Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is wcaE [C]
Identifier: 187736559
GI number: 187736559
Start: 2531678
End: 2532454
Strand: Direct
Name: wcaE [C]
Synonym: Amuc_2081
Alternate gene names: 187736559
Gene position: 2531678-2532454 (Clockwise)
Preceding gene: 187736558
Following gene: 187736560
Centisome position: 95.03
GC content: 53.02
Gene sequence:
>777_bases ATGAAAATTTCAGTCATTACGGTTTGTTATAACAGCATTGCAACGCTGCAAGACACGCTGGAAAGCATTCTGCGGCAAAC CTACCCGGACGTGGAAAGCATTGTGGTGGACGGGGCCAGCAAGGATGGAACCGTGGAATTGATTGAAAAATACAGTCATC AATTTTCCGGCCGCATGAAATGGCTATCCGAGCCGGACAAGGGAATTTATGATGCCATGAACAAGGGGATAGGCATGGCC ACGGGAGATGTCATCGGCTTTCTGAATGCGGATGACTATTACCAGGACGGAAACGTGCTGGAAGCCATCGCCGAAGCGTT TGCCCGGCATGGGACGGACGCTGTGCACGGCAATCTGCACTACATCAACGGAGCAAGGGAAATCGTACGCACATGGCGCG GAACGGAGTACACTCCCGGTTCCTTCCAGCGCGGCTGGAACCCGGCGCACCCCACGTTCTATTGTAAAAAGGACTGCTTT ACCCGTTACGGCGGCTTTGATCCTGCTATAGGCAGCGCGGCGGACTTTGAGCTGATGATGCGCTTTATAGAAAAAAACAG CATTTCCACCGCCTATATCGACCGCGACATGGTATTCATGCGCACCGGAGGCTCCAGTACGGCGGGCTTGAGAGCCATTC TGAGGAATACGCGCCAGAACAAGCAGGCATTCAAAAAAAACGGCATCCCTTACCCGTGGCATTACGGAGTAACCCGGCTG CTGGCCAAGGCTGGCAGTATGCGCAATCCCATCCTTTATCTGTTCAAAACCCGTTAA
Upstream 100 bases:
>100_bases AAAGACCTGCCGACCAAAGGCCTTAGGGCAAATACCCAGCTTATCATGAGGAGCCGTCAGAAAAGCGTCCAATAAAAATC CTCCACTCCCCCCGCCAAAA
Downstream 100 bases:
>100_bases ATTTTCTGTTCCCATTCCTTTCCGTCACGCCGTCATGAACCTGATTTTCTATTTTGACCAACCCATCCTGCCCCATGCGG GAGGAACGGAACGGGCGGCA
Product: glycosyl transferase family 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKISVITVCYNSIATLQDTLESILRQTYPDVESIVVDGASKDGTVELIEKYSHQFSGRMKWLSEPDKGIYDAMNKGIGMA TGDVIGFLNADDYYQDGNVLEAIAEAFARHGTDAVHGNLHYINGAREIVRTWRGTEYTPGSFQRGWNPAHPTFYCKKDCF TRYGGFDPAIGSAADFELMMRFIEKNSISTAYIDRDMVFMRTGGSSTAGLRAILRNTRQNKQAFKKNGIPYPWHYGVTRL LAKAGSMRNPILYLFKTR
Sequences:
>Translated_258_residues MKISVITVCYNSIATLQDTLESILRQTYPDVESIVVDGASKDGTVELIEKYSHQFSGRMKWLSEPDKGIYDAMNKGIGMA TGDVIGFLNADDYYQDGNVLEAIAEAFARHGTDAVHGNLHYINGAREIVRTWRGTEYTPGSFQRGWNPAHPTFYCKKDCF TRYGGFDPAIGSAADFELMMRFIEKNSISTAYIDRDMVFMRTGGSSTAGLRAILRNTRQNKQAFKKNGIPYPWHYGVTRL LAKAGSMRNPILYLFKTR >Mature_258_residues MKISVITVCYNSIATLQDTLESILRQTYPDVESIVVDGASKDGTVELIEKYSHQFSGRMKWLSEPDKGIYDAMNKGIGMA TGDVIGFLNADDYYQDGNVLEAIAEAFARHGTDAVHGNLHYINGAREIVRTWRGTEYTPGSFQRGWNPAHPTFYCKKDCF TRYGGFDPAIGSAADFELMMRFIEKNSISTAYIDRDMVFMRTGGSSTAGLRAILRNTRQNKQAFKKNGIPYPWHYGVTRL LAKAGSMRNPILYLFKTR
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788368, Length=98, Percent_Identity=41.8367346938776, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 29003; Mature: 29003
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISVITVCYNSIATLQDTLESILRQTYPDVESIVVDGASKDGTVELIEKYSHQFSGRMK CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHHCCHHH WLSEPDKGIYDAMNKGIGMATGDVIGFLNADDYYQDGNVLEAIAEAFARHGTDAVHGNLH HCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE YINGAREIVRTWRGTEYTPGSFQRGWNPAHPTFYCKKDCFTRYGGFDPAIGSAADFELMM EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCCCHHHHHHHH RFIEKNSISTAYIDRDMVFMRTGGSSTAGLRAILRNTRQNKQAFKKNGIPYPWHYGVTRL HHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LAKAGSMRNPILYLFKTR HHHHCCCCCCEEEEEECC >Mature Secondary Structure MKISVITVCYNSIATLQDTLESILRQTYPDVESIVVDGASKDGTVELIEKYSHQFSGRMK CEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCCCCCHHHHHHHHHHHHCCHHH WLSEPDKGIYDAMNKGIGMATGDVIGFLNADDYYQDGNVLEAIAEAFARHGTDAVHGNLH HCCCCCCHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEE YINGAREIVRTWRGTEYTPGSFQRGWNPAHPTFYCKKDCFTRYGGFDPAIGSAADFELMM EEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECHHHHHHCCCCCCCCCCHHHHHHHH RFIEKNSISTAYIDRDMVFMRTGGSSTAGLRAILRNTRQNKQAFKKNGIPYPWHYGVTRL HHHHHCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH LAKAGSMRNPILYLFKTR HHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]