Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736541
Identifier: 187736541
GI number: 187736541
Start: 2506304
End: 2506924
Strand: Direct
Name: 187736541
Synonym: Amuc_2062
Alternate gene names: NA
Gene position: 2506304-2506924 (Clockwise)
Preceding gene: 187736533
Following gene: 187736542
Centisome position: 94.08
GC content: 56.2
Gene sequence:
>621_bases ATGATCAATGAATCCTTACTTCAGCCGGATACGCCATCCGCGCTGGACATCTGCAACGCGGCCCTCTCCAAAATAGGGGA GGCACCTCTGGACGCGCTGATTGCCAATGAATCCACGGCATCCCGCCTTTGCGTTCTTCATTACCATCCGGCCCGCAGGG AAACCCTTTGCATGGCGCGCTGGACATTCGCCGCCACGCAAACCACTCTGGACTCCGTTTCCGCACAGGCGCCCAATTCC CTGACCCCCTATCAATTCACGCTGCCCGCAGACTGCCTGCGCGTGCTGGATGTGGAATGCTCGGAATGGAAAATGCAGGG ACGCCGCATTCATGCTTCCTGCGCCCCGCTGCCCCTAAGCTACATTGCCGATATTGAAAACACCGACCAATTCGATCCCC TCTTCATGGACGCACTGGCCACCCGGCTGGCAGAAAAACTGGCCATGCCCCTGACGGGCAACCAAAGCCTGCGCCAGAAT CTTAACCAGGAATTCCATAAAATCATTCTTCCGCAGGCGGCTACCGTCAATGCGGTGCAGTGCTTTTCCAATGATTCCCA CCCGCTGCTGGATTTGCTGAGAAAAACCAAATCGCCCTCTTGCACGGAAGAATGTGAATAA
Upstream 100 bases:
>100_bases TGAGGAAAAACCGGACGCATACATGCCATTGGTGGCATCAAAGAGGTCGCCTCCAAACGTGATGCATTCCGCATCCGTTT CCTCCAAAACATAGGGCGCT
Downstream 100 bases:
>100_bases CATGAGAATAATAAGCAAATAACATAATAATAAGTTGTGAATACATGCTCATGAAAGCACTGGATTTCATACAGATATTT GCCTCCAACGTCCGCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MINESLLQPDTPSALDICNAALSKIGEAPLDALIANESTASRLCVLHYHPARRETLCMARWTFAATQTTLDSVSAQAPNS LTPYQFTLPADCLRVLDVECSEWKMQGRRIHASCAPLPLSYIADIENTDQFDPLFMDALATRLAEKLAMPLTGNQSLRQN LNQEFHKIILPQAATVNAVQCFSNDSHPLLDLLRKTKSPSCTEECE
Sequences:
>Translated_206_residues MINESLLQPDTPSALDICNAALSKIGEAPLDALIANESTASRLCVLHYHPARRETLCMARWTFAATQTTLDSVSAQAPNS LTPYQFTLPADCLRVLDVECSEWKMQGRRIHASCAPLPLSYIADIENTDQFDPLFMDALATRLAEKLAMPLTGNQSLRQN LNQEFHKIILPQAATVNAVQCFSNDSHPLLDLLRKTKSPSCTEECE >Mature_206_residues MINESLLQPDTPSALDICNAALSKIGEAPLDALIANESTASRLCVLHYHPARRETLCMARWTFAATQTTLDSVSAQAPNS LTPYQFTLPADCLRVLDVECSEWKMQGRRIHASCAPLPLSYIADIENTDQFDPLFMDALATRLAEKLAMPLTGNQSLRQN LNQEFHKIILPQAATVNAVQCFSNDSHPLLDLLRKTKSPSCTEECE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22773; Mature: 22773
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINESLLQPDTPSALDICNAALSKIGEAPLDALIANESTASRLCVLHYHPARRETLCMAR CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHEEEEEEECCCCHHHHHHHH WTFAATQTTLDSVSAQAPNSLTPYQFTLPADCLRVLDVECSEWKMQGRRIHASCAPLPLS HHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCHHHHHHCCCEEECCCCCCCHH YIADIENTDQFDPLFMDALATRLAEKLAMPLTGNQSLRQNLNQEFHKIILPQAATVNAVQ HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH CFSNDSHPLLDLLRKTKSPSCTEECE HHCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MINESLLQPDTPSALDICNAALSKIGEAPLDALIANESTASRLCVLHYHPARRETLCMAR CCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCHHEEEEEEECCCCHHHHHHHH WTFAATQTTLDSVSAQAPNSLTPYQFTLPADCLRVLDVECSEWKMQGRRIHASCAPLPLS HHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHCCCHHHHHHCCCEEECCCCCCCHH YIADIENTDQFDPLFMDALATRLAEKLAMPLTGNQSLRQNLNQEFHKIILPQAATVNAVQ HHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH CFSNDSHPLLDLLRKTKSPSCTEECE HHCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA