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The map label for this gene is pepF [H]

Identifier: 187918121

GI number: 187918121

Start: 255061

End: 256830

Strand: Direct

Name: pepF [H]

Synonym: BH0248

Alternate gene names: 187918121

Gene position: 255061-256830 (Clockwise)

Preceding gene: 187918120

Following gene: 187918122

Centisome position: 27.65

GC content: 28.47

Gene sequence:

>1770_bases
GTGATAGAGAGAAGCAAAATCAATGAAAATGACAAGTGGGACTTATCTTCTCTGTTTAAAAACAATGAAGAATATAGAGA
AACGGTCAAAAAAATAAAATTAAAACTTCAAGACTTCAAAAAATATGAAAAACTAGAATTTGATCTAAACATTTTTAAGC
AAGCATTAAATGATTACTATGAAATTGAAGAAGAGCTTGAGAGAACAGTATATTACACACACATTCAACTAGAAACAGAT
GTAAGCAATCAAACCTCAAACGAACTTCGCACAATTAATGTTAATTTAGAAACAGAAGCATCAAATGCCACTTCATTTTT
TATTCCAAAAATTTTAAAAACAGATACAAAACAAGTAAGAGAATGGCTTAAGGACATAGAACTTAAAGATAAAAAAATAG
CTATTGAAAAAATCTTAAGAGAAAAAGAACATATCTTAAGCGAAGATGAAGAGAAAATACTAGCAAACTATACATCTCTT
TATTCATCTTATAATGATATATTCTCTGTATTAACAAATGCTGACATGGATTTTGGAGAAATTGATGGTAAGTCATTAAG
TAACGCCACTTACAATCTATTTCTTCAAAATGAAAATCAAGAAATACGAAGAAAAGCTTTCTTAAAATTTTATCAAGAAT
ATAAAAAACATGAAAATACATTAGCCAACACCTTAATTGCCGATATGAATAAAAATAAATTTTTGGCAAAAACAAGAAAA
TTTGAAGATACTATTTCAATGAAACTTTTCCAAAACAATATTGATAAGAAGGTTTACACAAACTTAATTGAAACGGTTAA
CGAAAATTTATCTGTACTTCATGAATATTACGAATTTAGGAAAAGCATACTTAACCAAGAATATCTTAATCACTATGATG
TTTATGTTCCTTTAACAAAAGACATTAAATTCAAAAATTCTTTTAAAGAAGCTTGTGATCAAATTTTAAAATCACTAGAA
ATACTAGGAAATGAATATACTGAAGTACTCAGAAAAGGACTCTTAGAAGAACGTTGGGTTGACAAATATGAAAATAAAGG
CAAAAGAGCAGGGGCTTTTAGTGCAGGATCATACAATGGAAAACCTTATATACTAATGAATTACAAAGATGAATCAATAA
GAGATATGTTCACCCTGGCTCATGAGGCAGGACACTCCATGCATTCCTACTTTAGTATCAAGAATAATCCATTTCCGCAA
TATCAATATTCTATTTTTGAAGCAGAAATAGCATCCACAGTAAATGAGCAAATACTTGCAGAATATTTACTAAAGAATGA
AAATGATATCGAAAAAATAAAATACATTAAACTAAACCAAATCGATGACTTACTTGCGACATTTTTCAGGCAAACAATGT
TTGCCGAATTTGAATATATCATTCATGGCATGATCAATAAAGATCAGCCAGTGGTAAAAGAAACAATCAAGACAACCTAT
TTAAATTTACTCAAAAAATATTTTGGCCCAAGTCTTAAGTTTGATGAAAACAGTTCACTAGAATGTCTTAGAGTTCCTCA
TTTCTACTCGCCATTTTACGTATATCAATACGCAACAGGAATCACAGCTGCTCTTTTAATATATAAAAACATAAAAGATA
ATAAAAAAGATGCCACTAAAGATTACATAGAATTTTTAAAAACAGGGGGCTCAAAATATCCCTTGGAATCTTTAAAAGTT
ACTGGTGTCGACTTAAGTTTAAAATCAACAATAAAAAATACAATTAACATCTTTAAAGAACGTCTTGAGGATGTAAAAAA
ACTATTTTAA

Upstream 100 bases:

>100_bases
AGTTTTCAATTCAATTGTAAAATTGCACGTAAAGATTTAAAATAATTATTATTCATAATAATAATAATTAGTGTCATATT
AAATTCAAGGAGAAAGTTTA

Downstream 100 bases:

>100_bases
TAAAGGAGTAAACCTTGGGGAAATTAAATCTTATTTTAGCCTGGTCAGTGCATATTTTAACAGCTTCCGGACTAATAATT
GGTCTTTACTCAATAATCTC

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MIERSKINENDKWDLSSLFKNNEEYRETVKKIKLKLQDFKKYEKLEFDLNIFKQALNDYYEIEEELERTVYYTHIQLETD
VSNQTSNELRTINVNLETEASNATSFFIPKILKTDTKQVREWLKDIELKDKKIAIEKILREKEHILSEDEEKILANYTSL
YSSYNDIFSVLTNADMDFGEIDGKSLSNATYNLFLQNENQEIRRKAFLKFYQEYKKHENTLANTLIADMNKNKFLAKTRK
FEDTISMKLFQNNIDKKVYTNLIETVNENLSVLHEYYEFRKSILNQEYLNHYDVYVPLTKDIKFKNSFKEACDQILKSLE
ILGNEYTEVLRKGLLEERWVDKYENKGKRAGAFSAGSYNGKPYILMNYKDESIRDMFTLAHEAGHSMHSYFSIKNNPFPQ
YQYSIFEAEIASTVNEQILAEYLLKNENDIEKIKYIKLNQIDDLLATFFRQTMFAEFEYIIHGMINKDQPVVKETIKTTY
LNLLKKYFGPSLKFDENSSLECLRVPHFYSPFYVYQYATGITAALLIYKNIKDNKKDATKDYIEFLKTGGSKYPLESLKV
TGVDLSLKSTIKNTINIFKERLEDVKKLF

Sequences:

>Translated_589_residues
MIERSKINENDKWDLSSLFKNNEEYRETVKKIKLKLQDFKKYEKLEFDLNIFKQALNDYYEIEEELERTVYYTHIQLETD
VSNQTSNELRTINVNLETEASNATSFFIPKILKTDTKQVREWLKDIELKDKKIAIEKILREKEHILSEDEEKILANYTSL
YSSYNDIFSVLTNADMDFGEIDGKSLSNATYNLFLQNENQEIRRKAFLKFYQEYKKHENTLANTLIADMNKNKFLAKTRK
FEDTISMKLFQNNIDKKVYTNLIETVNENLSVLHEYYEFRKSILNQEYLNHYDVYVPLTKDIKFKNSFKEACDQILKSLE
ILGNEYTEVLRKGLLEERWVDKYENKGKRAGAFSAGSYNGKPYILMNYKDESIRDMFTLAHEAGHSMHSYFSIKNNPFPQ
YQYSIFEAEIASTVNEQILAEYLLKNENDIEKIKYIKLNQIDDLLATFFRQTMFAEFEYIIHGMINKDQPVVKETIKTTY
LNLLKKYFGPSLKFDENSSLECLRVPHFYSPFYVYQYATGITAALLIYKNIKDNKKDATKDYIEFLKTGGSKYPLESLKV
TGVDLSLKSTIKNTINIFKERLEDVKKLF
>Mature_589_residues
MIERSKINENDKWDLSSLFKNNEEYRETVKKIKLKLQDFKKYEKLEFDLNIFKQALNDYYEIEEELERTVYYTHIQLETD
VSNQTSNELRTINVNLETEASNATSFFIPKILKTDTKQVREWLKDIELKDKKIAIEKILREKEHILSEDEEKILANYTSL
YSSYNDIFSVLTNADMDFGEIDGKSLSNATYNLFLQNENQEIRRKAFLKFYQEYKKHENTLANTLIADMNKNKFLAKTRK
FEDTISMKLFQNNIDKKVYTNLIETVNENLSVLHEYYEFRKSILNQEYLNHYDVYVPLTKDIKFKNSFKEACDQILKSLE
ILGNEYTEVLRKGLLEERWVDKYENKGKRAGAFSAGSYNGKPYILMNYKDESIRDMFTLAHEAGHSMHSYFSIKNNPFPQ
YQYSIFEAEIASTVNEQILAEYLLKNENDIEKIKYIKLNQIDDLLATFFRQTMFAEFEYIIHGMINKDQPVVKETIKTTY
LNLLKKYFGPSLKFDENSSLECLRVPHFYSPFYVYQYATGITAALLIYKNIKDNKKDATKDYIEFLKTGGSKYPLESLKV
TGVDLSLKSTIKNTINIFKERLEDVKKLF

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 69655; Mature: 69655

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERSKINENDKWDLSSLFKNNEEYRETVKKIKLKLQDFKKYEKLEFDLNIFKQALNDYY
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEEELERTVYYTHIQLETDVSNQTSNELRTINVNLETEASNATSFFIPKILKTDTKQVR
HHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHH
EWLKDIELKDKKIAIEKILREKEHILSEDEEKILANYTSLYSSYNDIFSVLTNADMDFGE
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IDGKSLSNATYNLFLQNENQEIRRKAFLKFYQEYKKHENTLANTLIADMNKNKFLAKTRK
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FEDTISMKLFQNNIDKKVYTNLIETVNENLSVLHEYYEFRKSILNQEYLNHYDVYVPLTK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DIKFKNSFKEACDQILKSLEILGNEYTEVLRKGLLEERWVDKYENKGKRAGAFSAGSYNG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KPYILMNYKDESIRDMFTLAHEAGHSMHSYFSIKNNPFPQYQYSIFEAEIASTVNEQILA
CEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
EYLLKNENDIEKIKYIKLNQIDDLLATFFRQTMFAEFEYIIHGMINKDQPVVKETIKTTY
HHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LNLLKKYFGPSLKFDENSSLECLRVPHFYSPFYVYQYATGITAALLIYKNIKDNKKDATK
HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DYIEFLKTGGSKYPLESLKVTGVDLSLKSTIKNTINIFKERLEDVKKLF
HHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIERSKINENDKWDLSSLFKNNEEYRETVKKIKLKLQDFKKYEKLEFDLNIFKQALNDYY
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EIEEELERTVYYTHIQLETDVSNQTSNELRTINVNLETEASNATSFFIPKILKTDTKQVR
HHHHHHHHHEEEEEEEEEECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHH
EWLKDIELKDKKIAIEKILREKEHILSEDEEKILANYTSLYSSYNDIFSVLTNADMDFGE
HHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
IDGKSLSNATYNLFLQNENQEIRRKAFLKFYQEYKKHENTLANTLIADMNKNKFLAKTRK
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
FEDTISMKLFQNNIDKKVYTNLIETVNENLSVLHEYYEFRKSILNQEYLNHYDVYVPLTK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
DIKFKNSFKEACDQILKSLEILGNEYTEVLRKGLLEERWVDKYENKGKRAGAFSAGSYNG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
KPYILMNYKDESIRDMFTLAHEAGHSMHSYFSIKNNPFPQYQYSIFEAEIASTVNEQILA
CEEEEEECCCHHHHHHHHHHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
EYLLKNENDIEKIKYIKLNQIDDLLATFFRQTMFAEFEYIIHGMINKDQPVVKETIKTTY
HHHHCCCCCHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LNLLKKYFGPSLKFDENSSLECLRVPHFYSPFYVYQYATGITAALLIYKNIKDNKKDATK
HHHHHHHCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
DYIEFLKTGGSKYPLESLKVTGVDLSLKSTIKNTINIFKERLEDVKKLF
HHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]