Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yqgX [H]

Identifier: 187736505

GI number: 187736505

Start: 2459621

End: 2460250

Strand: Reverse

Name: yqgX [H]

Synonym: Amuc_2026

Alternate gene names: 187736505

Gene position: 2460250-2459621 (Counterclockwise)

Preceding gene: 187736506

Following gene: 187736504

Centisome position: 92.35

GC content: 53.97

Gene sequence:

>630_bases
ATGGATCGGATTCGCGTTTATACGGGTGGAGTTGCTTCCTGTAATGGTTACCTCTTTAAGACGAGGGATAACGCTTACGT
GGCGGTGGACGCTCCGTCCGGCTTTGCGGACTGGATCTATTCCAAAAAGCCCGATATCATCATCACGGATCTTCTCATCA
CCCACCAGCATTTTGACCATGTGGAGGATGCCTGCCGCATGCGCCAGATTTTCGACTGCCGCATTCATGCCGGGCAACCT
TACAATGAAAGCCTGACGCTGGAAAAAATGGCCCGCGACGCCTGGGGACTTCCCCTCAATGTTCAGCCGTTTGTGGTGGA
TGAAATACTTACTCCGGACATTCACACGGCGAATTGGGGCGGCCTGTTGTGGCATCTCCACCAGGTGCCCGGCCATTCTC
CGGACAGCATTGTTTACGATTTGCCGGATGAAGGAATCATGTTCACAGGTGACGTCATTTTTGCCGGCTCCATCGGGCGG
ACGGATCTCCCGGGAGGAAACCTGCGCCTGCTGAAACAGGGCATTGAAAAGAAAGTGCTCAACCAGCCCGCCACGACCAT
GATTTTCCCGGGCCACGGTCCATATACCAACGTGAAAAACGAACTGCTGACCAATCCGTTCATCTCCTGA

Upstream 100 bases:

>100_bases
CTGATATGAGGGGCTTTTCCAGGGGAAGATGACAGAAAGCTATTTAAGGGAACCGTCTTTATACTGGATATTCCGGGCAA
TCTCACTACAATCCCTGCCC

Downstream 100 bases:

>100_bases
CCGCGATTCCCGCGCCGCTGTACGGAATCGTGTTCTACTCTTTAGCAAGCATACAAGATCAATGTTATTTTCAGAATTAG
GTTTATCGGAACCCGTCTTG

Product: beta-lactamase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDRIRVYTGGVASCNGYLFKTRDNAYVAVDAPSGFADWIYSKKPDIIITDLLITHQHFDHVEDACRMRQIFDCRIHAGQP
YNESLTLEKMARDAWGLPLNVQPFVVDEILTPDIHTANWGGLLWHLHQVPGHSPDSIVYDLPDEGIMFTGDVIFAGSIGR
TDLPGGNLRLLKQGIEKKVLNQPATTMIFPGHGPYTNVKNELLTNPFIS

Sequences:

>Translated_209_residues
MDRIRVYTGGVASCNGYLFKTRDNAYVAVDAPSGFADWIYSKKPDIIITDLLITHQHFDHVEDACRMRQIFDCRIHAGQP
YNESLTLEKMARDAWGLPLNVQPFVVDEILTPDIHTANWGGLLWHLHQVPGHSPDSIVYDLPDEGIMFTGDVIFAGSIGR
TDLPGGNLRLLKQGIEKKVLNQPATTMIFPGHGPYTNVKNELLTNPFIS
>Mature_209_residues
MDRIRVYTGGVASCNGYLFKTRDNAYVAVDAPSGFADWIYSKKPDIIITDLLITHQHFDHVEDACRMRQIFDCRIHAGQP
YNESLTLEKMARDAWGLPLNVQPFVVDEILTPDIHTANWGGLLWHLHQVPGHSPDSIVYDLPDEGIMFTGDVIFAGSIGR
TDLPGGNLRLLKQGIEKKVLNQPATTMIFPGHGPYTNVKNELLTNPFIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Escherichia coli, GI1787158, Length=208, Percent_Identity=29.3269230769231, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23372; Mature: 23372

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIRVYTGGVASCNGYLFKTRDNAYVAVDAPSGFADWIYSKKPDIIITDLLITHQHFDH
CCEEEEEECCEECCCCEEEEECCCEEEEEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHH
VEDACRMRQIFDCRIHAGQPYNESLTLEKMARDAWGLPLNVQPFVVDEILTPDIHTANWG
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCC
GLLWHLHQVPGHSPDSIVYDLPDEGIMFTGDVIFAGSIGRTDLPGGNLRLLKQGIEKKVL
HHEEEEECCCCCCCCCEEEECCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
NQPATTMIFPGHGPYTNVKNELLTNPFIS
CCCCCEEEECCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MDRIRVYTGGVASCNGYLFKTRDNAYVAVDAPSGFADWIYSKKPDIIITDLLITHQHFDH
CCEEEEEECCEECCCCEEEEECCCEEEEEECCCCHHHHHHCCCCCEEEEHHHHHHHHHHH
VEDACRMRQIFDCRIHAGQPYNESLTLEKMARDAWGLPLNVQPFVVDEILTPDIHTANWG
HHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEHHHHCCCCCCCCCCC
GLLWHLHQVPGHSPDSIVYDLPDEGIMFTGDVIFAGSIGRTDLPGGNLRLLKQGIEKKVL
HHEEEEECCCCCCCCCEEEECCCCCEEEECCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
NQPATTMIFPGHGPYTNVKNELLTNPFIS
CCCCCEEEECCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]