Click here to switch to the map view.

The map label for this gene is epsL [H]

Identifier: 187736558

GI number: 187736558

Start: 2530804

End: 2531652

Strand: Direct

Name: epsL [H]

Synonym: Amuc_2080

Alternate gene names: 187736558

Gene position: 2530804-2531652 (Clockwise)

Preceding gene: 187736557

Following gene: 187736559

Centisome position: 95.0

GC content: 53.12

Gene sequence:

>849_bases
ATGTCAGCCCCTATAACTAATATCCCCTTCAGCAACCCGCTGTATCGTAATCATAATTTTTACAGACGCTACGGAAAACG
CGCCCTGGATTTCACGGGTGCACTCTTCGGCCTTATATGCCTGTTTCCGGTATTAGCCATTCTGGCTATTCTGCTGGCCA
TCGTCCAGCGGACATCTCCCTTCTTCCTGCAAAAGCGCATCGGGCACGGCCTCAAACCCTTTCATATCATCAAATTCAAA
ACCATGAAAGACACCAGGGACAAGGAAGGGAACCTGCTCCCGGACGAAGAACGCACAACAGTCCTGGGCTCCCTGCTGCG
CAGCACCTCCCTGGACGAACTGCCTGAACTCATCAACGTTCTGCTGGGGGACATGAGCTTTATCGGCCCACGCCCCTGGA
TTCCCGATCAAATGGCCATTTTTACCCCTTCCACCCGGAAAAAAAGAATGTCCCTGCGCCCGGGCATCACGGGGCTGGCC
CAGATTCGCGGGCGCAACAACCTCACCTTCCGCCAGCGGGTATGTTATGACCTGAGCTACCAACGCCACCTGACCTTTCG
GTACGACCTGAATATCCTTTTTTACACCTTCCTCAAGGTTGTCGAGAGAGAAGGCATTCAACAGCGACCGGATGCCCTGA
GCACACCGGCCCGTGTACTGAAGCCCAGGGATTTGATGACCTACGGATTAAAAGAAAATACGCAACTCATCTTAAGAAGT
ATCCGAAAAGAACCCGTCCCATCCTTGAGCGTACCCGACCATCCCTTGACCCCCAAAGACCTGCCGACCAAAGGCCTTAG
GGCAAATACCCAGCTTATCATGAGGAGCCGTCAGAAAAGCGTCCAATAA

Upstream 100 bases:

>100_bases
AATGGTGGGGGACAGACAGCCACAACATCGCCATGGCCAAACGCATGCCTCTGAAAAACTAACTCCGCCTACCCTATCAA
CAACCTCTCGTACTACACCC

Downstream 100 bases:

>100_bases
AAATCCTCCACTCCCCCCGCCAAAAATGAAAATTTCAGTCATTACGGTTTGTTATAACAGCATTGCAACGCTGCAAGACA
CGCTGGAAAGCATTCTGCGG

Product: sugar transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSAPITNIPFSNPLYRNHNFYRRYGKRALDFTGALFGLICLFPVLAILAILLAIVQRTSPFFLQKRIGHGLKPFHIIKFK
TMKDTRDKEGNLLPDEERTTVLGSLLRSTSLDELPELINVLLGDMSFIGPRPWIPDQMAIFTPSTRKKRMSLRPGITGLA
QIRGRNNLTFRQRVCYDLSYQRHLTFRYDLNILFYTFLKVVEREGIQQRPDALSTPARVLKPRDLMTYGLKENTQLILRS
IRKEPVPSLSVPDHPLTPKDLPTKGLRANTQLIMRSRQKSVQ

Sequences:

>Translated_282_residues
MSAPITNIPFSNPLYRNHNFYRRYGKRALDFTGALFGLICLFPVLAILAILLAIVQRTSPFFLQKRIGHGLKPFHIIKFK
TMKDTRDKEGNLLPDEERTTVLGSLLRSTSLDELPELINVLLGDMSFIGPRPWIPDQMAIFTPSTRKKRMSLRPGITGLA
QIRGRNNLTFRQRVCYDLSYQRHLTFRYDLNILFYTFLKVVEREGIQQRPDALSTPARVLKPRDLMTYGLKENTQLILRS
IRKEPVPSLSVPDHPLTPKDLPTKGLRANTQLIMRSRQKSVQ
>Mature_281_residues
SAPITNIPFSNPLYRNHNFYRRYGKRALDFTGALFGLICLFPVLAILAILLAIVQRTSPFFLQKRIGHGLKPFHIIKFKT
MKDTRDKEGNLLPDEERTTVLGSLLRSTSLDELPELINVLLGDMSFIGPRPWIPDQMAIFTPSTRKKRMSLRPGITGLAQ
IRGRNNLTFRQRVCYDLSYQRHLTFRYDLNILFYTFLKVVEREGIQQRPDALSTPARVLKPRDLMTYGLKENTQLILRSI
RKEPVPSLSVPDHPLTPKDLPTKGLRANTQLIMRSRQKSVQ

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=187, Percent_Identity=35.2941176470588, Blast_Score=98, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 32473; Mature: 32342

Theoretical pI: Translated: 11.10; Mature: 11.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPITNIPFSNPLYRNHNFYRRYGKRALDFTGALFGLICLFPVLAILAILLAIVQRTSP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FFLQKRIGHGLKPFHIIKFKTMKDTRDKEGNLLPDEERTTVLGSLLRSTSLDELPELINV
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LLGDMSFIGPRPWIPDQMAIFTPSTRKKRMSLRPGITGLAQIRGRNNLTFRQRVCYDLSY
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCH
QRHLTFRYDLNILFYTFLKVVEREGIQQRPDALSTPARVLKPRDLMTYGLKENTQLILRS
HHEEEEEEHHHHHHHHHHHHHHHHCHHCCCCHHCCCHHHHCCHHHHHHCCCCHHHHHHHH
IRKEPVPSLSVPDHPLTPKDLPTKGLRANTQLIMRSRQKSVQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SAPITNIPFSNPLYRNHNFYRRYGKRALDFTGALFGLICLFPVLAILAILLAIVQRTSP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
FFLQKRIGHGLKPFHIIKFKTMKDTRDKEGNLLPDEERTTVLGSLLRSTSLDELPELINV
HHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
LLGDMSFIGPRPWIPDQMAIFTPSTRKKRMSLRPGITGLAQIRGRNNLTFRQRVCYDLSY
HHHHHHHCCCCCCCCCCEEEECCCHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHCCH
QRHLTFRYDLNILFYTFLKVVEREGIQQRPDALSTPARVLKPRDLMTYGLKENTQLILRS
HHEEEEEEHHHHHHHHHHHHHHHHCHHCCCCHHCCCHHHHCCHHHHHHCCCCHHHHHHHH
IRKEPVPSLSVPDHPLTPKDLPTKGLRANTQLIMRSRQKSVQ
HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]