25.3846153846154, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536025, Length=265, Percent_Identity=32.0754716981132, Blast_Score=133, Evalue=1e-31, Organism=Caenorhabditis elegans, GI17536651, Length=270, Percent_Identity=30, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI25147288, Length=249, Percent_Identity=31.7269076305221, Blast_Score=118, Evalue=4e-27, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=32.6923076923077, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=29.1187739463602, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17559104, Length=259, Percent_Identity=29.3436293436293, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17555706, Length=249, Percent_Identity=30.5220883534137, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17562906, Length=262, Percent_Identity=30.1526717557252, Blast_Score=109, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994604, Length=257, Percent_Identity=33.0739299610895, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17561272, Length=262, Percent_Identity=29.7709923664122, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI71994600, Length=258, Percent_Identity=31.3953488372093, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17562908, Length=262, Percent_Identity=29.3893129770992, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=29.5019157088123, Blast_Score=104, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=29.1187739463602, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17560150, Length=257, Percent_Identity=27.6264591439689, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17562990, Length=261, Percent_Identity=27.2030651340996, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=28.3524904214559, Blast_Score=97, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17562904, Length=259, Percent_Identity=26.6409266409266, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=31.7164179104478, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17551412, Length=265, Percent_Identity=29.0566037735849, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=29.2307692307692, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=29.5019157088123, Blast_Score=94, Evalue=9e-20, Organism=Caenorhabditis elegans, GI17544670, Length=265, Percent_Identity=26.7924528301887, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17563726, Length=264, Percent_Identity=28.7878787878788, Blast_Score=92, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=27.0992366412214, Blast_Score=88, Evalue=5e-18, Organism=Caenorhabditis elegans, GI115534694, Length=250, Percent_Identity=29.6, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=26.3779527559055, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17560676, Length=251, Percent_Identity=25.0996015936255, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17538182, Length=256, Percent_Identity=29.6875, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71982365, Length=199, Percent_Identity=28.1407035175879, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=29.0155440414508, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17508895, Length=213, Percent_Identity=27.2300469483568, Blast_Score=74, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17558628, Length=203, Percent_Identity=30.5418719211823, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=28.4974093264249, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=28.6458333333333, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17508651, Length=250, Percent_Identity=24.4, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=253, Percent_Identity=29.6442687747036, Blast_Score=126, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6322861, Length=245, Percent_Identity=30.2040816326531, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI23397609, Length=258, Percent_Identity=36.046511627907, Blast_Score=131, Evalue=4e-31, Organism=Drosophila melanogaster, GI28571526, Length=257, Percent_Identity=36.1867704280156, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI21357041, Length=258, Percent_Identity=34.8837209302326, Blast_Score=125, Evalue=4e-29, Organism=Drosophila melanogaster, GI24644339, Length=258, Percent_Identity=33.7209302325581, Blast_Score=117, Evalue=6e-27, Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=31.0756972111554, Blast_Score=111, Evalue=6e-25, Organism=Drosophila melanogaster, GI21355319, Length=246, Percent_Identity=27.6422764227642, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24644337, Length=257, Percent_Identity=32.6848249027237, Blast_Score=98, Evalue=8e-21, Organism=Drosophila melanogaster, GI28574402, Length=195, Percent_Identity=32.3076923076923, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24584744, Length=195, Percent_Identity=32.3076923076923, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=29.6747967479675, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24584748, Length=207, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI161076933, Length=207, Percent_Identity=31.8840579710145, Blast_Score=81, Evalue=8e-16, Organism=Drosophila melanogaster, GI21357673, Length=195, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI18859837, Length=192, Percent_Identity=32.2916666666667, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24640492, Length=215, Percent_Identity=26.046511627907, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI24641232, Length=214, Percent_Identity=26.1682242990654, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571387, Length=234, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007236, Length=195, Percent_Identity=26.1538461538462, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=131, Percent_Identity=34.3511450381679, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 30795; Mature: 30795
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRSVFRPGLFQGQVAVVTGGGSGIGRCTAHELASLGAAVALVGRNAEKLAAVRTEIVEA CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GGTAHAYVCNIRDEAAVQATVAQIYGEHGRIDALVNNAGGQFPSPLKDISAKGWEAVVQT CCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHEE NLTGGFLMARECLNQAMQQRGGAIVNIVADMWGGMPNMGHSGAARAGMVNFTETAAFEWA CCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH QYGVRVNAVAPGYVASSGMDAYPPWMAETIRSMPSTVPLGRFATEAEVSSAIVYLLSEAA HHCEEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFITGTTLRVDGGRPNVRPGSPMPAPRHGAEPFNGFHLAVTPKVLQGEEDRHAGA HHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCC >Mature Secondary Structure MYRSVFRPGLFQGQVAVVTGGGSGIGRCTAHELASLGAAVALVGRNAEKLAAVRTEIVEA CCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC GGTAHAYVCNIRDEAAVQATVAQIYGEHGRIDALVNNAGGQFPSPLKDISAKGWEAVVQT CCCEEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHEE NLTGGFLMARECLNQAMQQRGGAIVNIVADMWGGMPNMGHSGAARAGMVNFTETAAFEWA CCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH QYGVRVNAVAPGYVASSGMDAYPPWMAETIRSMPSTVPLGRFATEAEVSSAIVYLLSEAA HHCEEEEEECCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH AFITGTTLRVDGGRPNVRPGSPMPAPRHGAEPFNGFHLAVTPKVLQGEEDRHAGA HHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]