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The map label for this gene is xylR [H]

Identifier: 187918548

GI number: 187918548

Start: 740382

End: 741590

Strand: Direct

Name: xylR [H]

Synonym: BH0693

Alternate gene names: 187918548

Gene position: 740382-741590 (Clockwise)

Preceding gene: 187918547

Following gene: 187918549

Centisome position: 80.28

GC content: 31.1

Gene sequence:

>1209_bases
ATGCAGGGTGAGAACATGGTTTCAATTAGAGGTGGTAATAGAAAAAAAATACTCCTTAGTTTGAAGAATATGCAGTATTC
AAGGACAGATCTGGCTCGTAAATTAGCATTGACGAATGCGGCTGTGACTATTCTTACTAATCATATGATCAAGGAGAATA
TTTTAGTTGAAGTTGGTTCGAAGGAATCAGGCATCAAAAAGCATGGGCGAAAAGAAATACTTCTTGATATCAATAAAGAT
TTTGCATATTCAATGGGGGTAATTATTTCAAGTAATTATTTTCAAATAGGAATTGCAAACCTTAAATGTGAGGTTTTAAT
AAGTGAGATTTATTCTTTTGAACCACCGGTTAGCGCTTATGAGATCTTGGAAAAAATTAAAGATCACATGATTGAGATTA
TCTGGAAACATAATTTTTCAAGGGATAAATTTATCGGATTGGGATTTAGTATTACTGGTATCATTAAGGATAAGGAATCT
GGCATTGTTAATGATAGTCATGGTGCATGGATTGAGAAGGATGTACCTGTTAAGGCTATATTAGAAGAATATTTTTCACT
TACCGTATATCTTGAGAGTTATGTTAAAAATCTTTCTCTTGCTGAATTTATGGGTAAGAATGTAGATAACATTATGTTTT
TCGATTATACAGATACCGCTGAGCTTTCTATATGGTCTGATGGTAATGTTTATTCTGGATTTAATAATAAATCTGGTATG
GTTAGTCATATGGTGATTGATTATGGAGGAGAGAAGAATTGTCCTACATGTGGAAATAAGGGGTGTGTTAATATGTTAAT
ATCTAATTTTGCACTTCAGCGTTTAATTTCAAAAGAGTTTATGAATGGAGAGATTCCTGAGCTTTATGACAAATATGAGG
GTAGGCTTAAAAAAGTTACGATATATGATATTTTTGCTCTTCATGATAAATATGAATTTATACATAAAATAATGGAAGAT
ACAGTAAAATACTTGGCAATAGTTATTATCAATATTCAAAGGGTGCTTGATTTTAATTATTTAGTGCTTTATGGGCAAAG
TTTTAAACTTAAGAGTTTTTTTGACTTATTAAAAGAAGAAATAAAGAGGTTGAATAAAGAGAGTATAATATTGAAGCTTA
GTTCTCTAGACACTGAAGTATCTGTCGTTGGACCTGCTTCTAGTGTTATATTCAATAAATTCTATTTGACAGGGGGAGAT
ATTGATTAA

Upstream 100 bases:

>100_bases
CTTTTTGTCTTGTAAGTGCTACTAGAATATTAGGATGATTTTTTGATATTATGTCTTATTATTAATATTTTTTTATTTTA
AAAATAAAGGAGGTTGTGTT

Downstream 100 bases:

>100_bases
TATTTCCTTTTTTTGTATTGTATATTTTGTAGGATTTTGACAAATGAAGGTGATTTTTAGTGTTTGAGAAGTTAGGTGCA
GGTTTTAGAGATTTTGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMIKENILVEVGSKESGIKKHGRKEILLDINKD
FAYSMGVIISSNYFQIGIANLKCEVLISEIYSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFSITGIIKDKES
GIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSLAEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGM
VSHMVIDYGGEKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVTIYDIFALHDKYEFIHKIMED
TVKYLAIVIINIQRVLDFNYLVLYGQSFKLKSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID

Sequences:

>Translated_402_residues
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMIKENILVEVGSKESGIKKHGRKEILLDINKD
FAYSMGVIISSNYFQIGIANLKCEVLISEIYSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFSITGIIKDKES
GIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSLAEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGM
VSHMVIDYGGEKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVTIYDIFALHDKYEFIHKIMED
TVKYLAIVIINIQRVLDFNYLVLYGQSFKLKSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID
>Mature_402_residues
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMIKENILVEVGSKESGIKKHGRKEILLDINKD
FAYSMGVIISSNYFQIGIANLKCEVLISEIYSFEPPVSAYEILEKIKDHMIEIIWKHNFSRDKFIGLGFSITGIIKDKES
GIVNDSHGAWIEKDVPVKAILEEYFSLTVYLESYVKNLSLAEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGM
VSHMVIDYGGEKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVTIYDIFALHDKYEFIHKIMED
TVKYLAIVIINIQRVLDFNYLVLYGQSFKLKSFFDLLKEEIKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGD
ID

Specific function: Transcriptional repressor of xylose-utilizing enzymes [H]

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1786891, Length=268, Percent_Identity=25.7462686567164, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1787878, Length=246, Percent_Identity=21.9512195121951, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 45775; Mature: 45775

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMIKENILVEVGS
CCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
KESGIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIANLKCEVLISEIYSFEPPVSAY
CCCCHHHCCCCEEEEECCCCHHEEECEEEECCEEEEEECCCCHHHHHHHHHCCCCCHHHH
EILEKIKDHMIEIIWKHNFSRDKFIGLGFSITGIIKDKESGIVNDSHGAWIEKDVPVKAI
HHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEECCCCCEECCCCCEEECCCCHHHH
LEEYFSLTVYLESYVKNLSLAEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGM
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCC
VSHMVIDYGGEKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVT
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEE
IYDIFALHDKYEFIHKIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKLKSFFDLLKEE
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
IKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGDID
HHHCCCCEEEEEEECCCCEEEEECCCHHHHEEEEEEECCCCC
>Mature Secondary Structure
MQGENMVSIRGGNRKKILLSLKNMQYSRTDLARKLALTNAAVTILTNHMIKENILVEVGS
CCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECC
KESGIKKHGRKEILLDINKDFAYSMGVIISSNYFQIGIANLKCEVLISEIYSFEPPVSAY
CCCCHHHCCCCEEEEECCCCHHEEECEEEECCEEEEEECCCCHHHHHHHHHCCCCCHHHH
EILEKIKDHMIEIIWKHNFSRDKFIGLGFSITGIIKDKESGIVNDSHGAWIEKDVPVKAI
HHHHHHHHHHHHHHHHCCCCCCCEEEECEEEEEEEEECCCCCEECCCCCEEECCCCHHHH
LEEYFSLTVYLESYVKNLSLAEFMGKNVDNIMFFDYTDTAELSIWSDGNVYSGFNNKSGM
HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEECCCCEEEEECCCCEECCCCCCCCC
VSHMVIDYGGEKNCPTCGNKGCVNMLISNFALQRLISKEFMNGEIPELYDKYEGRLKKVT
EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEE
IYDIFALHDKYEFIHKIMEDTVKYLAIVIINIQRVLDFNYLVLYGQSFKLKSFFDLLKEE
EEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
IKRLNKESIILKLSSLDTEVSVVGPASSVIFNKFYLTGGDID
HHHCCCCEEEEEEECCCCEEEEECCCHHHHEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2544559 [H]