Definition | Borrelia hermsii DAH chromosome, complete genome. |
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Accession | NC_010673 |
Length | 922,307 |
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The map label for this gene is 187918389
Identifier: 187918389
GI number: 187918389
Start: 542192
End: 544003
Strand: Direct
Name: 187918389
Synonym: BH0526
Alternate gene names: NA
Gene position: 542192-544003 (Clockwise)
Preceding gene: 187918387
Following gene: 187918390
Centisome position: 58.79
GC content: 28.48
Gene sequence:
>1812_bases TTGAATGATATGAATAAATATTTGAGTTTAAGTTTTTTATACTTGCTAATTGGTATTTTGTTTTTATTTTTGGTTGTTTT TATGCAGTTTCGAGACTTAAGTTTAAATGTGTTTTTATTAAAGGATTTAAAATTTTTAGTTAATAATAAGGTTGAAGATA ATCAATATGTTTTAGATAATCTCACTCTTAGCGTAAGGGGTATTAAGATAAATTTGTCTAAGACAAAACCGCTTATTATT CCTGAAAATGGGCTTCATCTTTATCCCCTTTCTTACAAAGTGCAAGATAATGCTATTTACGTTTATTTTGAAAATAATAT TTTTTTACTCTTTTCATTTGATTCAAATAATAACTTTAATGTTAGTTCAAATCTTTCTAAAAAACTGCTAATGAGTTATG AAATTGAGAGTGATTATAAAATTTTATTTGATGATAATATTATTATTAAGGCTACAGATAGTCATTTTGAGGTTTCTTTG GGAAAGCATAGTCAGATGAATGAGAGAGAAATTTCAGTTAGTCCTCAAGAAGTTTTTCAGATCGGAGATTTGGTTGAAGG AGCTAAAACCTCAGATGAATTGATTTCTAGCAAATCGGATATTCCTTTAGATGTAAATTCTCCAGTTGTGTATTCATCGA TTAAGAAGGTAGGTAAAGAGGATTTTGACTCAGCATTGGTTAGATTTAGAGATAAAGCCTATGCTGCATGGAGCAACAAG TCACGATTTAGTGTTGAAAAGGGTGGATGGCGTAAGGGTAATGTATATTCTTTTGATGAGGATATATTTATTTATTTTTT GGCTGAGTCTTTAACAAGACCTGATTATGAAGCTCTATTTTTGAAGCTTAAATCTTTAATAAGCCTTAATGAAGAGCATT TAACGTATTTAAGTGCAAGTTACTATGTTGATGCAGACAAACTTGATAAGTTTTTTCGATATTTATCTGTAAATAAAACT TTTATTAATTCTCTTGAATCGGATAAGCTTTTGAAATATTTAAAAGAAGATGCGTATCTTTTAGAGAAGATTTTTTTATC TGAGAATGTTTCTATTTTAAATGTTGCCTTAAAGATTTTAAGGGAGCCAGAAGTAATATTGACTTCTGGATTTAATTTAA TCCAAGCTTATAATGTTCTCTCTAATTATATTATCTTCTTGCAATTTGATAATGATCGTTTTGTGCTTGGTAAGCTTAAA GAAGAATTAACTAAATTTGTATCTACTTTATTTTCTGTAACTAGTAATGGAGAAGCGTATGTTCCTGGGAATAGGAGTAA TGTATCTTGGGATTTTGAATATACACTTAAGATTGCGGGTTTACTTAAAAGACTTGCTTCCCAATTAGGTAATGATTTAA TCTTGGAGTTTGTTTGTAATGCTATTTATTATTCTTTACTTAAGCCTGATATCGAGAAGATTCCTTATGAAAATTATTAT GCTGATATTGTTGATAATGATTATATTCCGAGATTTAGGTTGTTGTCAAATCTTGGAGTTGGACATTGGATATATGGCGC AACAAAGATTATAAATTTTAATCTTTCTAATGCGTTTTATTCTATTGATTTTGATCGTGTTTTAAATTCCCCTGGGTATT TCTTTTTTAAAGGTATTTCGAATCCTACCTTGGTTAGGTTTAGAAATATTAATTGGTTTACAGATCCTCAGTTTTACATG TATTCTGATGGATGGAGATATTATTCTGATAATAAGATATTGGTTTTAAAAATAACCCCTAAGAAATCTGATGATACAAA GATTCTCTTAAGATTTGATGATATAAAGGCATTTGAGAATATTGATGAATAA
Upstream 100 bases:
>100_bases TTACTCCTATTTGTATTGATCGCATATACTTTGATTAATTTTATTAAGTTTTTTGCTTTTATACAACCGATATTGATATT TTAATTCTTTATTATTAATA
Downstream 100 bases:
>100_bases ATTTGTTGGTGCAGTTCAGTTAATCATTGATATTGGAAACACAAGTATATCTTTTGCATTGTATAGACTGGACAAAATGC AGATATATTGCAAGCTTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 603; Mature: 603
Protein sequence:
>603_residues MNDMNKYLSLSFLYLLIGILFLFLVVFMQFRDLSLNVFLLKDLKFLVNNKVEDNQYVLDNLTLSVRGIKINLSKTKPLII PENGLHLYPLSYKVQDNAIYVYFENNIFLLFSFDSNNNFNVSSNLSKKLLMSYEIESDYKILFDDNIIIKATDSHFEVSL GKHSQMNEREISVSPQEVFQIGDLVEGAKTSDELISSKSDIPLDVNSPVVYSSIKKVGKEDFDSALVRFRDKAYAAWSNK SRFSVEKGGWRKGNVYSFDEDIFIYFLAESLTRPDYEALFLKLKSLISLNEEHLTYLSASYYVDADKLDKFFRYLSVNKT FINSLESDKLLKYLKEDAYLLEKIFLSENVSILNVALKILREPEVILTSGFNLIQAYNVLSNYIIFLQFDNDRFVLGKLK EELTKFVSTLFSVTSNGEAYVPGNRSNVSWDFEYTLKIAGLLKRLASQLGNDLILEFVCNAIYYSLLKPDIEKIPYENYY ADIVDNDYIPRFRLLSNLGVGHWIYGATKIINFNLSNAFYSIDFDRVLNSPGYFFFKGISNPTLVRFRNINWFTDPQFYM YSDGWRYYSDNKILVLKITPKKSDDTKILLRFDDIKAFENIDE
Sequences:
>Translated_603_residues MNDMNKYLSLSFLYLLIGILFLFLVVFMQFRDLSLNVFLLKDLKFLVNNKVEDNQYVLDNLTLSVRGIKINLSKTKPLII PENGLHLYPLSYKVQDNAIYVYFENNIFLLFSFDSNNNFNVSSNLSKKLLMSYEIESDYKILFDDNIIIKATDSHFEVSL GKHSQMNEREISVSPQEVFQIGDLVEGAKTSDELISSKSDIPLDVNSPVVYSSIKKVGKEDFDSALVRFRDKAYAAWSNK SRFSVEKGGWRKGNVYSFDEDIFIYFLAESLTRPDYEALFLKLKSLISLNEEHLTYLSASYYVDADKLDKFFRYLSVNKT FINSLESDKLLKYLKEDAYLLEKIFLSENVSILNVALKILREPEVILTSGFNLIQAYNVLSNYIIFLQFDNDRFVLGKLK EELTKFVSTLFSVTSNGEAYVPGNRSNVSWDFEYTLKIAGLLKRLASQLGNDLILEFVCNAIYYSLLKPDIEKIPYENYY ADIVDNDYIPRFRLLSNLGVGHWIYGATKIINFNLSNAFYSIDFDRVLNSPGYFFFKGISNPTLVRFRNINWFTDPQFYM YSDGWRYYSDNKILVLKITPKKSDDTKILLRFDDIKAFENIDE >Mature_603_residues MNDMNKYLSLSFLYLLIGILFLFLVVFMQFRDLSLNVFLLKDLKFLVNNKVEDNQYVLDNLTLSVRGIKINLSKTKPLII PENGLHLYPLSYKVQDNAIYVYFENNIFLLFSFDSNNNFNVSSNLSKKLLMSYEIESDYKILFDDNIIIKATDSHFEVSL GKHSQMNEREISVSPQEVFQIGDLVEGAKTSDELISSKSDIPLDVNSPVVYSSIKKVGKEDFDSALVRFRDKAYAAWSNK SRFSVEKGGWRKGNVYSFDEDIFIYFLAESLTRPDYEALFLKLKSLISLNEEHLTYLSASYYVDADKLDKFFRYLSVNKT FINSLESDKLLKYLKEDAYLLEKIFLSENVSILNVALKILREPEVILTSGFNLIQAYNVLSNYIIFLQFDNDRFVLGKLK EELTKFVSTLFSVTSNGEAYVPGNRSNVSWDFEYTLKIAGLLKRLASQLGNDLILEFVCNAIYYSLLKPDIEKIPYENYY ADIVDNDYIPRFRLLSNLGVGHWIYGATKIINFNLSNAFYSIDFDRVLNSPGYFFFKGISNPTLVRFRNINWFTDPQFYM YSDGWRYYSDNKILVLKITPKKSDDTKILLRFDDIKAFENIDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70057; Mature: 70057
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDMNKYLSLSFLYLLIGILFLFLVVFMQFRDLSLNVFLLKDLKFLVNNKVEDNQYVLDN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEEEEC LTLSVRGIKINLSKTKPLIIPENGLHLYPLSYKVQDNAIYVYFENNIFLLFSFDSNNNFN EEEEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCEEEEEEECCEEEEEEECCCCCEE VSSNLSKKLLMSYEIESDYKILFDDNIIIKATDSHFEVSLGKHSQMNEREISVSPQEVFQ ECCCCCHHEEEEEEECCCCEEEEECCEEEEECCCCEEEEECCCCCCCCCEECCCHHHHHH IGDLVEGAKTSDELISSKSDIPLDVNSPVVYSSIKKVGKEDFDSALVRFRDKAYAAWSNK HHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEECCC SRFSVEKGGWRKGNVYSFDEDIFIYFLAESLTRPDYEALFLKLKSLISLNEEHLTYLSAS CCEEECCCCCCCCCEEEECCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHEEEEEE YYVDADKLDKFFRYLSVNKTFINSLESDKLLKYLKEDAYLLEKIFLSENVSILNVALKIL EEECHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH REPEVILTSGFNLIQAYNVLSNYIIFLQFDNDRFVLGKLKEELTKFVSTLFSVTSNGEAY CCCCEEEECCCHHHHHHHHHCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE VPGNRSNVSWDFEYTLKIAGLLKRLASQLGNDLILEFVCNAIYYSLLKPDIEKIPYENYY ECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEE ADIVDNDYIPRFRLLSNLGVGHWIYGATKIINFNLSNAFYSIDFDRVLNSPGYFFFKGIS EECCCCCCCCHHHHHHHCCCCCEEECCEEEEEEEECCEEEEEEHHHHHCCCCEEEEECCC NPTLVRFRNINWFTDPQFYMYSDGWRYYSDNKILVLKITPKKSDDTKILLRFDDIKAFEN CCEEEEEECCCEEECCCEEEEECCEEEECCCEEEEEEECCCCCCCCEEEEEEECHHHHCC IDE CCC >Mature Secondary Structure MNDMNKYLSLSFLYLLIGILFLFLVVFMQFRDLSLNVFLLKDLKFLVNNKVEDNQYVLDN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCEEEEEC LTLSVRGIKINLSKTKPLIIPENGLHLYPLSYKVQDNAIYVYFENNIFLLFSFDSNNNFN EEEEEEEEEEEECCCCCEEECCCCCEEEEEEEEEECCEEEEEEECCEEEEEEECCCCCEE VSSNLSKKLLMSYEIESDYKILFDDNIIIKATDSHFEVSLGKHSQMNEREISVSPQEVFQ ECCCCCHHEEEEEEECCCCEEEEECCEEEEECCCCEEEEECCCCCCCCCEECCCHHHHHH IGDLVEGAKTSDELISSKSDIPLDVNSPVVYSSIKKVGKEDFDSALVRFRDKAYAAWSNK HHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHEEEECCC SRFSVEKGGWRKGNVYSFDEDIFIYFLAESLTRPDYEALFLKLKSLISLNEEHLTYLSAS CCEEECCCCCCCCCEEEECCCEEEEEEEHHHCCCCHHHHHHHHHHHHCCCHHHHEEEEEE YYVDADKLDKFFRYLSVNKTFINSLESDKLLKYLKEDAYLLEKIFLSENVSILNVALKIL EEECHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH REPEVILTSGFNLIQAYNVLSNYIIFLQFDNDRFVLGKLKEELTKFVSTLFSVTSNGEAY CCCCEEEECCCHHHHHHHHHCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE VPGNRSNVSWDFEYTLKIAGLLKRLASQLGNDLILEFVCNAIYYSLLKPDIEKIPYENYY ECCCCCCEEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCEE ADIVDNDYIPRFRLLSNLGVGHWIYGATKIINFNLSNAFYSIDFDRVLNSPGYFFFKGIS EECCCCCCCCHHHHHHHCCCCCEEECCEEEEEEEECCEEEEEEHHHHHCCCCEEEEECCC NPTLVRFRNINWFTDPQFYMYSDGWRYYSDNKILVLKITPKKSDDTKILLRFDDIKAFEN CCEEEEEECCCEEECCCEEEEECCEEEECCCEEEEEEECCCCCCCCEEEEEEECHHHHCC IDE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA