Click here to switch to the map view.

The map label for this gene is 187927179

Identifier: 187927179

GI number: 187927179

Start: 84093

End: 84569

Strand: Reverse

Name: 187927179

Synonym: Rpic_0069

Alternate gene names: NA

Gene position: 84569-84093 (Counterclockwise)

Preceding gene: 187927182

Following gene: 187927178

Centisome position: 2.15

GC content: 60.38

Gene sequence:

>477_bases
ATGAACAAAGCTGAAATCCCTGTGGCGCAACGCGCCGTGCTGTCGATGCTGCTGGACGATCACCGCGAGGTGAAAAAACT
GTTCAAGACGTTCCAGCAGGAGAAAGACGAAGCGACCCGCGAGCAAATCGTGCGCGAAGCGTGTGAAAAGTTGACCGTGC
ACACGCAGCTTGAAGAAGAGGTGTTCTACCCGTACGTACGCGACAACGGCGGCGAAGCGTTCAAGGACCTCGTCGACGAA
GCCGTGGTGGAGCACGCCACCGCAAAGGATCTGATCCAGCAGTTGAACGGCATGCACGCGGGCGACGATCTGTTCGCGGC
CAAGTTCACCGTGCTGGCCGAGTACGTCTCGCACCACGTGGAAGAGGAAGAGACCGAACTCTTTCCCAAGCTGGTCCGAC
AGCACGTCGACCTGACGCCGCTGCAGGAGACCATGGCCGCGCGCAAGGAAGCGCTGCTGGCCGAGACGGCGAGCTGA

Upstream 100 bases:

>100_bases
AAGCTTGCCTGCGGCACATCGCCCGCAAAGGCGCGCGTGCGGCATGCCGCTTGCTCGACGGTACGGCGCATCAAACCAGA
AACCCCTACCGGAGAGCCTC

Downstream 100 bases:

>100_bases
CCGAGTTGACGGACCCGAGACGGACCCGACCACCTGACACCGGACAGACACCATGCAAGCCACCGTCTGCGATTTCCTCG
TCGCCCGCCTGTACGAGTGG

Product: Hemerythrin HHE cation binding domain-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MNKAEIPVAQRAVLSMLLDDHREVKKLFKTFQQEKDEATREQIVREACEKLTVHTQLEEEVFYPYVRDNGGEAFKDLVDE
AVVEHATAKDLIQQLNGMHAGDDLFAAKFTVLAEYVSHHVEEEETELFPKLVRQHVDLTPLQETMAARKEALLAETAS

Sequences:

>Translated_158_residues
MNKAEIPVAQRAVLSMLLDDHREVKKLFKTFQQEKDEATREQIVREACEKLTVHTQLEEEVFYPYVRDNGGEAFKDLVDE
AVVEHATAKDLIQQLNGMHAGDDLFAAKFTVLAEYVSHHVEEEETELFPKLVRQHVDLTPLQETMAARKEALLAETAS
>Mature_158_residues
MNKAEIPVAQRAVLSMLLDDHREVKKLFKTFQQEKDEATREQIVREACEKLTVHTQLEEEVFYPYVRDNGGEAFKDLVDE
AVVEHATAKDLIQQLNGMHAGDDLFAAKFTVLAEYVSHHVEEEETELFPKLVRQHVDLTPLQETMAARKEALLAETAS

Specific function: Unknown

COG id: COG5592

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18035; Mature: 18035

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAEIPVAQRAVLSMLLDDHREVKKLFKTFQQEKDEATREQIVREACEKLTVHTQLEEE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYPYVRDNGGEAFKDLVDEAVVEHATAKDLIQQLNGMHAGDDLFAAKFTVLAEYVSHHV
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
EEEETELFPKLVRQHVDLTPLQETMAARKEALLAETAS
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKAEIPVAQRAVLSMLLDDHREVKKLFKTFQQEKDEATREQIVREACEKLTVHTQLEEE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYPYVRDNGGEAFKDLVDEAVVEHATAKDLIQQLNGMHAGDDLFAAKFTVLAEYVSHHV
HHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
EEEETELFPKLVRQHVDLTPLQETMAARKEALLAETAS
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA