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The map label for this gene is cheD [H]

Identifier: 187918468

GI number: 187918468

Start: 640678

End: 641205

Strand: Direct

Name: cheD [H]

Synonym: BH0606

Alternate gene names: 187918468

Gene position: 640678-641205 (Clockwise)

Preceding gene: 187918467

Following gene: 187918469

Centisome position: 69.46

GC content: 33.33

Gene sequence:

>528_bases
ATGTTTATAAAAAATTTTAAGAGAGTAATTGATTTTATGTTAAATCATTTTAATTTTAAATTAAAGAGAGATGTTACAAT
AATAGTGCCAGGTGAAGCTTTTGTGTCAAATGATAGGGTTATCTCTACGATACTTGGTTCTTGTGTTGCTGTTGTACTTT
ATGATGAGATGCGTAAGCTTATAGGAGTAAATCATTATGTACTAGTGAAATCTGATTCAGTGATTAATGCTGCACAGAGA
GGTAGATATGGGGTTTATGCTATTCCTATGTTAATTGATGCTATGCTAGGGAGTGGTGCATCAAAAAGTAATCTTAAAGC
CAAACTTTTTGGAGGTGCTAACTTTATGGCCAAAGAGACAATAAGGGTAGGTATTGAGAATTCAGAGTTTGCCCTTAATT
CATTAGCCAAATATGGTATTCCGGTTGTAGCTTGCGATTTTGATCAGTCTAAATCCAGAAAGATTTTTGTTTTTCCTGAA
AATTTTAGGGTTATTGTGGAATACCCAGATGGTGCTAAAGTTTTCTAG

Upstream 100 bases:

>100_bases
AGGTAGTGGGAATATTAATTTTGGATACTTTTAACTTAGAGGTGCTAAATTGATTTGTTTAGTTGCGTTTAAGAGTTATA
AATTTTAATAGCATTTATGG

Downstream 100 bases:

>100_bases
CTTGCCTTAAATTAATTTAGGCTTCATGAGTTTCAGTGTGTGATTGTTATTAATGATGGGATTTTTTAATTGTTGGTAGG
TATTAGGTGTAGGAAAGCTA

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MFIKNFKRVIDFMLNHFNFKLKRDVTIIVPGEAFVSNDRVISTILGSCVAVVLYDEMRKLIGVNHYVLVKSDSVINAAQR
GRYGVYAIPMLIDAMLGSGASKSNLKAKLFGGANFMAKETIRVGIENSEFALNSLAKYGIPVVACDFDQSKSRKIFVFPE
NFRVIVEYPDGAKVF

Sequences:

>Translated_175_residues
MFIKNFKRVIDFMLNHFNFKLKRDVTIIVPGEAFVSNDRVISTILGSCVAVVLYDEMRKLIGVNHYVLVKSDSVINAAQR
GRYGVYAIPMLIDAMLGSGASKSNLKAKLFGGANFMAKETIRVGIENSEFALNSLAKYGIPVVACDFDQSKSRKIFVFPE
NFRVIVEYPDGAKVF
>Mature_175_residues
MFIKNFKRVIDFMLNHFNFKLKRDVTIIVPGEAFVSNDRVISTILGSCVAVVLYDEMRKLIGVNHYVLVKSDSVINAAQR
GRYGVYAIPMLIDAMLGSGASKSNLKAKLFGGANFMAKETIRVGIENSEFALNSLAKYGIPVVACDFDQSKSRKIFVFPE
NFRVIVEYPDGAKVF

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 19528; Mature: 19528

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIKNFKRVIDFMLNHFNFKLKRDVTIIVPGEAFVSNDRVISTILGSCVAVVLYDEMRKL
CCHHHHHHHHHHHHHHCCEEEECCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
IGVNHYVLVKSDSVINAAQRGRYGVYAIPMLIDAMLGSGASKSNLKAKLFGGANFMAKET
HCCCEEEEEECCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEE
IRVGIENSEFALNSLAKYGIPVVACDFDQSKSRKIFVFPENFRVIVEYPDGAKVF
EEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCC
>Mature Secondary Structure
MFIKNFKRVIDFMLNHFNFKLKRDVTIIVPGEAFVSNDRVISTILGSCVAVVLYDEMRKL
CCHHHHHHHHHHHHHHCCEEEECCEEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH
IGVNHYVLVKSDSVINAAQRGRYGVYAIPMLIDAMLGSGASKSNLKAKLFGGANFMAKET
HCCCEEEEEECCCHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEE
IRVGIENSEFALNSLAKYGIPVVACDFDQSKSRKIFVFPENFRVIVEYPDGAKVF
EEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA