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The map label for this gene is recJ [H]

Identifier: 187918128

GI number: 187918128

Start: 266521

End: 268635

Strand: Direct

Name: recJ [H]

Synonym: BH0254

Alternate gene names: 187918128

Gene position: 266521-268635 (Clockwise)

Preceding gene: 187918127

Following gene: 187918129

Centisome position: 28.9

GC content: 26.95

Gene sequence:

>2115_bases
ATGAAAATTTGGAAAAAAAAAGAAATTGATATCCCAAAAGAAAATGTAGTCAATATCGCAAAAAAATATAACATTAGCCT
TCTTGAAGCAACACTACTACTTAGAAGAGAAATTAAAGAAGAAGATTTTCTATTTTTTATTGAAAGTAGTGTAAATTTAA
TGCACAATCCATTTTTATTAAAAAACATAGACAAATTCACTTATAGAATGAATGAAGCTATTGCGGAGAAGGAAAATGTA
TTAATATTTGGAGATAAGGATGCTGACGGTATCACAGCTACAATCATAATGTATGAAACTCTTAAAGATTTTGGAATAAA
TGTAACCTATAAGATACCCTCCAATGGGGAATTTTACGGTCTTACAAAAGAGATCATTGATAAGGCATTTGAAGATAAAA
TCTCAATAATAATTACTGTTGATTGTGGAATTTCCAATATTGAAGAAGCAAACTATGCAAGATCAAAAAACATAGAAGTA
ATAATTACAGATCATCATCTTCCAAACAAAGAAATTGACATAGAAAATATCATTATTGATCCTCATTTAAAAGGAGATCC
CTCTCCATTTAAAGAAATAGCTGGATGTTACGTAAGTTTTAAAGCATGTCTTGCATTATACCTATCCACTACCAATCTTT
ATAATAAAAACATGGTATTTTTATTTCTAGAAAGATTAAATAATAACATTACACTTCATGCAATAGAAATAAACAACTAC
ATGTTTAAAAAGTACATCGCCCTCGAAAGCAATAATGACTTGCAAATCAATATTAATAAGCTAGAAGAATTCTCAAAAAG
TAAATACGTAATTGTATTTAATAAAAATGAACAAAATCAACTCCTAAATGAGTTCTTTAATTATAAAATAGATATCGAAA
CAATTGATATTAGTGAAAATTTTGTAAAAAAATATCCTAAATTTGCCAAAAAAACACTAAAAGAACTAATGCAAATTACC
AAATATTGTAAATATAGAAAAACTGATACTAAAGAAAAACTATATTACGTATTTTACAACATAATATTTGAAGTAAATAA
AGATTTACTAAAAAACTGTCTTAAAAGACTTAAATTTGTCGCAATAGGAACCATTGCTGATAATATGCCAATTATTAATG
AAAATCGAATAGTTGTAAAAGAAGGACTTAAAGAAATCGCACTAAGAGAAAACATATCCATTAATTACCTATTAAAAGAA
GTTAATATACTAACAAAACCAATCATCACTTCAACAGATATTGCATTTAAAGTCGCTCCAATATTAAATTCAACAGGCAG
ACTTGAGAAAGCAGATATTACAATTCAATTTTTATTAGCCGAAGATACTAATCAGATAGAAAATAAGTTTAAAGAAATCA
AAAACATAAATACTTTAAGAAAACGCAAGGAAGAAGCATCTTGGATTGCACATGATGAGAATACCATTTTCAAAAATGAT
AAATTCATAGTATGTTACGACAAACAAACTCCAAAAGGAATTAGTTCTCGAATGGCAACAAGACTTTCCGCTTATTATCA
AAAAGTTGCCGTTTTCCTAACAAAACAAGAAAATATCATTAAAGGCTCCATAAGATCAAACAATAAAGTAAATTCAAAAG
AATTAATTTCAATGATACCAAGTCATTTAATAATAAATTCTGGGGGACACAAAGCTGCTGCTGGATTTACACTCTATGAG
GCTGTATTAAATGAATTCATAAAAGAACTTGAAAACGCTCTTGACAAAATAGAATACAAAGAAATACATGAAGATTCAAT
ACTAATCGATGCAATTATACCTAAAGACTTCAATAAGAGAGAACTTTTAAAAATAATAGACTTATTTGAACCTTACGGAC
ATGGTTTTAGAGAATTTATTCTAATGATGGAAGATATATACATTCAAGATCTAAGAACAATTGACAAAAATGGAACTTCA
AAACATATAAGCATGAAAATCAAAAATAATAAAGATTATTATAGGGCTATTTACTTTAATGGCACTCAAAAAATCCAAGA
ACTTGGTATTAAAGATGGCCAAAATATAGACATAATATTCACAGTTGGTGAAGACCTTTACAATCAAAACGACAAAATTT
TAAAAATTATTGATATCAAAAAGAGAAAAAATTAG

Upstream 100 bases:

>100_bases
ACTAGTAAGTCAAAAGAACTTATTAAAGTTATGATCAAAAATAAGATCAATACAGAATTTGAACAAACATTACTCTAAAT
AAAGCAAACTGGAATAAAAC

Downstream 100 bases:

>100_bases
TGCTTAATATTAAAAGCCTTTTATTTATATTGATAACAGGATTATTTAAGATAAATGCAGTAAATAATGATATCATAAAA
ATTTACTATAAAAAAGAAGC

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 704; Mature: 704

Protein sequence:

>704_residues
MKIWKKKEIDIPKENVVNIAKKYNISLLEATLLLRREIKEEDFLFFIESSVNLMHNPFLLKNIDKFTYRMNEAIAEKENV
LIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYGLTKEIIDKAFEDKISIIITVDCGISNIEEANYARSKNIEV
IITDHHLPNKEIDIENIIIDPHLKGDPSPFKEIAGCYVSFKACLALYLSTTNLYNKNMVFLFLERLNNNITLHAIEINNY
MFKKYIALESNNDLQININKLEEFSKSKYVIVFNKNEQNQLLNEFFNYKIDIETIDISENFVKKYPKFAKKTLKELMQIT
KYCKYRKTDTKEKLYYVFYNIIFEVNKDLLKNCLKRLKFVAIGTIADNMPIINENRIVVKEGLKEIALRENISINYLLKE
VNILTKPIITSTDIAFKVAPILNSTGRLEKADITIQFLLAEDTNQIENKFKEIKNINTLRKRKEEASWIAHDENTIFKND
KFIVCYDKQTPKGISSRMATRLSAYYQKVAVFLTKQENIIKGSIRSNNKVNSKELISMIPSHLIINSGGHKAAAGFTLYE
AVLNEFIKELENALDKIEYKEIHEDSILIDAIIPKDFNKRELLKIIDLFEPYGHGFREFILMMEDIYIQDLRTIDKNGTS
KHISMKIKNNKDYYRAIYFNGTQKIQELGIKDGQNIDIIFTVGEDLYNQNDKILKIIDIKKRKN

Sequences:

>Translated_704_residues
MKIWKKKEIDIPKENVVNIAKKYNISLLEATLLLRREIKEEDFLFFIESSVNLMHNPFLLKNIDKFTYRMNEAIAEKENV
LIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYGLTKEIIDKAFEDKISIIITVDCGISNIEEANYARSKNIEV
IITDHHLPNKEIDIENIIIDPHLKGDPSPFKEIAGCYVSFKACLALYLSTTNLYNKNMVFLFLERLNNNITLHAIEINNY
MFKKYIALESNNDLQININKLEEFSKSKYVIVFNKNEQNQLLNEFFNYKIDIETIDISENFVKKYPKFAKKTLKELMQIT
KYCKYRKTDTKEKLYYVFYNIIFEVNKDLLKNCLKRLKFVAIGTIADNMPIINENRIVVKEGLKEIALRENISINYLLKE
VNILTKPIITSTDIAFKVAPILNSTGRLEKADITIQFLLAEDTNQIENKFKEIKNINTLRKRKEEASWIAHDENTIFKND
KFIVCYDKQTPKGISSRMATRLSAYYQKVAVFLTKQENIIKGSIRSNNKVNSKELISMIPSHLIINSGGHKAAAGFTLYE
AVLNEFIKELENALDKIEYKEIHEDSILIDAIIPKDFNKRELLKIIDLFEPYGHGFREFILMMEDIYIQDLRTIDKNGTS
KHISMKIKNNKDYYRAIYFNGTQKIQELGIKDGQNIDIIFTVGEDLYNQNDKILKIIDIKKRKN
>Mature_704_residues
MKIWKKKEIDIPKENVVNIAKKYNISLLEATLLLRREIKEEDFLFFIESSVNLMHNPFLLKNIDKFTYRMNEAIAEKENV
LIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYGLTKEIIDKAFEDKISIIITVDCGISNIEEANYARSKNIEV
IITDHHLPNKEIDIENIIIDPHLKGDPSPFKEIAGCYVSFKACLALYLSTTNLYNKNMVFLFLERLNNNITLHAIEINNY
MFKKYIALESNNDLQININKLEEFSKSKYVIVFNKNEQNQLLNEFFNYKIDIETIDISENFVKKYPKFAKKTLKELMQIT
KYCKYRKTDTKEKLYYVFYNIIFEVNKDLLKNCLKRLKFVAIGTIADNMPIINENRIVVKEGLKEIALRENISINYLLKE
VNILTKPIITSTDIAFKVAPILNSTGRLEKADITIQFLLAEDTNQIENKFKEIKNINTLRKRKEEASWIAHDENTIFKND
KFIVCYDKQTPKGISSRMATRLSAYYQKVAVFLTKQENIIKGSIRSNNKVNSKELISMIPSHLIINSGGHKAAAGFTLYE
AVLNEFIKELENALDKIEYKEIHEDSILIDAIIPKDFNKRELLKIIDLFEPYGHGFREFILMMEDIYIQDLRTIDKNGTS
KHISMKIKNNKDYYRAIYFNGTQKIQELGIKDGQNIDIIFTVGEDLYNQNDKILKIIDIKKRKN

Specific function: Putative single-stranded-DNA-specific exonuclease. RecA thread formation during DNA double-strand break repair requires RecJ or AadAB [H]

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OB DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=162, Percent_Identity=36.4197530864198, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610
- InterPro:   IPR018779 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF10141 ssDNA-exonuc_C [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 81983; Mature: 81983

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIWKKKEIDIPKENVVNIAKKYNISLLEATLLLRREIKEEDFLFFIESSVNLMHNPFLL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCCHHH
KNIDKFTYRMNEAIAEKENVLIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEHHHHCCCEEEEEECCCCCEEE
LTKEIIDKAFEDKISIIITVDCGISNIEEANYARSKNIEVIITDHHLPNKEIDIENIIID
CHHHHHHHHHCCCEEEEEEEECCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCEEEEEEC
PHLKGDPSPFKEIAGCYVSFKACLALYLSTTNLYNKNMVFLFLERLNNNITLHAIEINNY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCEEEEEEEECCE
MFKKYIALESNNDLQININKLEEFSKSKYVIVFNKNEQNQLLNEFFNYKIDIETIDISEN
EEEEEEEEECCCCEEEEHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEEEEEEECCHH
FVKKYPKFAKKTLKELMQITKYCKYRKTDTKEKLYYVFYNIIFEVNKDLLKNCLKRLKFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHEE
AIGTIADNMPIINENRIVVKEGLKEIALRENISINYLLKEVNILTKPIITSTDIAFKVAP
EEEEECCCCCEECCCEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEECCCCEEEEEH
ILNSTGRLEKADITIQFLLAEDTNQIENKFKEIKNINTLRKRKEEASWIAHDENTIFKND
HHCCCCCEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECC
KFIVCYDKQTPKGISSRMATRLSAYYQKVAVFLTKQENIIKGSIRSNNKVNSKELISMIP
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCHHHHHHHCC
SHLIINSGGHKAAAGFTLYEAVLNEFIKELENALDKIEYKEIHEDSILIDAIIPKDFNKR
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCCCHH
ELLKIIDLFEPYGHGFREFILMMEDIYIQDLRTIDKNGTSKHISMKIKNNKDYYRAIYFN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC
GTQKIQELGIKDGQNIDIIFTVGEDLYNQNDKILKIIDIKKRKN
CHHHHHHCCCCCCCCEEEEEEECHHHHCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MKIWKKKEIDIPKENVVNIAKKYNISLLEATLLLRREIKEEDFLFFIESSVNLMHNPFLL
CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHCCCHHH
KNIDKFTYRMNEAIAEKENVLIFGDKDADGITATIIMYETLKDFGINVTYKIPSNGEFYG
HHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEHHHHCCCEEEEEECCCCCEEE
LTKEIIDKAFEDKISIIITVDCGISNIEEANYARSKNIEVIITDHHLPNKEIDIENIIID
CHHHHHHHHHCCCEEEEEEEECCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCEEEEEEC
PHLKGDPSPFKEIAGCYVSFKACLALYLSTTNLYNKNMVFLFLERLNNNITLHAIEINNY
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHCCCEEEEEEEECCE
MFKKYIALESNNDLQININKLEEFSKSKYVIVFNKNEQNQLLNEFFNYKIDIETIDISEN
EEEEEEEEECCCCEEEEHHHHHHCCCCCEEEEECCCCHHHHHHHHCCEEEEEEEEECCHH
FVKKYPKFAKKTLKELMQITKYCKYRKTDTKEKLYYVFYNIIFEVNKDLLKNCLKRLKFV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHEE
AIGTIADNMPIINENRIVVKEGLKEIALRENISINYLLKEVNILTKPIITSTDIAFKVAP
EEEEECCCCCEECCCEEEHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCEECCCCEEEEEH
ILNSTGRLEKADITIQFLLAEDTNQIENKFKEIKNINTLRKRKEEASWIAHDENTIFKND
HHCCCCCEEECCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEECC
KFIVCYDKQTPKGISSRMATRLSAYYQKVAVFLTKQENIIKGSIRSNNKVNSKELISMIP
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCCHHHHHHHCC
SHLIINSGGHKAAAGFTLYEAVLNEFIKELENALDKIEYKEIHEDSILIDAIIPKDFNKR
CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCCCCHH
ELLKIIDLFEPYGHGFREFILMMEDIYIQDLRTIDKNGTSKHISMKIKNNKDYYRAIYFN
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEC
GTQKIQELGIKDGQNIDIIFTVGEDLYNQNDKILKIIDIKKRKN
CHHHHHHCCCCCCCCEEEEEEECHHHHCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]