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The map label for this gene is ymdB [H]

Identifier: 187918338

GI number: 187918338

Start: 495520

End: 496341

Strand: Direct

Name: ymdB [H]

Synonym: BH0471

Alternate gene names: 187918338

Gene position: 495520-496341 (Clockwise)

Preceding gene: 187918337

Following gene: 187918339

Centisome position: 53.73

GC content: 31.02

Gene sequence:

>822_bases
TTGGTGAGTTTGCGGATTTTAGTTGCTGGGGAAGTTATAGGCAAGCCTGGCATTATTGTGATGAAGAATTTTTTGTCTTC
TTTTAAACAAAGAAATGGCATTGATTTTGTGATATCTGGTAATAATTTTACTACAGGGTTTCGAGGCCTGTGTAAAAGAC
ATGCATTTTTGCTAAAAAAGTATGGTATTGATGTTTTGACTTTAGGAGAAAATGCGTTTGTAAGAGCTGGACTTAGCGAT
GAACTTGATAAATATAATTTTATTTTAAAACCTTTAAATTGTCCTGCCAAATTAAAAGGTTATTCTTATTTTATTTACAA
TGTTAATGGCAGTAAGGTTGCCGTAATTAGACTTGTTGGACAGACAGGAATTACAAAATATAATTTTAATAATCCTTTTT
TTGCTTTTGATTATTTTTACGAAAAAATTAAGTTGCATACTAATAATATAATTGTACTCTTTGATTCAAATACTACTGCT
GAGGTTAATGCCATGTTTTTTTATCTAAAATCTAGAGTTAGTGCTTGTCTGGGTATTGGGAAGAGAATATTAACAGCAGA
TCTTAGAATTTTTGATCATACTGCAGTTATTACTGATCTTGGTAGAGTTGGCAGTTTAAATAGTGTTATTGGATACGCAC
CTAAATTTGAGATAGATAAATTCTTACGAGGTTTTTTAAATAATCGATTTACTGAATCTTGGGATGGGCTTGGTTTTAAT
GGTGTTATAGTTGAGATTAATGATGGGAAAGCTGTGATGGTTGAAGTTGTAAGGGAATACATCGATTTTGATGCTAGTCT
TGAGAATAGTAATAACGTTTAA

Upstream 100 bases:

>100_bases
TGATTATTATTTCAATTGTGGTAAGCTATTTTGTATCAAATATTTTTTTTAAAAATATTATTTCTAAGTTTTTTAATCTG
GATAAATAAAGAGAGAGGCT

Downstream 100 bases:

>100_bases
AACGACACCTTTAATTTTCTAAAATGTGTTTTATTGATGCAAGCTTTGTTTAGTTTGGAGGTAATAATGTATAGCTATCT
TTTAGAGGGTGGTTTTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MVSLRILVAGEVIGKPGIIVMKNFLSSFKQRNGIDFVISGNNFTTGFRGLCKRHAFLLKKYGIDVLTLGENAFVRAGLSD
ELDKYNFILKPLNCPAKLKGYSYFIYNVNGSKVAVIRLVGQTGITKYNFNNPFFAFDYFYEKIKLHTNNIIVLFDSNTTA
EVNAMFFYLKSRVSACLGIGKRILTADLRIFDHTAVITDLGRVGSLNSVIGYAPKFEIDKFLRGFLNNRFTESWDGLGFN
GVIVEINDGKAVMVEVVREYIDFDASLENSNNV

Sequences:

>Translated_273_residues
MVSLRILVAGEVIGKPGIIVMKNFLSSFKQRNGIDFVISGNNFTTGFRGLCKRHAFLLKKYGIDVLTLGENAFVRAGLSD
ELDKYNFILKPLNCPAKLKGYSYFIYNVNGSKVAVIRLVGQTGITKYNFNNPFFAFDYFYEKIKLHTNNIIVLFDSNTTA
EVNAMFFYLKSRVSACLGIGKRILTADLRIFDHTAVITDLGRVGSLNSVIGYAPKFEIDKFLRGFLNNRFTESWDGLGFN
GVIVEINDGKAVMVEVVREYIDFDASLENSNNV
>Mature_273_residues
MVSLRILVAGEVIGKPGIIVMKNFLSSFKQRNGIDFVISGNNFTTGFRGLCKRHAFLLKKYGIDVLTLGENAFVRAGLSD
ELDKYNFILKPLNCPAKLKGYSYFIYNVNGSKVAVIRLVGQTGITKYNFNNPFFAFDYFYEKIKLHTNNIIVLFDSNTTA
EVNAMFFYLKSRVSACLGIGKRILTADLRIFDHTAVITDLGRVGSLNSVIGYAPKFEIDKFLRGFLNNRFTESWDGLGFN
GVIVEINDGKAVMVEVVREYIDFDASLENSNNV

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30634; Mature: 30634

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSLRILVAGEVIGKPGIIVMKNFLSSFKQRNGIDFVISGNNFTTGFRGLCKRHAFLLKK
CEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
YGIDVLTLGENAFVRAGLSDELDKYNFILKPLNCPAKLKGYSYFIYNVNGSKVAVIRLVG
HCCEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCEECCEEEEEEEECCCEEEEEEEEC
QTGITKYNFNNPFFAFDYFYEKIKLHTNNIIVLFDSNTTAEVNAMFFYLKSRVSACLGIG
CCCCEEEECCCCEEEHHHHEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
KRILTADLRIFDHTAVITDLGRVGSLNSVIGYAPKFEIDKFLRGFLNNRFTESWDGLGFN
HHHHHHHEEEEEHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVIVEINDGKAVMVEVVREYIDFDASLENSNNV
EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVSLRILVAGEVIGKPGIIVMKNFLSSFKQRNGIDFVISGNNFTTGFRGLCKRHAFLLKK
CEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHH
YGIDVLTLGENAFVRAGLSDELDKYNFILKPLNCPAKLKGYSYFIYNVNGSKVAVIRLVG
HCCEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCEECCEEEEEEEECCCEEEEEEEEC
QTGITKYNFNNPFFAFDYFYEKIKLHTNNIIVLFDSNTTAEVNAMFFYLKSRVSACLGIG
CCCCEEEECCCCEEEHHHHEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCC
KRILTADLRIFDHTAVITDLGRVGSLNSVIGYAPKFEIDKFLRGFLNNRFTESWDGLGFN
HHHHHHHEEEEEHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
GVIVEINDGKAVMVEVVREYIDFDASLENSNNV
EEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]