Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918461
Identifier: 187918461
GI number: 187918461
Start: 632275
End: 633831
Strand: Direct
Name: 187918461
Synonym: BH0600
Alternate gene names: NA
Gene position: 632275-633831 (Clockwise)
Preceding gene: 187918460
Following gene: 187918462
Centisome position: 68.55
GC content: 25.18
Gene sequence:
>1557_bases TTGGCAGTATTTTTTAAGAGTCAATCTATTATTTTAAGTTTTATTTTTTTAATTTTTTTAAGTTTATTTGTTTTTTCCGG ATTTTTATTTTATTTAAAGCCTGTAATTTATGAAATATCACCAATGCCCGCTTCACATGAAAATGTAATTGTAATTAAAG GGCGTAATTTAGGCAATAAGATTGGAGAGGTTAATATTAATAATCATTATTTAACTAAAAGTAGTATTATTAGTTGGAGC AATAAGAAGGTAGTTTTTAGAATTACAGATGAAATCTCTTCAGGCCTTGTTTTTGTAAAGAGCGAGGAAGGGATTAGTAA TGAACTTTTTCTTGTAATTAGTAGGCAAGTTCCAATTAAACTTGAAGAGAAAACCAAACCTTTTCTTTTTGATACTGAGA ATCTGGTTTTAATGACAAATGTTCCTGTTACATTAAGAGGCAAAAATTTAATATCAGATTTTGCTGTTGTTGAGATATTT ATTCAAACAAAACATGAACTTTATAAAATCCTTTCCAGAGATATATTGACATTGAGTCAAGAGGAAATAAAGTTTATTCC TCCAAAGACTTTGCATATTGATGGTGAGATTTTTTTACTAGTTGACGGAGTTGAAAGTAATAGAATTCCTTTTAATTTTG ATAAAAATTTTTTTATGTGGAATTTAAAGAGAAGTAGAAATTTTAAAATATTTCATGAAATTTATTTTGTTCAGGCTAAT AGTAAGGAGGATTCTAGTGCGATATCAGATGACATTAATTTTAATGTTTTTTATTTAAGTCCAATTGAAAATGAAAGACA AAAAATTAAATTTTCAGATAATAATGGAAGTGTATTGGATTTAGATAATTTATTTTTTAAAAGTTTGAAGTCAAATACAT ATCATTTAAAATTTGAAGTTGAGACTTATAAATTGGATTTAGATATTTTTGATAGAAATGCTTTAAAGCGTATTAAAGTA AATACGGATAGTGATATGTATGAATTTAAAACTTATGTTTTAAATAAGAGGAATCGTTATTTATCTTATGATTCACTTGA CTTAAGTCCAATTAACTTAAATATAAATAACAGGGATTCAGCTTATGAATTGGCAAAATCTATTATTGATGCTTTAATTT TGCATTTTACGGTTATAGATAATGATTTAACTTTGGATGAGTCTATTAAAATGAGAGAGATTTCAGCTGATAATTTGATC TTGCTTACGAATTTATTGTTTTTACGAAATAATATACCTTTAAGAAACGCGGTTGGATTTTATTTTGATTCTAAATCTTC TAGTCTTAAGAAACATATTTGGTGTGAATTTTTTTTAGAGCATGTTGGATTTATTTATTTTGATATAGTAAATGCAGTAT TATTTAGAGATAGTTCTAATTATTTTTTGAATATGTCAGAGAATTATATTCATTATGGGTATAAGGAAGATTATGATGAT GACTTATTGGCTGATGAATATTTTGACCTAGTATTGTTTAAATATAAAAGCTTGACAAATAGTAATTATTCTTTGAATTA TAGGATTACTTTGGAGGAAAATATTAATGATAGATAG
Upstream 100 bases:
>100_bases AGACTTTAAGCGTGCTGATGAGATTAGAGAATATTTTCGCTCTAAGGGTTTTGTGTTAATTGATACTGAAGAAGGGACTA AGGTTAAAAGAGGGTAGTTT
Downstream 100 bases:
>100_bases CATTTTATTTGATTTAATTGAAAGGGAAGTTAAGAGGGAGAAAGAAAATATTGAATTAATTGCTTCAGAAAATTTTGTCT CATCAGATGTAAGAAGGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MAVFFKSQSIILSFIFLIFLSLFVFSGFLFYLKPVIYEISPMPASHENVIVIKGRNLGNKIGEVNINNHYLTKSSIISWS NKKVVFRITDEISSGLVFVKSEEGISNELFLVISRQVPIKLEEKTKPFLFDTENLVLMTNVPVTLRGKNLISDFAVVEIF IQTKHELYKILSRDILTLSQEEIKFIPPKTLHIDGEIFLLVDGVESNRIPFNFDKNFFMWNLKRSRNFKIFHEIYFVQAN SKEDSSAISDDINFNVFYLSPIENERQKIKFSDNNGSVLDLDNLFFKSLKSNTYHLKFEVETYKLDLDIFDRNALKRIKV NTDSDMYEFKTYVLNKRNRYLSYDSLDLSPINLNINNRDSAYELAKSIIDALILHFTVIDNDLTLDESIKMREISADNLI LLTNLLFLRNNIPLRNAVGFYFDSKSSSLKKHIWCEFFLEHVGFIYFDIVNAVLFRDSSNYFLNMSENYIHYGYKEDYDD DLLADEYFDLVLFKYKSLTNSNYSLNYRITLEENINDR
Sequences:
>Translated_518_residues MAVFFKSQSIILSFIFLIFLSLFVFSGFLFYLKPVIYEISPMPASHENVIVIKGRNLGNKIGEVNINNHYLTKSSIISWS NKKVVFRITDEISSGLVFVKSEEGISNELFLVISRQVPIKLEEKTKPFLFDTENLVLMTNVPVTLRGKNLISDFAVVEIF IQTKHELYKILSRDILTLSQEEIKFIPPKTLHIDGEIFLLVDGVESNRIPFNFDKNFFMWNLKRSRNFKIFHEIYFVQAN SKEDSSAISDDINFNVFYLSPIENERQKIKFSDNNGSVLDLDNLFFKSLKSNTYHLKFEVETYKLDLDIFDRNALKRIKV NTDSDMYEFKTYVLNKRNRYLSYDSLDLSPINLNINNRDSAYELAKSIIDALILHFTVIDNDLTLDESIKMREISADNLI LLTNLLFLRNNIPLRNAVGFYFDSKSSSLKKHIWCEFFLEHVGFIYFDIVNAVLFRDSSNYFLNMSENYIHYGYKEDYDD DLLADEYFDLVLFKYKSLTNSNYSLNYRITLEENINDR >Mature_517_residues AVFFKSQSIILSFIFLIFLSLFVFSGFLFYLKPVIYEISPMPASHENVIVIKGRNLGNKIGEVNINNHYLTKSSIISWSN KKVVFRITDEISSGLVFVKSEEGISNELFLVISRQVPIKLEEKTKPFLFDTENLVLMTNVPVTLRGKNLISDFAVVEIFI QTKHELYKILSRDILTLSQEEIKFIPPKTLHIDGEIFLLVDGVESNRIPFNFDKNFFMWNLKRSRNFKIFHEIYFVQANS KEDSSAISDDINFNVFYLSPIENERQKIKFSDNNGSVLDLDNLFFKSLKSNTYHLKFEVETYKLDLDIFDRNALKRIKVN TDSDMYEFKTYVLNKRNRYLSYDSLDLSPINLNINNRDSAYELAKSIIDALILHFTVIDNDLTLDESIKMREISADNLIL LTNLLFLRNNIPLRNAVGFYFDSKSSSLKKHIWCEFFLEHVGFIYFDIVNAVLFRDSSNYFLNMSENYIHYGYKEDYDDD LLADEYFDLVLFKYKSLTNSNYSLNYRITLEENINDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60730; Mature: 60599
