Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918396
Identifier: 187918396
GI number: 187918396
Start: 549521
End: 550288
Strand: Direct
Name: 187918396
Synonym: BH0535
Alternate gene names: NA
Gene position: 549521-550288 (Clockwise)
Preceding gene: 187918395
Following gene: 187918397
Centisome position: 59.58
GC content: 29.82
Gene sequence:
>768_bases GTGTGTGTATGGAAGATGTATATGAGTAGATATTTTATAACAATTCTGTTTTTTTTTATTCATGGTTTTATTTTTGGGAT TAATTTAGAGAGTGTTGATTTTTACCGCAGTCTTGATAAGGAAGAGTTATTATTTGTGATTCACTTATTGGAGCGAGAGA AAAATTTGACTCAAAAAAATGAATTTTTTACGTATATTGATCTAGCAAAGCGGGTTTTAACTGAAAGGGGTGTTCAAGTT TTAAGTGGCGGTAATGAGTTAGATGGTATGCATCATATTAATATTCTGCAACGCCCAGAGAATTATAATAGTTCGAAGTT CGTCTTAAAGGCCTCGAAAGATTTAAATATTTTTGTTTATTTTGATGGTAGTGATAGATTTTTAAAAACTTTAGATGGGC GCAATGTAGGTGTTCAAGATGGTAATTTTGTGATTTTAGAGCCAGTATCCTTTAAAGGGTATGATAATGTATCAAGTGAG CATACTACTATTGAAATTTATGAGACGAGTATTTTAAGTCCTGATTTTAGTAAGTTTGTTTTAGATAAATTGAAACCTTT TGTATATGTTAGGGAATTGAATAAGAGGGTTTACCTTGATGATATTTCAAAGTTATCGAAGGGGGAACTTTTATTTTTAT TTTATGAATTGTTTCCCATTTCTAGGTTAAAGGGTTTACAGGATTGGTATGATTTTGGATTTTCATCTATTTTAAGAGAA ATTAAAAAAGTTTATGACATAAGAATAAATGCAAGGAAAAGGGAATGA
Upstream 100 bases:
>100_bases GTAAATAAAGTCTTTAAATCTGAGGTAAGGGATGCTTTAATTTTAAATGAGGTAATGGGTAGCGATCATTGTCCTGTTTT TTTAGAGTTAAAGCAGTAAA
Downstream 100 bases:
>100_bases AATACGAACATATTCATATTAACAATATTAGTATATTAAAATTTGTCTTTTTAATTTTGGTCTTTCTGTTTTTATCTTGT TCATCTGCTAAGTTAAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MCVWKMYMSRYFITILFFFIHGFIFGINLESVDFYRSLDKEELLFVIHLLEREKNLTQKNEFFTYIDLAKRVLTERGVQV LSGGNELDGMHHINILQRPENYNSSKFVLKASKDLNIFVYFDGSDRFLKTLDGRNVGVQDGNFVILEPVSFKGYDNVSSE HTTIEIYETSILSPDFSKFVLDKLKPFVYVRELNKRVYLDDISKLSKGELLFLFYELFPISRLKGLQDWYDFGFSSILRE IKKVYDIRINARKRE
Sequences:
>Translated_255_residues MCVWKMYMSRYFITILFFFIHGFIFGINLESVDFYRSLDKEELLFVIHLLEREKNLTQKNEFFTYIDLAKRVLTERGVQV LSGGNELDGMHHINILQRPENYNSSKFVLKASKDLNIFVYFDGSDRFLKTLDGRNVGVQDGNFVILEPVSFKGYDNVSSE HTTIEIYETSILSPDFSKFVLDKLKPFVYVRELNKRVYLDDISKLSKGELLFLFYELFPISRLKGLQDWYDFGFSSILRE IKKVYDIRINARKRE >Mature_255_residues MCVWKMYMSRYFITILFFFIHGFIFGINLESVDFYRSLDKEELLFVIHLLEREKNLTQKNEFFTYIDLAKRVLTERGVQV LSGGNELDGMHHINILQRPENYNSSKFVLKASKDLNIFVYFDGSDRFLKTLDGRNVGVQDGNFVILEPVSFKGYDNVSSE HTTIEIYETSILSPDFSKFVLDKLKPFVYVRELNKRVYLDDISKLSKGELLFLFYELFPISRLKGLQDWYDFGFSSILRE IKKVYDIRINARKRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30185; Mature: 30185
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVWKMYMSRYFITILFFFIHGFIFGINLESVDFYRSLDKEELLFVIHLLEREKNLTQKN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH EFFTYIDLAKRVLTERGVQVLSGGNELDGMHHINILQRPENYNSSKFVLKASKDLNIFVY HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEE FDGSDRFLKTLDGRNVGVQDGNFVILEPVSFKGYDNVSSEHTTIEIYETSILSPDFSKFV ECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH LDKLKPFVYVRELNKRVYLDDISKLSKGELLFLFYELFPISRLKGLQDWYDFGFSSILRE HHHHHHHHHHHHHCCEEEHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHH IKKVYDIRINARKRE HHHHHHEEEECCCCC >Mature Secondary Structure MCVWKMYMSRYFITILFFFIHGFIFGINLESVDFYRSLDKEELLFVIHLLEREKNLTQKN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCCHHH EFFTYIDLAKRVLTERGVQVLSGGNELDGMHHINILQRPENYNSSKFVLKASKDLNIFVY HHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEE FDGSDRFLKTLDGRNVGVQDGNFVILEPVSFKGYDNVSSEHTTIEIYETSILSPDFSKFV ECCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHH LDKLKPFVYVRELNKRVYLDDISKLSKGELLFLFYELFPISRLKGLQDWYDFGFSSILRE HHHHHHHHHHHHHCCEEEHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHCHHHHHHH IKKVYDIRINARKRE HHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA