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The map label for this gene is 187918551

Identifier: 187918551

GI number: 187918551

Start: 743257

End: 743505

Strand: Direct

Name: 187918551

Synonym: BH0696

Alternate gene names: NA

Gene position: 743257-743505 (Clockwise)

Preceding gene: 187918550

Following gene: 187918552

Centisome position: 80.59

GC content: 34.54

Gene sequence:

>249_bases
ATGAAAGAGTACGGTAATGAAATTGAACTTATAGAATTTGTGGTAAAATCTCTTGTAGATAAAAGAGATGAGGTCAAGTT
GAATGTAGTTGAAGGTGAGAAATCAACTATTTTAGAATTAAGAGTTTCTGCAAATGATGTTGGAAAGATAATTGGAAGAA
GAGGGCGCATTGCAAGGGCTATTAGGACACTTCTTAGTGCTTGTGCTGCTAAAACAAATAGGAGAGTTCAGCTAGAAATT
TTGGACTAA

Upstream 100 bases:

>100_bases
TAAATTTAGAGATTGGATAGGCAAAGGAGCTATTCCAAGTGATACTGTTAAGAGGATTTTAAATAAAAATAATTTTAAAG
TTGAGAGTTAGGAGGAGTTA

Downstream 100 bases:

>100_bases
TTTATGTTTGTAAAAGGCATAATATTGTCATCTTATGGAATTAATGGATATGCTAAAGTTAAGAGCATATCCAATAATTT
TAATGATTTCCTTGATTTAA

Product: RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKEYGNEIELIEFVVKSLVDKRDEVKLNVVEGEKSTILELRVSANDVGKIIGRRGRIARAIRTLLSACAAKTNRRVQLEI
LD

Sequences:

>Translated_82_residues
MKEYGNEIELIEFVVKSLVDKRDEVKLNVVEGEKSTILELRVSANDVGKIIGRRGRIARAIRTLLSACAAKTNRRVQLEI
LD
>Mature_82_residues
MKEYGNEIELIEFVVKSLVDKRDEVKLNVVEGEKSTILELRVSANDVGKIIGRRGRIARAIRTLLSACAAKTNRRVQLEI
LD

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 9252; Mature: 9252

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEYGNEIELIEFVVKSLVDKRDEVKLNVVEGEKSTILELRVSANDVGKIIGRRGRIARA
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCCCHHHHH
IRTLLSACAAKTNRRVQLEILD
HHHHHHHHHHCCCCEEEEEEEC
>Mature Secondary Structure
MKEYGNEIELIEFVVKSLVDKRDEVKLNVVEGEKSTILELRVSANDVGKIIGRRGRIARA
CCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEECCHHHHHHHCCCCHHHHH
IRTLLSACAAKTNRRVQLEILD
HHHHHHHHHHCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]