Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187736442
Identifier: 187736442
GI number: 187736442
Start: 2376040
End: 2376654
Strand: Direct
Name: 187736442
Synonym: Amuc_1960
Alternate gene names: NA
Gene position: 2376040-2376654 (Clockwise)
Preceding gene: 187736441
Following gene: 187736443
Centisome position: 89.19
GC content: 56.91
Gene sequence:
>615_bases ATGAACATTATTCTACCCATCCTGAGCTTTCTGTGCGGTGTCATGCTGACGGAAACAGCTTCCGGCTCTTCTGAGGAGGG AAAGCCTTCTCCCGGCGTAGTGCAGGAATTGTGGTTCGGCATTCCGGGGGCATCCGTAAAGGACCTGACCCACAGGAAGA TTTTTGAAACGGCGGCCCCGGATGTCCGCACGATCAGCCATCTGGATGTGGAAAACCAGGGAGACAGGTACGGAGCCCGT TACTCCGCCCTGCTGAAAGTCCCGGCAAGCGGGAAGTACCGCCTTTACCTGTCTTCCGACGATTCCGCAGAGTTATGGCT GGGCAAGGATGCCACCCAGAAGGACATGGCCTGCATCGCCACCGTCAAAGGATATTCCGACATCCATAATTGGGGCAACC AGCCCAACCAGGCTTCCGAACCTGTCCAGCTGGAAGCTGACCGGTTTTATTTTCTTCAGGTGATTCACAAGGAGGATGGA GGCCCGGACCATATGTCCGTCGCCTGGTCCGGGCCGGGCATCCCCGCCCCTGTCATCATTCCTGCCACGGCGCTGTTCAT ACCGCCCGGTATCTTGCCGGAAGAAAAAAAACAATCCCCAGCCAAAGCGGACTGA
Upstream 100 bases:
>100_bases GGACGGAGGCCATGACCAGGAGGCACCCCGGGAATGACGCCGTTTTTGAAAGGTTGCCCTGGTTCCTGCCGTAGTCGTTG CAGGAAAGGAGTCTCCGGCC
Downstream 100 bases:
>100_bases AAGGTTTTTTGATTACCTTCCCGCCGAGGAGACATCATCAATTTGCCGACGAGAAAATAGATATTTTCCATAAAACTCCA TCAATCAATCATTTCCAATA
Product: PA14 domain protein
Products: NA
Alternate protein names: PA14 Domain-Containing Protein
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD
Sequences:
>Translated_204_residues MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD >Mature_204_residues MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22116; Mature: 22116
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCC DVRTISHLDVENQGDRYGARYSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIA CCHHHEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHEEEE TVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDGGPDHMSVAWSGPGIPAPVII ECCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEE PATALFIPPGILPEEKKQSPAKAD CCHHHHCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCC DVRTISHLDVENQGDRYGARYSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIA CCHHHEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHEEEE TVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDGGPDHMSVAWSGPGIPAPVII ECCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEE PATALFIPPGILPEEKKQSPAKAD CCHHHHCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA