Definition Borrelia hermsii DAH chromosome, complete genome.
Accession NC_010673
Length 922,307

Click here to switch to the map view.

The map label for this gene is lnt [H]

Identifier: 187918109

GI number: 187918109

Start: 241625

End: 243178

Strand: Direct

Name: lnt [H]

Synonym: BH0237

Alternate gene names: 187918109

Gene position: 241625-243178 (Clockwise)

Preceding gene: 187918100

Following gene: 187918112

Centisome position: 26.2

GC content: 30.18

Gene sequence:

>1554_bases
ATGAAAATAAGATATTTCTGCCTAGCCGCATTTTCAGGCATGCTTACAACTCTGGCAATCCCAAATGAAATCAAAAACAT
AGGATATTCAAGCATTGGTCTAGTTGCATACATACCACTTTTCATCGCATTAATTCAAATAAAGAATAAAAAAACTCTCA
TCAGTTTAACAATCTTTTACTTTTTAATAGCTAATAGCCTACAAAATTTTTGGCTTGCATTTTTTCATTCATTTGGACTA
ATCACATTCCTAGGAGCAGTATGTGGATATATTCCTTACGCTTTAGTTTTAGGATACTTGCTATACTATTCACTCAAAAC
TTTTAAGAATAAAACATTGACCTTAGCCATACTCTTCACATTTTATGATTACTCAAAATCAATTGGATTTGCAGCATATC
CTTGGGGATTTTCAGCCTTTATGGTAAATAACTTTAATGATCTCATACAGGTAGCTGACATTTTTGGGGTCTTTTTTGTA
TGCTTCATCGTTTACTTTTTTAATGCAGGAATTGCAAATTTTTTCATAAAACAAAGCAAAACAAACACATTAAGCCTATT
ATTCTCCATTCTATTAGTAAGTACATCTTTCACTTACGGTATCATGAAAAAACAAGCATTAAATCCAATCTTAAGCAAAG
AAATAGATACTCTAAAAATTGCAGCAATCCAACTTAATATCGATCCTTGGCTACCTGGAAATCATAAAGAAGGAATTAAA
ACATCTATTAAACTTACAAAACAAGCATTAAGAAAACACCCAGATACAGAACTTGTACTCTGGAGCGAAGGAGTATTAAC
TTTACCATTTAATTCTTACAAAGATTATATTTACTATGATGAAGAATTGATTGGGCTATATGATTCAATAAATGAACTAA
TAATAAACAGCAAAGCCTACTTTGTCATTGGTTCACCTTCAAGAACAGATAAAAGCTCATTCACATATCAAAATTCAGTC
TATGCAATAAACCCTAATCTTAAGATAGAAAATATATATTCTAAAATATTCTTAGTTCCATTTTCAGAAAAAGTACCATT
TTATGAATATAAATTTGTAAGAGATTTTTTCCGTCAAAACTTTAAACTTATAGGACAAATTAACGGAAATAAGCTTGAAA
TCTTTAAGCTCAAAAAATTCAATTTGGGCTTCCTAATATGCTATGACGATGCATTTCCAGATCTTGCAAGAAGCTATAAA
AAACAAAACGCAAACCTATTATTAAACTTTTCAAATGATTCTTGGTCACATACAGACTCATCAGAGTGGCAACACTTCGT
AGTAGCAAAATTTAGAAGCATAGAAAATGGAATTAAAACTGTTAGAGCTACAAATTCCGGAATAACTGCTGTAATAAATG
AATATGGAGAAAATGTTCAAAGTCTAGAAACCTTTAAAAAAGGATATCTAATATCAAAAATAAAATTGCCTCCAAGATTC
ACAACAATCTATGAACACATTGGAGACTTATTTATATATGCTCTGGCAATAGCAGTTGTAATTATGACACTAAGATTCTA
TTTTATTGAAAAGAGTACCCATTTATCATCCTGA

Upstream 100 bases:

>100_bases
ATATTATATATATTATACTATGCAATATCGCATATTAATATCTGTACCATTTAATATGCAATATATTTTTATGAATAAAT
ATTAATAAAAAAGAGGAAAA

Downstream 100 bases:

>100_bases
TTTGCAAAACATAAAGTCTGAACATCTCTCCAAAATGGAATATTTTTAGTAAAATCATTTTTCTTAGTCTTAACTTTAAT
GCTATAAGAAACATCCGTAT

Product: apolipoprotein N-acyltransferase

Products: NA

Alternate protein names: ALP N-acyltransferase [H]

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MKIRYFCLAAFSGMLTTLAIPNEIKNIGYSSIGLVAYIPLFIALIQIKNKKTLISLTIFYFLIANSLQNFWLAFFHSFGL
ITFLGAVCGYIPYALVLGYLLYYSLKTFKNKTLTLAILFTFYDYSKSIGFAAYPWGFSAFMVNNFNDLIQVADIFGVFFV
CFIVYFFNAGIANFFIKQSKTNTLSLLFSILLVSTSFTYGIMKKQALNPILSKEIDTLKIAAIQLNIDPWLPGNHKEGIK
TSIKLTKQALRKHPDTELVLWSEGVLTLPFNSYKDYIYYDEELIGLYDSINELIINSKAYFVIGSPSRTDKSSFTYQNSV
YAINPNLKIENIYSKIFLVPFSEKVPFYEYKFVRDFFRQNFKLIGQINGNKLEIFKLKKFNLGFLICYDDAFPDLARSYK
KQNANLLLNFSNDSWSHTDSSEWQHFVVAKFRSIENGIKTVRATNSGITAVINEYGENVQSLETFKKGYLISKIKLPPRF
TTIYEHIGDLFIYALAIAVVIMTLRFYFIEKSTHLSS

Sequences:

>Translated_517_residues
MKIRYFCLAAFSGMLTTLAIPNEIKNIGYSSIGLVAYIPLFIALIQIKNKKTLISLTIFYFLIANSLQNFWLAFFHSFGL
ITFLGAVCGYIPYALVLGYLLYYSLKTFKNKTLTLAILFTFYDYSKSIGFAAYPWGFSAFMVNNFNDLIQVADIFGVFFV
CFIVYFFNAGIANFFIKQSKTNTLSLLFSILLVSTSFTYGIMKKQALNPILSKEIDTLKIAAIQLNIDPWLPGNHKEGIK
TSIKLTKQALRKHPDTELVLWSEGVLTLPFNSYKDYIYYDEELIGLYDSINELIINSKAYFVIGSPSRTDKSSFTYQNSV
YAINPNLKIENIYSKIFLVPFSEKVPFYEYKFVRDFFRQNFKLIGQINGNKLEIFKLKKFNLGFLICYDDAFPDLARSYK
KQNANLLLNFSNDSWSHTDSSEWQHFVVAKFRSIENGIKTVRATNSGITAVINEYGENVQSLETFKKGYLISKIKLPPRF
TTIYEHIGDLFIYALAIAVVIMTLRFYFIEKSTHLSS
>Mature_517_residues
MKIRYFCLAAFSGMLTTLAIPNEIKNIGYSSIGLVAYIPLFIALIQIKNKKTLISLTIFYFLIANSLQNFWLAFFHSFGL
ITFLGAVCGYIPYALVLGYLLYYSLKTFKNKTLTLAILFTFYDYSKSIGFAAYPWGFSAFMVNNFNDLIQVADIFGVFFV
CFIVYFFNAGIANFFIKQSKTNTLSLLFSILLVSTSFTYGIMKKQALNPILSKEIDTLKIAAIQLNIDPWLPGNHKEGIK
TSIKLTKQALRKHPDTELVLWSEGVLTLPFNSYKDYIYYDEELIGLYDSINELIINSKAYFVIGSPSRTDKSSFTYQNSV
YAINPNLKIENIYSKIFLVPFSEKVPFYEYKFVRDFFRQNFKLIGQINGNKLEIFKLKKFNLGFLICYDDAFPDLARSYK
KQNANLLLNFSNDSWSHTDSSEWQHFVVAKFRSIENGIKTVRATNSGITAVINEYGENVQSLETFKKGYLISKIKLPPRF
TTIYEHIGDLFIYALAIAVVIMTLRFYFIEKSTHLSS

Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]

COG id: COG0815

COG function: function code M; Apolipoprotein N-acyltransferase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1786878, Length=422, Percent_Identity=23.2227488151659, Blast_Score=76, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004563
- InterPro:   IPR003010 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 2.3.1.- [C]

Molecular weight: Translated: 59349; Mature: 59349

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRYFCLAAFSGMLTTLAIPNEIKNIGYSSIGLVAYIPLFIALIQIKNKKTLISLTIFY
CCEEEHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLIANSLQNFWLAFFHSFGLITFLGAVCGYIPYALVLGYLLYYSLKTFKNKTLTLAILFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEH
FYDYSKSIGFAAYPWGFSAFMVNNFNDLIQVADIFGVFFVCFIVYFFNAGIANFFIKQSK
HHHHHCCCCCEECCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
TNTLSLLFSILLVSTSFTYGIMKKQALNPILSKEIDTLKIAAIQLNIDPWLPGNHKEGIK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHH
TSIKLTKQALRKHPDTELVLWSEGVLTLPFNSYKDYIYYDEELIGLYDSINELIINSKAY
HHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEE
FVIGSPSRTDKSSFTYQNSVYAINPNLKIENIYSKIFLVPFSEKVPFYEYKFVRDFFRQN
EEEECCCCCCCCCCEECCEEEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCC
FKLIGQINGNKLEIFKLKKFNLGFLICYDDAFPDLARSYKKQNANLLLNFSNDSWSHTDS
CEEEEEECCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCC
SEWQHFVVAKFRSIENGIKTVRATNSGITAVINEYGENVQSLETFKKGYLISKIKLPPRF
HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHH
TTIYEHIGDLFIYALAIAVVIMTLRFYFIEKSTHLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKIRYFCLAAFSGMLTTLAIPNEIKNIGYSSIGLVAYIPLFIALIQIKNKKTLISLTIFY
CCEEEHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLIANSLQNFWLAFFHSFGLITFLGAVCGYIPYALVLGYLLYYSLKTFKNKTLTLAILFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEH
FYDYSKSIGFAAYPWGFSAFMVNNFNDLIQVADIFGVFFVCFIVYFFNAGIANFFIKQSK
HHHHHCCCCCEECCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
TNTLSLLFSILLVSTSFTYGIMKKQALNPILSKEIDTLKIAAIQLNIDPWLPGNHKEGIK
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEEEEEEEECCCCCCCCCCCCHH
TSIKLTKQALRKHPDTELVLWSEGVLTLPFNSYKDYIYYDEELIGLYDSINELIINSKAY
HHHHHHHHHHHHCCCCEEEEEECCEEECCCCCCCCCEEECHHHHHHHHHHHHHHCCCCEE
FVIGSPSRTDKSSFTYQNSVYAINPNLKIENIYSKIFLVPFSEKVPFYEYKFVRDFFRQN
EEEECCCCCCCCCCEECCEEEEECCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHCC
FKLIGQINGNKLEIFKLKKFNLGFLICYDDAFPDLARSYKKQNANLLLNFSNDSWSHTDS
CEEEEEECCCEEEEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCEEEEECCCCCCCCCC
SEWQHFVVAKFRSIENGIKTVRATNSGITAVINEYGENVQSLETFKKGYLISKIKLPPRF
HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCHH
TTIYEHIGDLFIYALAIAVVIMTLRFYFIEKSTHLSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]