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFFKSQSIILSFIFLIFLSLFVFSGFLFYLKPVIYEISPMPASHENVIVIKGRNLGNK CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCC IGEVNINNHYLTKSSIISWSNKKVVFRITDEISSGLVFVKSEEGISNELFLVISRQVPIK CCEEECCCEEEEHHHEEEECCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEE LEEKTKPFLFDTENLVLMTNVPVTLRGKNLISDFAVVEIFIQTKHELYKILSRDILTLSQ ECCCCCCEEEECCCEEEEECCCEEEECCHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCC EEIKFIPPKTLHIDGEIFLLVDGVESNRIPFNFDKNFFMWNLKRSRNFKIFHEIYFVQAN CCEEECCCEEEEECCEEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEEEEEEEEC SKEDSSAISDDINFNVFYLSPIENERQKIKFSDNNGSVLDLDNLFFKSLKSNTYHLKFEV CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCEEEEEEEE ETYKLDLDIFDRNALKRIKVNTDSDMYEFKTYVLNKRNRYLSYDSLDLSPINLNINNRDS EEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCH AYELAKSIIDALILHFTVIDNDLTLDESIKMREISADNLILLTNLLFLRNNIPLRNAVGF HHHHHHHHHHHHHHEEEEECCCCEECCCCEEEEECCCCEEEEEHHHHHHCCCCCHHCEEE YFDSKSSSLKKHIWCEFFLEHVGFIYFDIVNAVLFRDSSNYFLNMSENYIHYGYKEDYDD EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEECCCCCCCCC DLLADEYFDLVLFKYKSLTNSNYSLNYRITLEENINDR CHHHHHHHHHHEEEEHHCCCCCEEEEEEEEEECCCCCC >Mature Secondary Structure AVFFKSQSIILSFIFLIFLSLFVFSGFLFYLKPVIYEISPMPASHENVIVIKGRNLGNK EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCC IGEVNINNHYLTKSSIISWSNKKVVFRITDEISSGLVFVKSEEGISNELFLVISRQVPIK CCEEECCCEEEEHHHEEEECCCEEEEEEECCCCCCEEEEECCCCCCCEEEEEEECCCCEE LEEKTKPFLFDTENLVLMTNVPVTLRGKNLISDFAVVEIFIQTKHELYKILSRDILTLSQ ECCCCCCEEEECCCEEEEECCCEEEECCHHHHHHHEEEEEHHHHHHHHHHHHHHHHHCCC EEIKFIPPKTLHIDGEIFLLVDGVESNRIPFNFDKNFFMWNLKRSRNFKIFHEIYFVQAN CCEEECCCEEEEECCEEEEEEECCCCCCCCEEECCCEEEEEECCCCCEEEEEEEEEEEEC SKEDSSAISDDINFNVFYLSPIENERQKIKFSDNNGSVLDLDNLFFKSLKSNTYHLKFEV CCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEHHHHHHHHHCCCEEEEEEEE ETYKLDLDIFDRNALKRIKVNTDSDMYEFKTYVLNKRNRYLSYDSLDLSPINLNINNRDS EEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEECCCCCEEEEEEECCCCH AYELAKSIIDALILHFTVIDNDLTLDESIKMREISADNLILLTNLLFLRNNIPLRNAVGF HHHHHHHHHHHHHHEEEEECCCCEECCCCEEEEECCCCEEEEEHHHHHHCCCCCHHCEEE YFDSKSSSLKKHIWCEFFLEHVGFIYFDIVNAVLFRDSSNYFLNMSENYIHYGYKEDYDD EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEEECCCEEECCCCCCCCC DLLADEYFDLVLFKYKSLTNSNYSLNYRITLEENINDR CHHHHHHHHHHEEEEHHCCCCCEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA