Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pgi [H]
Identifier: 187736457
GI number: 187736457
Start: 2399524
End: 2401071
Strand: Reverse
Name: pgi [H]
Synonym: Amuc_1975
Alternate gene names: 187736457
Gene position: 2401071-2399524 (Counterclockwise)
Preceding gene: 187736458
Following gene: 187736456
Centisome position: 90.13
GC content: 60.79
Gene sequence:
>1548_bases ATGACCATCATGAGCTTATACGCAAAACAACTCGTTCGCTACCCTGAACTGGGCATTTCCCTTGATTTTTCAAAACTTCC GCTGGACGACGCATTCCTGTCTTCCATGCAGGGACGGATAGACAGGGCGTTTGCCGACATGAAGGCGCTGGAATCCGGCG CCATCGCCAATCCGGATGAAAAACGCATGGTGGGGCACTACTGGCTGCGCAACTCCTCCCTGGCTCCCACGCCGGAATTG AAAGCCGCCATTGACGGCCCCCTGGCGGACGTCAAAGCCTTCGGACGGGACGTTCTGGACGGCAAAATAACGCCTCCCCG CGCGGAACAATATTCCGCCGCCCTCGTCATCGGCATCGGCGGTTCCGCTCTTGGCCCGGAGCTGGTGGCGGATGCCATTC CGGCGGCAGGGCTGGACATGTTCTTTCTGGACAACACGGATCCGGACGGCATGTACCGGGTGCTGGAATCCCTCCCTCTG GAAGAAACGCTTGTCATTGTCATTTCCAAATCTGGCGGCACGCCGGAAACCCGCAACGGCATGCTGGTGGCCCAGGACTT CTTCAGGAAGAACGGGCTGGAATTCGCACCCCAGGCGGTCGCCGTCACGGGAACGGGTTCCCGGCTGGACAAAACGGCTG AGGCGGAAGGCTGGCTCAGGCGTTTCCCGATGGAAGACTGGGTGGGCGGCCGCACCTCCGTCATGTCCGTGGTAGGGCTG GTTCCCGCCGTGCTTCAGGGCGTGAACGTGGATGATCTGCTGGAAGGCGCGCGCCTGATGGACGAAAAGACCCGCCGGGA CTGCGTGAAATGCAACGCCTCCATGAAACTGGCGCTGGCCTGGTACAAGGCCACCGGCGGCAAGGGGGAAAAGGATATGG TGGTTCTCCCTTATAAGGATGCCCTGGTGCTCTTCTCCAAATACCTCCAGCAGCTCATTATGGAATCCCTCGGCAAGCGG CTGGACCTGGAGGGCAACGAAGTCTGCCAGGGCATTTCCGTGTACGGCAACAAGGGCTCCACGGATCAGCATGCCTATGT GCAGCAGCTCCGTGACGGCGTGAACAACTTCTTCGCCACCTTCATTGAAGTGCGCGAATGTTCCGCGGATGCGGTGGAAG TGGAAGCGGGCGCCACCTGCGGAGACTTCCTCCAGGGCTTCCTGCGCGGCACCCGCCAGGCTCTGGCGGAATCCGGCCGT TCCTCCATCACCATTTCCATCCCGGAGGTGAACGCCAAAACGCTTGGCATGCTGATTGCTCTGTTTGAGCGCGCCGTCTC CTTCTATGCTTCCCTGGTCAACATCAACGCCTACCACCAGCCCGGCGTGGAAGCCGGCAAAAAAGCGGCGGGTTCCTTCC TGGCCCTGCTGGGCAGGGTAAGGGGGGCTCTGGGAACCGCCCCGGAAACCGCCGCCCAGATGGCTGCCCGGCTGGATGCG GACCAGGAAGCCGTGTACCATTGCCTCGTGCATATAGCTTCCGGTGATTCCTCCGTCAAGTGGGTTCAGGCTGACTGTGC GGATGAAGACACCTTCTGCAAGGCATAA
Upstream 100 bases:
>100_bases CATGGCCAAAGCCCGGGAATGGTTCCAGAAAGCGGCGGACCAGGGCGACGTGCAGGCCAAAAGCATCCTGAAAAAACTCC GGTAACCCTTTTTCCAATCC
Downstream 100 bases:
>100_bases AAAACAGGGCATATTATTTCCGGCGGACGCTTATCCGGTTGATAAGCGTCCGTTTTTCTTTTCCGGACAGCCATGAAAAG AAACTCGCTGCGCTTTTCTT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 515; Mature: 514
Protein sequence:
>515_residues MTIMSLYAKQLVRYPELGISLDFSKLPLDDAFLSSMQGRIDRAFADMKALESGAIANPDEKRMVGHYWLRNSSLAPTPEL KAAIDGPLADVKAFGRDVLDGKITPPRAEQYSAALVIGIGGSALGPELVADAIPAAGLDMFFLDNTDPDGMYRVLESLPL EETLVIVISKSGGTPETRNGMLVAQDFFRKNGLEFAPQAVAVTGTGSRLDKTAEAEGWLRRFPMEDWVGGRTSVMSVVGL VPAVLQGVNVDDLLEGARLMDEKTRRDCVKCNASMKLALAWYKATGGKGEKDMVVLPYKDALVLFSKYLQQLIMESLGKR LDLEGNEVCQGISVYGNKGSTDQHAYVQQLRDGVNNFFATFIEVRECSADAVEVEAGATCGDFLQGFLRGTRQALAESGR SSITISIPEVNAKTLGMLIALFERAVSFYASLVNINAYHQPGVEAGKKAAGSFLALLGRVRGALGTAPETAAQMAARLDA DQEAVYHCLVHIASGDSSVKWVQADCADEDTFCKA
Sequences:
>Translated_515_residues MTIMSLYAKQLVRYPELGISLDFSKLPLDDAFLSSMQGRIDRAFADMKALESGAIANPDEKRMVGHYWLRNSSLAPTPEL KAAIDGPLADVKAFGRDVLDGKITPPRAEQYSAALVIGIGGSALGPELVADAIPAAGLDMFFLDNTDPDGMYRVLESLPL EETLVIVISKSGGTPETRNGMLVAQDFFRKNGLEFAPQAVAVTGTGSRLDKTAEAEGWLRRFPMEDWVGGRTSVMSVVGL VPAVLQGVNVDDLLEGARLMDEKTRRDCVKCNASMKLALAWYKATGGKGEKDMVVLPYKDALVLFSKYLQQLIMESLGKR LDLEGNEVCQGISVYGNKGSTDQHAYVQQLRDGVNNFFATFIEVRECSADAVEVEAGATCGDFLQGFLRGTRQALAESGR SSITISIPEVNAKTLGMLIALFERAVSFYASLVNINAYHQPGVEAGKKAAGSFLALLGRVRGALGTAPETAAQMAARLDA DQEAVYHCLVHIASGDSSVKWVQADCADEDTFCKA >Mature_514_residues TIMSLYAKQLVRYPELGISLDFSKLPLDDAFLSSMQGRIDRAFADMKALESGAIANPDEKRMVGHYWLRNSSLAPTPELK AAIDGPLADVKAFGRDVLDGKITPPRAEQYSAALVIGIGGSALGPELVADAIPAAGLDMFFLDNTDPDGMYRVLESLPLE ETLVIVISKSGGTPETRNGMLVAQDFFRKNGLEFAPQAVAVTGTGSRLDKTAEAEGWLRRFPMEDWVGGRTSVMSVVGLV PAVLQGVNVDDLLEGARLMDEKTRRDCVKCNASMKLALAWYKATGGKGEKDMVVLPYKDALVLFSKYLQQLIMESLGKRL DLEGNEVCQGISVYGNKGSTDQHAYVQQLRDGVNNFFATFIEVRECSADAVEVEAGATCGDFLQGFLRGTRQALAESGRS SITISIPEVNAKTLGMLIALFERAVSFYASLVNINAYHQPGVEAGKKAAGSFLALLGRVRGALGTAPETAAQMAARLDAD QEAVYHCLVHIASGDSSVKWVQADCADEDTFCKA
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=496, Percent_Identity=27.8225806451613, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI296080693, Length=488, Percent_Identity=26.2295081967213, Blast_Score=114, Evalue=2e-25, Organism=Escherichia coli, GI1790457, Length=514, Percent_Identity=29.5719844357977, Blast_Score=148, Evalue=9e-37, Organism=Caenorhabditis elegans, GI71996703, Length=480, Percent_Identity=27.9166666666667, Blast_Score=138, Evalue=6e-33, Organism=Caenorhabditis elegans, GI71996708, Length=480, Percent_Identity=27.9166666666667, Blast_Score=138, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6319673, Length=485, Percent_Identity=28.0412371134021, Blast_Score=130, Evalue=5e-31, Organism=Drosophila melanogaster, GI24651916, Length=497, Percent_Identity=29.5774647887324, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI24651914, Length=497, Percent_Identity=29.5774647887324, Blast_Score=150, Evalue=2e-36, Organism=Drosophila melanogaster, GI17737445, Length=497, Percent_Identity=29.5774647887324, Blast_Score=150, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 55474; Mature: 55343
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIMSLYAKQLVRYPELGISLDFSKLPLDDAFLSSMQGRIDRAFADMKALESGAIANPDE CCHHHHHHHHHHHCCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KRMVGHYWLRNSSLAPTPELKAAIDGPLADVKAFGRDVLDGKITPPRAEQYSAALVIGIG HHHHHHHHEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC GSALGPELVADAIPAAGLDMFFLDNTDPDGMYRVLESLPLEETLVIVISKSGGTPETRNG CCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC MLVAQDFFRKNGLEFAPQAVAVTGTGSRLDKTAEAEGWLRRFPMEDWVGGRTSVMSVVGL EEEEHHHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHH VPAVLQGVNVDDLLEGARLMDEKTRRDCVKCNASMKLALAWYKATGGKGEKDMVVLPYKD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCHH ALVLFSKYLQQLIMESLGKRLDLEGNEVCQGISVYGNKGSTDQHAYVQQLRDGVNNFFAT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHH FIEVRECSADAVEVEAGATCGDFLQGFLRGTRQALAESGRSSITISIPEVNAKTLGMLIA HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFERAVSFYASLVNINAYHQPGVEAGKKAAGSFLALLGRVRGALGTAPETAAQMAARLDA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DQEAVYHCLVHIASGDSSVKWVQADCADEDTFCKA HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC >Mature Secondary Structure TIMSLYAKQLVRYPELGISLDFSKLPLDDAFLSSMQGRIDRAFADMKALESGAIANPDE CHHHHHHHHHHHCCCCCCEECHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH KRMVGHYWLRNSSLAPTPELKAAIDGPLADVKAFGRDVLDGKITPPRAEQYSAALVIGIG HHHHHHHHEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECC GSALGPELVADAIPAAGLDMFFLDNTDPDGMYRVLESLPLEETLVIVISKSGGTPETRNG CCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCC MLVAQDFFRKNGLEFAPQAVAVTGTGSRLDKTAEAEGWLRRFPMEDWVGGRTSVMSVVGL EEEEHHHHHCCCCCCCCCEEEEECCCHHHCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHH VPAVLQGVNVDDLLEGARLMDEKTRRDCVKCNASMKLALAWYKATGGKGEKDMVVLPYKD HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCEEEECCHH ALVLFSKYLQQLIMESLGKRLDLEGNEVCQGISVYGNKGSTDQHAYVQQLRDGVNNFFAT HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHH FIEVRECSADAVEVEAGATCGDFLQGFLRGTRQALAESGRSSITISIPEVNAKTLGMLIA HHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHH LFERAVSFYASLVNINAYHQPGVEAGKKAAGSFLALLGRVRGALGTAPETAAQMAARLDA HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC DQEAVYHCLVHIASGDSSVKWVQADCADEDTFCKA HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA