Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736569
Identifier: 187736569
GI number: 187736569
Start: 2542369
End: 2543943
Strand: Direct
Name: 187736569
Synonym: Amuc_2091
Alternate gene names: NA
Gene position: 2542369-2543943 (Clockwise)
Preceding gene: 187736568
Following gene: 187736570
Centisome position: 95.43
GC content: 61.46
Gene sequence:
>1575_bases ATGGAACAGACCCGGAAACAAACGGACATCGCATTAACCATCAGCGGGAGGTTTGCCGCATCCTGCACCGTGGCCTATAT GGCGCTCCCCACCCTCCTTTTCCTGCTGGGATGGGTCAGGCCCCTGTTTTCCATTCCGGCCGCTGCGGCCGTAGCCGCGG CCTCCGTCCTGCTGAGCGCAACAATCCCGGCCCCCACGCTTCACCTGACCAGACGGCAGCTGGCCATTTACCTCTGTGCC CTCGCCCTTTCCCTCCTGTGGCTTCTGGCGGGCGGAATGACGGGAATCACTTCCCAGCACGCGGACTTTGTGGTCCGCAA CCCCATTTATGAAACCCTCATCCGTTGCGACTGGCCGCTGGTGGACGCGGGAGACAGCCACTTCATTTACTACCTCGCCT TCTGGCTGCCACCGGCTCTGGCGTGCAAATGTTTCTCCTGTTCGGACATATTCATCATTAACTATGTCCTGACCGCCTGG ACGGGGTTGGGCCTGGCGCTGACCCTCACGGTCCTCTGGAGCAGATTCCGCTCGGCCACCCTGCTCTTCCTGCTCCTGCT CATCTTCCAGGGCCCGCTGGACGGCATCGTCAGGTGGGGGCTTCATTTGCTCAATTTGCAGGGGCCCCTGGCCCACGAAC TCTACCTGACGGTACTGGCTTTCTTCGGAGGCGTGCCCCCCACCATGCAGCTTCATTACACCTTTCATCACACCACGCTG CTGTGGCTGTTCCTGGCCATGGCGGTCTCCTGGAACATTCCGCCCAAATACCAGCTCTTCCTGGCCGCCCTGTGCCTGCT CGCCTCTCCCATCGGCTCGCTGGGCCTTCTGGTCTTCATCGCCGTCCGCACGCTGGTCCACCGTACTCCCGTCAGGCAAT ACTTCTCCTCCTGGACGGTGCTGGCGGGCGCCGCGCTGGTGCTGCTGGCCGGCATCTATTTTACAAGCAGCAACGGAAAC AACCGCATCCGCCTGACGTGGCAGGACTCCCCCTTTGACCTGCTCCAGTACGGCAACTGGAAATTCTGGGGCGCCATGGC CGGCTCCTGGCTGCTGACGGTCGGCGTTCCGGCGGCGCTTCTGTTCCGCCGCTTCAAAAAAGACACCCTGCTCTGGTCAG CCCTGGTCATTCTCACGCTCACCTACTTCATTTACATAGGTTCCGTGGGCGGCTACAATGAATTCTGCTACAAGGCATCC AGCGTCAGCTTTTTCTGCCTGGCTCTCCTATTCACCCGCATCTTCGTGGAACGGGTGGGAACGCCCCGGTGGCGCAAACT GTGCGTCTGTTATCTGCTCCTGGCCGCACTCCCCAGCCTCTCCGTCTTCGCCAAGGCCGCACCCACACTCGCCTTGACGA AGCCTGCGCGGCTCGCCAACATGCAGCGGGAATGGAAGGGACATCTCCACCATCCGGAACATCCCTGGAACGCGCCCCTT TGGGGAGCCGGAGAAAGCGGAGCCTTCCGGAACATCTATTTCCAGAAGGCGGGCCAATCCGCTGAAGGGCCGCTGGCCGC CTTTTCCACCGGAATAAAAACAGACGCGGAACCAGCCGCCACACCCCGGCCATAA
Upstream 100 bases:
>100_bases GCCAAAAGCCGGAAATTCACGCGGGAACATATCATTCCCCAGTGGGAAAAAGCTTTCCTCCCAGACGCCTCCTGAACACG CCTTCCCCCTTTCTCTCTAC
Downstream 100 bases:
>100_bases CCCCTCTTTCACCACTCACCCCCATCCCCAGCCATGGATCTTTCCCGTTACCAGGAACACTACTCCCTCAGCCACCGCCT CAAACGGTATGGCTGGTACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MEQTRKQTDIALTISGRFAASCTVAYMALPTLLFLLGWVRPLFSIPAAAAVAAASVLLSATIPAPTLHLTRRQLAIYLCA LALSLLWLLAGGMTGITSQHADFVVRNPIYETLIRCDWPLVDAGDSHFIYYLAFWLPPALACKCFSCSDIFIINYVLTAW TGLGLALTLTVLWSRFRSATLLFLLLLIFQGPLDGIVRWGLHLLNLQGPLAHELYLTVLAFFGGVPPTMQLHYTFHHTTL LWLFLAMAVSWNIPPKYQLFLAALCLLASPIGSLGLLVFIAVRTLVHRTPVRQYFSSWTVLAGAALVLLAGIYFTSSNGN NRIRLTWQDSPFDLLQYGNWKFWGAMAGSWLLTVGVPAALLFRRFKKDTLLWSALVILTLTYFIYIGSVGGYNEFCYKAS SVSFFCLALLFTRIFVERVGTPRWRKLCVCYLLLAALPSLSVFAKAAPTLALTKPARLANMQREWKGHLHHPEHPWNAPL WGAGESGAFRNIYFQKAGQSAEGPLAAFSTGIKTDAEPAATPRP
Sequences:
>Translated_524_residues MEQTRKQTDIALTISGRFAASCTVAYMALPTLLFLLGWVRPLFSIPAAAAVAAASVLLSATIPAPTLHLTRRQLAIYLCA LALSLLWLLAGGMTGITSQHADFVVRNPIYETLIRCDWPLVDAGDSHFIYYLAFWLPPALACKCFSCSDIFIINYVLTAW TGLGLALTLTVLWSRFRSATLLFLLLLIFQGPLDGIVRWGLHLLNLQGPLAHELYLTVLAFFGGVPPTMQLHYTFHHTTL LWLFLAMAVSWNIPPKYQLFLAALCLLASPIGSLGLLVFIAVRTLVHRTPVRQYFSSWTVLAGAALVLLAGIYFTSSNGN NRIRLTWQDSPFDLLQYGNWKFWGAMAGSWLLTVGVPAALLFRRFKKDTLLWSALVILTLTYFIYIGSVGGYNEFCYKAS SVSFFCLALLFTRIFVERVGTPRWRKLCVCYLLLAALPSLSVFAKAAPTLALTKPARLANMQREWKGHLHHPEHPWNAPL WGAGESGAFRNIYFQKAGQSAEGPLAAFSTGIKTDAEPAATPRP >Mature_524_residues MEQTRKQTDIALTISGRFAASCTVAYMALPTLLFLLGWVRPLFSIPAAAAVAAASVLLSATIPAPTLHLTRRQLAIYLCA LALSLLWLLAGGMTGITSQHADFVVRNPIYETLIRCDWPLVDAGDSHFIYYLAFWLPPALACKCFSCSDIFIINYVLTAW TGLGLALTLTVLWSRFRSATLLFLLLLIFQGPLDGIVRWGLHLLNLQGPLAHELYLTVLAFFGGVPPTMQLHYTFHHTTL LWLFLAMAVSWNIPPKYQLFLAALCLLASPIGSLGLLVFIAVRTLVHRTPVRQYFSSWTVLAGAALVLLAGIYFTSSNGN NRIRLTWQDSPFDLLQYGNWKFWGAMAGSWLLTVGVPAALLFRRFKKDTLLWSALVILTLTYFIYIGSVGGYNEFCYKAS SVSFFCLALLFTRIFVERVGTPRWRKLCVCYLLLAALPSLSVFAKAAPTLALTKPARLANMQREWKGHLHHPEHPWNAPL WGAGESGAFRNIYFQKAGQSAEGPLAAFSTGIKTDAEPAATPRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58038; Mature: 58038
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTRKQTDIALTISGRFAASCTVAYMALPTLLFLLGWVRPLFSIPAAAAVAAASVLLSA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TIPAPTLHLTRRQLAIYLCALALSLLWLLAGGMTGITSQHADFVVRNPIYETLIRCDWPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHCCCCE VDAGDSHFIYYLAFWLPPALACKCFSCSDIFIINYVLTAWTGLGLALTLTVLWSRFRSAT ECCCCCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFLLLLIFQGPLDGIVRWGLHLLNLQGPLAHELYLTVLAFFGGVPPTMQLHYTFHHTTL HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH LWLFLAMAVSWNIPPKYQLFLAALCLLASPIGSLGLLVFIAVRTLVHRTPVRQYFSSWTV HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGAALVLLAGIYFTSSNGNNRIRLTWQDSPFDLLQYGNWKFWGAMAGSWLLTVGVPAAL HHHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHCCCEEEEHHHCCCCHHHHHHHHHH LFRRFKKDTLLWSALVILTLTYFIYIGSVGGYNEFCYKASSVSFFCLALLFTRIFVERVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC TPRWRKLCVCYLLLAALPSLSVFAKAAPTLALTKPARLANMQREWKGHLHHPEHPWNAPL CHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC WGAGESGAFRNIYFQKAGQSAEGPLAAFSTGIKTDAEPAATPRP CCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MEQTRKQTDIALTISGRFAASCTVAYMALPTLLFLLGWVRPLFSIPAAAAVAAASVLLSA CCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TIPAPTLHLTRRQLAIYLCALALSLLWLLAGGMTGITSQHADFVVRNPIYETLIRCDWPL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHCCCCE VDAGDSHFIYYLAFWLPPALACKCFSCSDIFIINYVLTAWTGLGLALTLTVLWSRFRSAT ECCCCCCCHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFLLLLIFQGPLDGIVRWGLHLLNLQGPLAHELYLTVLAFFGGVPPTMQLHYTFHHTTL HHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHH LWLFLAMAVSWNIPPKYQLFLAALCLLASPIGSLGLLVFIAVRTLVHRTPVRQYFSSWTV HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGAALVLLAGIYFTSSNGNNRIRLTWQDSPFDLLQYGNWKFWGAMAGSWLLTVGVPAAL HHHHHHHHHHHHHEECCCCCCEEEEEECCCCHHHHHCCCEEEEHHHCCCCHHHHHHHHHH LFRRFKKDTLLWSALVILTLTYFIYIGSVGGYNEFCYKASSVSFFCLALLFTRIFVERVG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCC TPRWRKLCVCYLLLAALPSLSVFAKAAPTLALTKPARLANMQREWKGHLHHPEHPWNAPL CHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC WGAGESGAFRNIYFQKAGQSAEGPLAAFSTGIKTDAEPAATPRP CCCCCCCCHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA