Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736442

Identifier: 187736442

GI number: 187736442

Start: 2376040

End: 2376654

Strand: Direct

Name: 187736442

Synonym: Amuc_1960

Alternate gene names: NA

Gene position: 2376040-2376654 (Clockwise)

Preceding gene: 187736441

Following gene: 187736443

Centisome position: 89.19

GC content: 56.91

Gene sequence:

>615_bases
ATGAACATTATTCTACCCATCCTGAGCTTTCTGTGCGGTGTCATGCTGACGGAAACAGCTTCCGGCTCTTCTGAGGAGGG
AAAGCCTTCTCCCGGCGTAGTGCAGGAATTGTGGTTCGGCATTCCGGGGGCATCCGTAAAGGACCTGACCCACAGGAAGA
TTTTTGAAACGGCGGCCCCGGATGTCCGCACGATCAGCCATCTGGATGTGGAAAACCAGGGAGACAGGTACGGAGCCCGT
TACTCCGCCCTGCTGAAAGTCCCGGCAAGCGGGAAGTACCGCCTTTACCTGTCTTCCGACGATTCCGCAGAGTTATGGCT
GGGCAAGGATGCCACCCAGAAGGACATGGCCTGCATCGCCACCGTCAAAGGATATTCCGACATCCATAATTGGGGCAACC
AGCCCAACCAGGCTTCCGAACCTGTCCAGCTGGAAGCTGACCGGTTTTATTTTCTTCAGGTGATTCACAAGGAGGATGGA
GGCCCGGACCATATGTCCGTCGCCTGGTCCGGGCCGGGCATCCCCGCCCCTGTCATCATTCCTGCCACGGCGCTGTTCAT
ACCGCCCGGTATCTTGCCGGAAGAAAAAAAACAATCCCCAGCCAAAGCGGACTGA

Upstream 100 bases:

>100_bases
GGACGGAGGCCATGACCAGGAGGCACCCCGGGAATGACGCCGTTTTTGAAAGGTTGCCCTGGTTCCTGCCGTAGTCGTTG
CAGGAAAGGAGTCTCCGGCC

Downstream 100 bases:

>100_bases
AAGGTTTTTTGATTACCTTCCCGCCGAGGAGACATCATCAATTTGCCGACGAGAAAATAGATATTTTCCATAAAACTCCA
TCAATCAATCATTTCCAATA

Product: PA14 domain protein

Products: NA

Alternate protein names: PA14 Domain-Containing Protein

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR
YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG
GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD

Sequences:

>Translated_204_residues
MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR
YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG
GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD
>Mature_204_residues
MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAPDVRTISHLDVENQGDRYGAR
YSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIATVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDG
GPDHMSVAWSGPGIPAPVIIPATALFIPPGILPEEKKQSPAKAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22116; Mature: 22116

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DVRTISHLDVENQGDRYGARYSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIA
CCHHHEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHEEEE
TVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDGGPDHMSVAWSGPGIPAPVII
ECCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEE
PATALFIPPGILPEEKKQSPAKAD
CCHHHHCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MNIILPILSFLCGVMLTETASGSSEEGKPSPGVVQELWFGIPGASVKDLTHRKIFETAAP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCC
DVRTISHLDVENQGDRYGARYSALLKVPASGKYRLYLSSDDSAELWLGKDATQKDMACIA
CCHHHEECCCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEEEECCCCCCHHHEEEE
TVKGYSDIHNWGNQPNQASEPVQLEADRFYFLQVIHKEDGGPDHMSVAWSGPGIPAPVII
ECCCCHHHHHCCCCCCCCCCCEEEECCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCEE
PATALFIPPGILPEEKKQSPAKAD
CCHHHHCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA